FFCP PHASE1:Hg19::chr11:63448962..63448982,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10313 | |EntrezGene=10313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10469 | |HGNC=10469 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z4M1,F5H774,F5H891,F5GWG7 | |UniProt=B7Z4M1,F5H774,F5H891,F5GWG7 | ||
|association_with_transcript=0bp_to_ENST00000536011,ENST00000537981,ENST00000540798,ENST00000543123,ENST00000543552,ENST00000545432_5end | |||
|cluster_id=chr11:63448962..63448982,+ | |||
|description=CAGE_peak_1_at_RTN3_5end | |||
|id=chr11:63448962..63448982,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.59e-12!76;CL:0002194!3.28e-10!63;CL:0000576!3.28e-10!63;CL:0000040!3.28e-10!63;CL:0000559!3.28e-10!63;CL:0002009!1.27e-09!65;CL:0000860!4.36e-08!45;CL:0000839!4.70e-08!70;CL:0000557!5.55e-08!71;CL:0000763!1.88e-07!112;CL:0000049!1.88e-07!112;CL:0002057!4.50e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.41e-11,72;CL:0002194,2.60e-09,59;CL:0000576,2.60e-09,59;CL:0000040,2.60e-09,59;CL:0000559,2.60e-09,59;CL:0002009,9.60e-09,61;CL:0000473,1.64e-08,48;CL:0000234,1.64e-08,48;CL:0000839,3.10e-07,66;CL:0000557,3.62e-07,67;CL:0000860,4.50e-07,42;CL:0002057,4.50e-07,42;CL:0000763,9.69e-07,108;CL:0000049,9.69e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.09e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.15e-29!82;UBERON:0000073!2.78e-29!94;UBERON:0001016!2.78e-29!94;UBERON:0005743!1.75e-28!86;UBERON:0001049!6.47e-28!57;UBERON:0005068!6.47e-28!57;UBERON:0006241!6.47e-28!57;UBERON:0007135!6.47e-28!57;UBERON:0000955!2.42e-24!69;UBERON:0006238!2.42e-24!69;UBERON:0002616!5.24e-23!59;UBERON:0003080!3.84e-22!42;UBERON:0002780!5.10e-22!41;UBERON:0001890!5.10e-22!41;UBERON:0006240!5.10e-22!41;UBERON:0001893!2.41e-19!34;UBERON:0002020!3.19e-19!34;UBERON:0003528!3.19e-19!34;UBERON:0002791!1.15e-18!33;UBERON:0002346!2.46e-18!90;UBERON:0001869!4.27e-18!32;UBERON:0003075!2.73e-17!86;UBERON:0007284!2.73e-17!86;UBERON:0003056!2.87e-14!61;UBERON:0000956!4.48e-14!25;UBERON:0000203!4.48e-14!25;UBERON:0002619!6.00e-14!22;UBERON:0001950!8.65e-13!20;UBERON:0000924!1.45e-12!173;UBERON:0006601!1.45e-12!173;UBERON:0000033!4.90e-12!123;UBERON:0000468!9.40e-12!659;UBERON:0004121!1.02e-11!169;UBERON:0007023!7.45e-11!115;UBERON:0000153!1.11e-10!129;UBERON:0007811!1.11e-10!129;UBERON:0000922!2.37e-10!612;UBERON:0000467!6.45e-10!625;UBERON:0000923!7.79e-10!604;UBERON:0005291!7.79e-10!604;UBERON:0006598!7.79e-10!604;UBERON:0002532!7.79e-10!604;UBERON:0000480!7.88e-10!626;UBERON:0002050!1.52e-09!605;UBERON:0005423!1.52e-09!605;UBERON:0000062!1.85e-08!511;UBERON:0002390!1.70e-07!102;UBERON:0003061!1.70e-07!102;UBERON:0002371!3.78e-07!80;UBERON:0001474!3.88e-07!86;UBERON:0003076!5.29e-07!15;UBERON:0003057!5.29e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.02e-17;34!UBERON:0003528;1.86e-16;34!UBERON:0002020;1.86e-16;34!UBERON:0001869;2.80e-16;32!UBERON:0002791;3.14e-16;32!UBERON:0002780;7.88e-16;41!UBERON:0001890;7.88e-16;41!UBERON:0000073;1.33e-15;53!UBERON:0002616;1.33e-15;53!UBERON:0000956;4.54e-14;25!UBERON:0000203;4.54e-14;25!UBERON:0002619;6.08e-14;22!UBERON:0001950;8.77e-13;20!UBERON:0001017;6.67e-12;75!UBERON:0000955;2.46e-11;68!UBERON:0001016;2.81e-10;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.65e-30,89;UBERON:0001017,1.81e-29,81;UBERON:0001049,9.03e-28,56;UBERON:0005068,9.03e-28,56;UBERON:0006241,9.03e-28,56;UBERON:0007135,9.03e-28,56;UBERON:0000073,4.55e-26,53;UBERON:0002616,4.55e-26,53;UBERON:0000955,3.73e-24,68;UBERON:0006238,3.73e-24,68;UBERON:0002780,5.10e-22,41;UBERON:0001890,5.10e-22,41;UBERON:0003080,5.10e-22,41;UBERON:0006240,5.10e-22,41;UBERON:0001893,2.41e-19,34;UBERON:0003528,3.19e-19,34;UBERON:0002020,3.19e-19,34;UBERON:0001869,4.27e-18,32;UBERON:0002346,4.37e-18,86;UBERON:0002791,4.90e-18,32;UBERON:0003075,4.83e-17,82;UBERON:0007284,4.83e-17,82;UBERON:0003056,2.39e-14,61;UBERON:0000956,4.48e-14,25;UBERON:0000203,4.48e-14,25;UBERON:0002619,6.00e-14,22;UBERON:0001950,8.65e-13,20;UBERON:0004121,3.97e-12,171;UBERON:0000924,3.97e-12,171;UBERON:0006601,3.97e-12,171;UBERON:0011216,7.79e-12,223;UBERON:0007023,1.87e-10,114;UBERON:0010371,2.43e-10,104;UBERON:0000923,7.35e-09,560;UBERON:0010316,7.35e-09,560;UBERON:0005291,7.35e-09,560;UBERON:0006598,7.35e-09,560;UBERON:0010317,7.35e-09,560;UBERON:0002532,7.35e-09,560;UBERON:0005423,2.14e-08,581;UBERON:0000922,2.68e-08,592;UBERON:0002050,2.81e-08,564;UBERON:0010314,2.36e-07,132;UBERON:0003076,5.29e-07,15;UBERON:0003057,5.29e-07,15;UBERON:0002390,9.13e-07,98;UBERON:0003061,9.13e-07,98 | |||
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1,21.7986574766198 | ||
|short_description=p1@RTN3 | |||
}} | }} |
Latest revision as of 00:05, 19 September 2015
Short description: | p1@RTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RTN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536011, ENST00000537981, ENST00000540798, ENST00000543123, ENST00000543552, ENST00000545432_5end |
EntrezGene: | RTN3 |
HGNC: | 10469 |
UniProt: | B7Z4M1F5H774F5H891F5GWG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.41e-11 | 72 |
monopoietic cell | 2.60e-09 | 59 |
monocyte | 2.60e-09 | 59 |
monoblast | 2.60e-09 | 59 |
promonocyte | 2.60e-09 | 59 |
macrophage dendritic cell progenitor | 9.60e-09 | 61 |
defensive cell | 1.64e-08 | 48 |
phagocyte | 1.64e-08 | 48 |
myeloid lineage restricted progenitor cell | 3.10e-07 | 66 |
granulocyte monocyte progenitor cell | 3.62e-07 | 67 |
classical monocyte | 4.50e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.50e-07 | 42 |
myeloid cell | 9.69e-07 | 108 |
common myeloid progenitor | 9.69e-07 | 108 |