FFCP PHASE1:Hg19::chr12:71031185..71031215,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5787 | |EntrezGene=5787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9665 | |HGNC=9665 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0Y4,Q6ZR19,F8VU56,F8VSD5 | |UniProt=F5H0Y4,Q6ZR19,F8VU56,F8VSD5 | ||
|association_with_transcript=0bp_to_ENST00000538174,ENST00000544694,ENST00000548122,ENST00000550358,ENST00000551525_5end | |association_with_transcript=0bp_to_ENST00000538174,ENST00000544694,ENST00000548122,ENST00000550358,ENST00000551525_5end | ||
|cluster_id=chr12:71031185..71031215,- | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_1_at_PTPRB_5end | |description=CAGE_peak_1_at_PTPRB_5end | ||
|id=chr12:71031185..71031215,- | |id=chr12:71031185..71031215,- | ||
|ontology_enrichment_celltype=CL:0002139!5.53e-29!24;CL:0000115!2.84e-26!35;CL:0000071!7.14e-22!18;CL:0002546!7.14e-22!18;CL:0002078!1.44e-19!44;CL:1000413!7.39e-12!9;CL:0000213!1.05e-11!57;CL:0000215!1.05e-11!57;CL:0005020!1.18e-08!6;CL:0002138!1.18e-08!6;CL:0005022!1.18e-08!6;CL:0002544!1.75e-08!6;CL:0002543!2.80e-08!6 | |ontology_enrichment_celltype=CL:0002139!5.53e-29!24;CL:0000115!2.84e-26!35;CL:0000071!7.14e-22!18;CL:0002546!7.14e-22!18;CL:0002078!1.44e-19!44;CL:1000413!7.39e-12!9;CL:0000213!1.05e-11!57;CL:0000215!1.05e-11!57;CL:0005020!1.18e-08!6;CL:0002138!1.18e-08!6;CL:0005022!1.18e-08!6;CL:0002544!1.75e-08!6;CL:0002543!2.80e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.08e-32;24!CL:0000115;1.85e-26;36!CL:0000071;1.28e-24;18!CL:0002078;1.03e-14;45!CL:1000413;3.04e-13;9!CL:0000213;5.13e-10;58!CL:0000215;5.13e-10;58!CL:0002138;1.33e-09;6!CL:0002544;2.06e-09;6!CL:0002543;3.47e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.09e-32,24;CL:0000115,3.06e-31,36;CL:0000071,1.30e-24,18;CL:0002546,1.30e-24,18;CL:0002078,1.33e-22,45;CL:0000213,4.96e-15,58;CL:0000215,4.96e-15,58;CL:1000413,3.05e-13,9;CL:0005020,1.31e-09,6;CL:0002138,1.31e-09,6;CL:0005022,1.31e-09,6;CL:0002544,2.05e-09,6;CL:0002543,3.48e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.28e-24;18!CL:0005022;1.33e-09;6!UBERON:0006601;1.43e-07;82!UBERON:0004872;6.02e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-61!115;UBERON:0004111!5.19e-31!241;UBERON:0000025!1.47e-28!194;UBERON:0000477!5.10e-27!286;UBERON:0001049!1.10e-25!57;UBERON:0005068!1.10e-25!57;UBERON:0006241!1.10e-25!57;UBERON:0007135!1.10e-25!57;UBERON:0003080!7.02e-22!42;UBERON:0001986!7.14e-22!18;UBERON:0004638!7.14e-22!18;UBERON:0004852!7.14e-22!18;UBERON:0002780!5.34e-21!41;UBERON:0001890!5.34e-21!41;UBERON:0006240!5.34e-21!41;UBERON:0002616!1.12e-20!59;UBERON:0003075!8.56e-19!86;UBERON:0007284!8.56e-19!86;UBERON:0001017!4.74e-18!82;UBERON:0000955!5.46e-18!69;UBERON:0006238!5.46e-18!69;UBERON:0005743!1.46e-17!86;UBERON:0002346!3.24e-17!90;UBERON:0002020!4.96e-17!34;UBERON:0003528!4.96e-17!34;UBERON:0001893!8.91e-17!34;UBERON:0000487!1.53e-16!22;UBERON:0002791!2.98e-16!33;UBERON:0001869!1.06e-15!32;UBERON:0000073!4.62e-15!94;UBERON:0001016!4.62e-15!94;UBERON:0000483!6.64e-15!309;UBERON:0000119!1.88e-14!312;UBERON:0002619!5.14e-14!22;UBERON:0006914!1.06e-13!25;UBERON:0001950!1.00e-12!20;UBERON:0003056!1.31e-12!61;UBERON:0003915!7.39e-12!9;UBERON:0004700!7.39e-12!9;UBERON:0001917!7.39e-12!9;UBERON:0000956!1.22e-11!25;UBERON:0000203!1.22e-11!25;UBERON:0000055!1.60e-11!69;UBERON:0000468!3.43e-11!659;UBERON:0000467!6.57e-11!625;UBERON:0000480!8.19e-11!626;UBERON:0000153!1.05e-10!129;UBERON:0007811!1.05e-10!129;UBERON:0004872!3.81e-10!84;UBERON:0000033!1.71e-09!123;UBERON:0003914!4.61e-09!118;UBERON:0002049!1.15e-08!79;UBERON:0007798!1.15e-08!79;UBERON:0001981!2.15e-08!60;UBERON:0007500!2.15e-08!60;UBERON:0004537!2.15e-08!60;UBERON:0006965!2.15e-08!60;UBERON:0000481!2.48e-08!347;UBERON:0000922!2.91e-08!612;UBERON:0001009!3.85e-08!113;UBERON:0004121!7.66e-08!169;UBERON:0002050!1.18e-07!605;UBERON:0005423!1.18e-07!605;UBERON:0002465!2.07e-07!10;UBERON:0003103!2.46e-07!69;UBERON:0000924!2.63e-07!173;UBERON:0006601!2.63e-07!173;UBERON:0000923!2.68e-07!604;UBERON:0005291!2.68e-07!604;UBERON:0006598!2.68e-07!604;UBERON:0002532!2.68e-07!604;UBERON:0000064!4.81e-07!219;UBERON:0002308!4.86e-07!9;UBERON:0000125!4.86e-07!9;UBERON:0004535!4.99e-07!110;UBERON:0002298!6.13e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.28e-24;18!UBERON:0001986;1.28e-24;18!UBERON:0004852;1.28e-24;18!UBERON:0000487;7.23e-19;22!UBERON:0007023;9.36e-17;114!UBERON:0006914;8.62e-16;25!UBERON:0002780;4.03e-14;41!UBERON:0001890;4.03e-14;41!UBERON:0003915;3.04e-13;9!UBERON:0004700;3.04e-13;9!UBERON:0001917;3.04e-13;9!UBERON:0000073;1.53e-12;53!UBERON:0002616;1.53e-12;53!UBERON:0003528;3.35e-12;34!UBERON:0002020;3.35e-12;34!UBERON:0001893;5.74e-12;34!UBERON:0002791;9.54e-12;32!UBERON:0001869;9.87e-12;32!UBERON:0002619;1.42e-10;22!UBERON:0000490;1.02e-09;33!UBERON:0001950;3.52e-09;20!UBERON:0000956;8.31e-09;25!UBERON:0000203;8.31e-09;25!UBERON:0002465;2.40e-08;10!UBERON:0000125;8.52e-08;9!UBERON:0002308;8.52e-08;9!UBERON:0001638;1.82e-07;9!UBERON:0003920;1.82e-07;9!UBERON:0004582;1.82e-07;9!UBERON:0001017;3.09e-07;75!UBERON:0000055;3.99e-07;65!UBERON:0000955;5.75e-07;68!UBERON:0001473;7.73e-07;8!UBERON:0004536;7.73e-07;8!UBERON:0006558;7.73e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.63e-64,114;UBERON:0004111,2.48e-30,240;UBERON:0000025,1.10e-26,192;UBERON:0004638,1.30e-24,18;UBERON:0001986,1.30e-24,18;UBERON:0004852,1.30e-24,18;UBERON:0001049,1.68e-23,56;UBERON:0005068,1.68e-23,56;UBERON:0006241,1.68e-23,56;UBERON:0007135,1.68e-23,56;UBERON:0000073,1.38e-21,53;UBERON:0002616,1.38e-21,53;UBERON:0000487,7.34e-19,22;UBERON:0002780,9.43e-19,41;UBERON:0001890,9.43e-19,41;UBERON:0003080,9.43e-19,41;UBERON:0006240,9.43e-19,41;UBERON:0003075,2.20e-16,82;UBERON:0007284,2.20e-16,82;UBERON:0006914,8.73e-16,25;UBERON:0000955,8.81e-16,68;UBERON:0006238,8.81e-16,68;UBERON:0001017,1.25e-15,81;UBERON:0002346,5.27e-15,86;UBERON:0003528,1.94e-14,34;UBERON:0002020,1.94e-14,34;UBERON:0010314,3.38e-14,132;UBERON:0001893,3.43e-14,34;UBERON:0003915,3.05e-13,9;UBERON:0004700,3.05e-13,9;UBERON:0001917,3.05e-13,9;UBERON:0000483,3.93e-13,306;UBERON:0002791,4.77e-13,32;UBERON:0001869,4.97e-13,32;UBERON:0000055,5.46e-13,68;UBERON:0001016,8.09e-13,89;UBERON:0000119,9.47e-13,309;UBERON:0011216,1.39e-11,223;UBERON:0004872,4.58e-11,83;UBERON:0010371,5.50e-11,104;UBERON:0003056,1.13e-10,61;UBERON:0002619,1.59e-10,22;UBERON:0002049,5.46e-10,78;UBERON:0007798,5.46e-10,78;UBERON:0003914,1.97e-09,117;UBERON:0001009,2.27e-09,112;UBERON:0007500,2.55e-09,59;UBERON:0001981,2.55e-09,59;UBERON:0004537,2.55e-09,59;UBERON:0006965,2.55e-09,59;UBERON:0001950,3.60e-09,20;UBERON:0002050,5.15e-09,564;UBERON:0000923,7.60e-09,560;UBERON:0010316,7.60e-09,560;UBERON:0005291,7.60e-09,560;UBERON:0006598,7.60e-09,560;UBERON:0010317,7.60e-09,560;UBERON:0002532,7.60e-09,560;UBERON:0000956,9.11e-09,25;UBERON:0000203,9.11e-09,25;UBERON:0000922,9.78e-09,592;UBERON:0005423,1.18e-08,581;UBERON:0002465,2.43e-08,10;UBERON:0004535,4.41e-08,109;UBERON:0000125,8.84e-08,9;UBERON:0002308,8.84e-08,9;UBERON:0001638,1.81e-07,9;UBERON:0003920,1.81e-07,9;UBERON:0004582,1.81e-07,9;UBERON:0003103,4.39e-07,68;UBERON:0001473,7.67e-07,8;UBERON:0004536,7.67e-07,8;UBERON:0006558,7.67e-07,8 | |||
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| ||
|short_description=p1@PTPRB | |short_description=p1@PTPRB | ||
}} | }} |
Latest revision as of 16:03, 24 September 2015
Short description: | p1@PTPRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTPRB_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 0bp_to_ENST00000538174, ENST00000544694, ENST00000548122, ENST00000550358, ENST00000551525_5end |
EntrezGene: | PTPRB |
HGNC: | 9665 |
UniProt: | F5H0Y4Q6ZR19F8VU56F8VSD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.09e-32 | 24 |
endothelial cell | 3.06e-31 | 36 |
blood vessel endothelial cell | 1.30e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.30e-24 | 18 |
meso-epithelial cell | 1.33e-22 | 45 |
lining cell | 4.96e-15 | 58 |
barrier cell | 4.96e-15 | 58 |
endothelial cell of artery | 3.05e-13 | 9 |
lymphangioblast | 1.31e-09 | 6 |
endothelial cell of lymphatic vessel | 1.31e-09 | 6 |
vascular lymphangioblast | 1.31e-09 | 6 |
aortic endothelial cell | 2.05e-09 | 6 |
vein endothelial cell | 3.48e-09 | 6 |