FFCP PHASE1:Hg19::chr21:27425581..27425626,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=191bp_to_ENST00000463070_5end | |association_with_transcript=191bp_to_ENST00000463070_5end | ||
|cluster_id=chr21:27425581..27425626,- | |||
|coexpression_cluster_id=C1073 | |||
|description=CAGE_peak_6_at_APP_5end | |description=CAGE_peak_6_at_APP_5end | ||
|id=chr21:27425581..27425626,- | |id=chr21:27425581..27425626,- | ||
|ontology_enrichment_celltype=CL:0000066!1.60e-07!254 | |ontology_enrichment_celltype=CL:0000066!1.60e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.06e-21!57;UBERON:0005068!2.06e-21!57;UBERON:0006241!2.06e-21!57;UBERON:0007135!2.06e-21!57;UBERON:0004111!7.67e-21!241;UBERON:0000468!8.00e-21!659;UBERON:0007023!3.22e-19!115;UBERON:0000477!6.65e-19!286;UBERON:0002616!9.99e-18!59;UBERON:0000467!1.02e-17!625;UBERON:0000922!1.33e-17!612;UBERON:0005743!1.53e-17!86;UBERON:0002780!1.62e-17!41;UBERON:0001890!1.62e-17!41;UBERON:0006240!1.62e-17!41;UBERON:0000480!2.29e-17!626;UBERON:0001017!2.63e-17!82;UBERON:0003080!5.37e-17!42;UBERON:0000025!1.01e-16!194;UBERON:0000073!1.38e-16!94;UBERON:0001016!1.38e-16!94;UBERON:0002020!2.88e-16!34;UBERON:0003528!2.88e-16!34;UBERON:0002050!6.13e-16!605;UBERON:0005423!6.13e-16!605;UBERON:0000923!1.55e-15!604;UBERON:0005291!1.55e-15!604;UBERON:0006598!1.55e-15!604;UBERON:0002532!1.55e-15!604;UBERON:0001893!1.77e-15!34;UBERON:0000955!1.79e-15!69;UBERON:0006238!1.79e-15!69;UBERON:0002346!2.82e-15!90;UBERON:0002791!3.53e-15!33;UBERON:0001869!9.15e-15!32;UBERON:0003075!1.11e-14!86;UBERON:0007284!1.11e-14!86;UBERON:0000924!1.38e-14!173;UBERON:0006601!1.38e-14!173;UBERON:0000483!3.00e-14!309;UBERON:0000119!4.88e-14!312;UBERON:0004121!5.60e-14!169;UBERON:0000481!3.13e-13!347;UBERON:0002619!4.04e-13!22;UBERON:0000033!1.98e-12!123;UBERON:0000062!3.43e-12!511;UBERON:0001950!8.10e-12!20;UBERON:0000956!1.11e-11!25;UBERON:0000203!1.11e-11!25;UBERON:0000153!2.86e-11!129;UBERON:0007811!2.86e-11!129;UBERON:0003056!2.96e-10!61;UBERON:0000475!4.54e-10!365;UBERON:0000064!5.21e-10!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.18e-16;34!UBERON:0002020;5.18e-16;34!UBERON:0002791;8.48e-16;32!UBERON:0001869;1.77e-15;32!UBERON:0001893;5.51e-15;34!UBERON:0002619;9.55e-15;22!UBERON:0002780;3.46e-14;41!UBERON:0001890;3.46e-14;41!UBERON:0000956;2.18e-13;25!UBERON:0000203;2.18e-13;25!UBERON:0001950;3.09e-13;20!UBERON:0000073;9.70e-13;53!UBERON:0002616;9.70e-13;53!UBERON:0000955;3.36e-08;68!UBERON:0001017;8.45e-08;75!UBERON:0002420;3.70e-07;9!UBERON:0007245;3.70e-07;9!UBERON:0010009;3.70e-07;9!UBERON:0010011;3.70e-07;9!UBERON:0000454;3.70e-07;9!UBERON:0000125;4.98e-07;9!UBERON:0002308;4.98e-07;9!UBERON:0001016;5.66e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.26e-24,56;UBERON:0005068,3.26e-24,56;UBERON:0006241,3.26e-24,56;UBERON:0007135,3.26e-24,56;UBERON:0000073,2.32e-22,53;UBERON:0002616,2.32e-22,53;UBERON:0004111,6.03e-21,240;UBERON:0002780,1.02e-19,41;UBERON:0001890,1.02e-19,41;UBERON:0003080,1.02e-19,41;UBERON:0006240,1.02e-19,41;UBERON:0007023,3.95e-19,114;UBERON:0001017,1.14e-18,81;UBERON:0003528,2.87e-18,34;UBERON:0002020,2.87e-18,34;UBERON:0001893,2.30e-17,34;UBERON:0002346,6.01e-17,86;UBERON:0002791,6.99e-17,32;UBERON:0000955,1.19e-16,68;UBERON:0006238,1.19e-16,68;UBERON:0001869,1.52e-16,32;UBERON:0000025,2.07e-16,192;UBERON:0001016,2.34e-16,89;UBERON:0010371,2.60e-16,104;UBERON:0003075,2.86e-16,82;UBERON:0007284,2.86e-16,82;UBERON:0010314,5.79e-15,132;UBERON:0002619,7.31e-15,22;UBERON:0004121,1.28e-13,171;UBERON:0000924,1.28e-13,171;UBERON:0006601,1.28e-13,171;UBERON:0001950,2.30e-13,20;UBERON:0000956,5.33e-13,25;UBERON:0000203,5.33e-13,25;UBERON:0000922,1.03e-11,592;UBERON:0000483,1.15e-11,306;UBERON:0003056,1.56e-11,61;UBERON:0011216,2.00e-11,223;UBERON:0000119,2.01e-11,309;UBERON:0005423,3.84e-10,581;UBERON:0002050,9.98e-10,564;UBERON:0000923,3.99e-09,560;UBERON:0010316,3.99e-09,560;UBERON:0005291,3.99e-09,560;UBERON:0006598,3.99e-09,560;UBERON:0010317,3.99e-09,560;UBERON:0002532,3.99e-09,560;UBERON:0002420,6.25e-07,9;UBERON:0007245,6.25e-07,9;UBERON:0010009,6.25e-07,9;UBERON:0010011,6.25e-07,9;UBERON:0000454,6.25e-07,9;UBERON:0000125,8.23e-07,9;UBERON:0002308,8.23e-07,9 | |||
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| ||
|short_description=p6@APP | |short_description=p6@APP | ||
}} | }} |
Latest revision as of 23:03, 17 September 2015
Short description: | p6@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_APP_5end |
Coexpression cluster: | C1073_olfactory_Prostate_Cardiac_medial_occipital_seminal_diencephalon |
Association with transcript: | 191bp_to_ENST00000463070_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data