FFCP PHASE1:Hg19::chr16:19729586..19729643,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124152 | |EntrezGene=124152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28556 | |HGNC=28556 | ||
|TSSclassifier=strong | |||
|UniProt=B4E1V3,B4DXE1 | |UniProt=B4E1V3,B4DXE1 | ||
|association_with_transcript=0bp_to_ENST00000433597,ENST00000541926_5end | |association_with_transcript=0bp_to_ENST00000433597,ENST00000541926_5end | ||
|cluster_id=chr16:19729586..19729643,+ | |||
|description=CAGE_peak_1_at_IQCK_5end | |description=CAGE_peak_1_at_IQCK_5end | ||
|id=chr16:19729586..19729643,+ | |id=chr16:19729586..19729643,+ | ||
|ontology_enrichment_celltype=CL:0000220!1.78e-10!246;CL:0000213!2.26e-10!57;CL:0000215!2.26e-10!57;CL:0002321!4.71e-10!248;CL:0000066!7.48e-09!254;CL:0000222!1.31e-08!119;CL:0000076!6.02e-08!62;CL:0000077!6.74e-08!19 | |ontology_enrichment_celltype=CL:0000220!1.78e-10!246;CL:0000213!2.26e-10!57;CL:0000215!2.26e-10!57;CL:0002321!4.71e-10!248;CL:0000066!7.48e-09!254;CL:0000222!1.31e-08!119;CL:0000076!6.02e-08!62;CL:0000077!6.74e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.94e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.82e-10,58;CL:0000215,2.82e-10,58;CL:0002321,6.97e-10,250;CL:0000066,5.31e-09,253;CL:0000222,2.34e-08,121;CL:0000076,6.49e-08,63;CL:0000077,6.60e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.98e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.85e-26!241;UBERON:0000475!4.29e-23!365;UBERON:0000483!3.57e-22!309;UBERON:0000477!1.05e-21!286;UBERON:0000119!2.01e-21!312;UBERON:0001049!2.59e-21!57;UBERON:0005068!2.59e-21!57;UBERON:0006241!2.59e-21!57;UBERON:0007135!2.59e-21!57;UBERON:0000073!3.17e-21!94;UBERON:0001016!3.17e-21!94;UBERON:0005743!6.24e-21!86;UBERON:0000025!1.08e-20!194;UBERON:0003075!1.61e-20!86;UBERON:0007284!1.61e-20!86;UBERON:0001017!1.63e-20!82;UBERON:0000955!4.87e-20!69;UBERON:0006238!4.87e-20!69;UBERON:0002346!5.73e-20!90;UBERON:0007023!2.25e-19!115;UBERON:0004121!1.28e-18!169;UBERON:0000924!1.85e-18!173;UBERON:0006601!1.85e-18!173;UBERON:0003080!6.43e-18!42;UBERON:0002616!9.83e-18!59;UBERON:0002780!1.09e-17!41;UBERON:0001890!1.09e-17!41;UBERON:0006240!1.09e-17!41;UBERON:0000033!2.05e-17!123;UBERON:0000468!3.43e-17!659;UBERON:0000481!7.65e-17!347;UBERON:0000153!1.41e-16!129;UBERON:0007811!1.41e-16!129;UBERON:0000467!2.87e-16!625;UBERON:0000480!4.81e-16!626;UBERON:0003056!7.95e-15!61;UBERON:0001893!3.05e-14!34;UBERON:0002020!4.76e-14!34;UBERON:0003528!4.76e-14!34;UBERON:0002791!8.98e-14!33;UBERON:0000922!1.16e-13!612;UBERON:0002050!2.24e-13!605;UBERON:0005423!2.24e-13!605;UBERON:0001869!2.99e-13!32;UBERON:0000923!5.14e-13!604;UBERON:0005291!5.14e-13!604;UBERON:0006598!5.14e-13!604;UBERON:0002532!5.14e-13!604;UBERON:0000062!6.98e-11!511;UBERON:0002619!9.57e-10!22;UBERON:0000956!1.23e-09!25;UBERON:0000203!1.23e-09!25;UBERON:0001950!6.96e-09!20;UBERON:0000064!1.60e-08!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.91e-13;41!UBERON:0001890;3.91e-13;41!UBERON:0001893;3.66e-12;34!UBERON:0003528;4.75e-12;34!UBERON:0002020;4.75e-12;34!UBERON:0001869;5.35e-12;32!UBERON:0002791;5.46e-12;32!UBERON:0000073;1.04e-11;53!UBERON:0002616;1.04e-11;53!UBERON:0002619;1.15e-09;22!UBERON:0000956;1.41e-09;25!UBERON:0000203;1.41e-09;25!UBERON:0000955;1.51e-09;68!UBERON:0001017;4.14e-09;75!UBERON:0001950;8.88e-09;20!UBERON:0001016;1.34e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.49e-26,240;UBERON:0001049,4.30e-21,56;UBERON:0005068,4.30e-21,56;UBERON:0006241,4.30e-21,56;UBERON:0007135,4.30e-21,56;UBERON:0000025,7.80e-21,192;UBERON:0001016,1.54e-20,89;UBERON:0000483,2.37e-20,306;UBERON:0001017,2.81e-20,81;UBERON:0000955,8.32e-20,68;UBERON:0006238,8.32e-20,68;UBERON:0000119,1.24e-19,309;UBERON:0000073,1.48e-19,53;UBERON:0002616,1.48e-19,53;UBERON:0007023,5.35e-19,114;UBERON:0003075,3.23e-18,82;UBERON:0007284,3.23e-18,82;UBERON:0002346,1.03e-17,86;UBERON:0002780,1.04e-17,41;UBERON:0001890,1.04e-17,41;UBERON:0003080,1.04e-17,41;UBERON:0006240,1.04e-17,41;UBERON:0004121,3.25e-17,171;UBERON:0000924,3.25e-17,171;UBERON:0006601,3.25e-17,171;UBERON:0010371,6.03e-16,104;UBERON:0010314,1.76e-15,132;UBERON:0011216,1.97e-15,223;UBERON:0003056,1.22e-14,61;UBERON:0001893,2.93e-14,34;UBERON:0003528,4.57e-14,34;UBERON:0002020,4.57e-14,34;UBERON:0000922,2.53e-13,592;UBERON:0001869,2.88e-13,32;UBERON:0002791,3.48e-13,32;UBERON:0005423,4.82e-13,581;UBERON:0002050,4.23e-11,564;UBERON:0000923,7.59e-11,560;UBERON:0010316,7.59e-11,560;UBERON:0005291,7.59e-11,560;UBERON:0006598,7.59e-11,560;UBERON:0010317,7.59e-11,560;UBERON:0002532,7.59e-11,560;UBERON:0002619,9.32e-10,22;UBERON:0000956,1.20e-09,25;UBERON:0000203,1.20e-09,25;UBERON:0001950,6.80e-09,20 | |||
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| ||
|short_description=p1@IQCK | |short_description=p1@IQCK | ||
}} | }} |
Latest revision as of 00:16, 25 September 2015
Short description: | p1@IQCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IQCK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000433597, ENST00000541926_5end |
EntrezGene: | IQCK |
HGNC: | 28556 |
UniProt: | B4E1V3B4DXE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.82e-10 | 58 |
barrier cell | 2.82e-10 | 58 |
embryonic cell | 6.97e-10 | 250 |
epithelial cell | 5.31e-09 | 253 |
mesodermal cell | 2.34e-08 | 121 |
squamous epithelial cell | 6.49e-08 | 63 |
mesothelial cell | 6.60e-08 | 19 |