FFCP PHASE1:Hg19::chr16:23847267..23847335,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:23847267..23847335,+
|short_description=p1@PRKCB
|description=CAGE_peak_1_at_PRKCB_5end
|association_with_transcript=0bp_to_ENST00000321728,NM_002738,NM_2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5579 | |EntrezGene=5579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9395 | |HGNC=9395 | ||
|TSSclassifier=strong | |||
|UniProt=P05771 | |UniProt=P05771 | ||
|association_with_transcript=0bp_to_ENST00000321728,NM_002738,NM_212535,uc002dmd.2,uc002dme.2_5end | |||
|cluster_id=chr16:23847267..23847335,+ | |||
|coexpression_cluster_id=C2366 | |||
|description=CAGE_peak_1_at_PRKCB_5end | |||
|id=chr16:23847267..23847335,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.48e-63!172;CL:0000566!2.48e-63!172;CL:0002032!1.07e-59!165;CL:0000837!1.07e-59!165;CL:0000988!1.31e-59!182;CL:0000738!5.32e-50!140;CL:0002031!6.82e-41!124;CL:0002087!3.42e-39!119;CL:0000763!1.03e-37!112;CL:0000049!1.03e-37!112;CL:0000766!3.60e-25!76;CL:0000557!3.21e-22!71;CL:0000839!2.80e-20!70;CL:0002009!1.71e-19!65;CL:0002057!4.00e-19!42;CL:0000542!9.24e-19!53;CL:0000051!9.24e-19!53;CL:0000838!1.74e-18!52;CL:0002194!2.93e-18!63;CL:0000576!2.93e-18!63;CL:0000040!2.93e-18!63;CL:0000559!2.93e-18!63;CL:0000860!6.85e-17!45;CL:0000945!2.55e-12!24;CL:0000826!2.55e-12!24;CL:0000236!1.63e-08!14;CL:0000791!7.40e-08!18;CL:0000789!7.40e-08!18;CL:0002420!7.40e-08!18;CL:0002419!7.40e-08!18;CL:0000790!7.40e-08!18;CL:0000084!9.99e-07!25;CL:0000827!9.99e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000576;5.97e-14;48!CL:0000860;7.92e-14;33!CL:0002057;7.92e-14;33!CL:0000766;2.78e-13;69!CL:0000945;3.56e-13;24!CL:0000473;6.41e-13;39!CL:0000234;6.41e-13;39!CL:0002087;6.46e-13;104!CL:0000763;1.45e-12;100!CL:0000738;8.74e-12;136!CL:0000542;9.01e-12;53!CL:0000988;2.74e-11;177!CL:0000236;1.50e-08;13!CL:0000791;2.65e-08;18!CL:0000789;2.65e-08;18!CL:0002419;2.65e-08;18!CL:0000084;3.28e-07;25!CL:0000094;4.79e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.32e-71,168;CL:0000988,2.90e-67,177;CL:0002032,7.85e-67,161;CL:0000837,7.85e-67,161;CL:0000738,4.43e-57,136;CL:0002031,3.86e-47,120;CL:0002087,2.56e-45,115;CL:0000763,6.39e-43,108;CL:0000049,6.39e-43,108;CL:0000766,4.43e-30,72;CL:0000557,8.58e-27,67;CL:0000839,1.52e-24,66;CL:0002009,8.81e-24,61;CL:0002194,2.20e-22,59;CL:0000576,2.20e-22,59;CL:0000040,2.20e-22,59;CL:0000559,2.20e-22,59;CL:0000473,9.79e-22,48;CL:0000234,9.79e-22,48;CL:0000860,2.31e-20,42;CL:0002057,2.31e-20,42;CL:0000542,3.20e-20,53;CL:0000051,3.20e-20,53;CL:0000838,6.30e-20,52;CL:0000945,3.58e-13,24;CL:0000826,3.58e-13,24;CL:0000236,4.17e-09,14;CL:0000791,2.66e-08,18;CL:0000789,2.66e-08,18;CL:0002420,2.66e-08,18;CL:0002419,2.66e-08,18;CL:0000790,2.66e-08,18;CL:0000084,3.18e-07,25;CL:0000827,3.18e-07,25;CL:0000094,4.79e-07,8;CL:0002393,7.04e-07,9;CL:0002397,7.04e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.34e-15;42!CL:0000049;7.30e-12;108!CL:0000051;9.01e-12;53!CL:0000790;2.65e-08;18 | |||
|ontology_enrichment_disease=DOID:8692!3.53e-11!31;DOID:2531!8.76e-11!51;DOID:0060083!8.76e-11!51;DOID:1240!2.06e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.58e-11;31!DOID:1240;1.33e-08;39!DOID:2531;3.25e-07;51!DOID:0060083;3.25e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.53e-11,31;DOID:2531,2.53e-11,51;DOID:0060083,2.53e-11,51;DOID:1240,1.04e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.18e-29!115;UBERON:0002390!1.03e-28!102;UBERON:0003061!1.03e-28!102;UBERON:0002193!2.50e-24!112;UBERON:0002371!4.56e-18!80;UBERON:0001474!1.35e-15!86;UBERON:0001049!2.75e-15!57;UBERON:0005068!2.75e-15!57;UBERON:0006241!2.75e-15!57;UBERON:0007135!2.75e-15!57;UBERON:0003080!2.26e-14!42;UBERON:0002780!2.47e-14!41;UBERON:0001890!2.47e-14!41;UBERON:0006240!2.47e-14!41;UBERON:0001893!1.20e-13!34;UBERON:0001869!1.93e-13!32;UBERON:0002020!3.65e-13!34;UBERON:0003528!3.65e-13!34;UBERON:0002791!4.71e-13!33;UBERON:0002405!1.27e-12!115;UBERON:0002616!4.15e-12!59;UBERON:0002619!2.39e-11!22;UBERON:0005743!4.47e-11!86;UBERON:0001017!5.28e-11!82;UBERON:0001950!7.26e-11!20;UBERON:0004765!2.62e-10!101;UBERON:0001434!2.62e-10!101;UBERON:0000073!4.52e-10!94;UBERON:0001016!4.52e-10!94;UBERON:0000955!9.98e-10!69;UBERON:0006238!9.98e-10!69;UBERON:0000956!1.01e-09!25;UBERON:0000203!1.01e-09!25;UBERON:0002346!1.76e-09!90;UBERON:0000178!4.61e-09!15;UBERON:0000179!4.61e-09!15;UBERON:0000463!4.61e-09!15;UBERON:0003075!7.81e-08!86;UBERON:0007284!7.81e-08!86;UBERON:0003056!2.31e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.50e-12;32!UBERON:0002619;4.86e-12;22!UBERON:0001893;7.63e-12;34!UBERON:0002791;1.19e-11;32!UBERON:0001950;1.60e-11;20!UBERON:0003528;2.04e-11;34!UBERON:0002020;2.04e-11;34!UBERON:0002780;1.74e-10;41!UBERON:0001890;1.74e-10;41!UBERON:0000178;1.38e-09;15!UBERON:0000179;1.38e-09;15!UBERON:0000463;1.38e-09;15!UBERON:0000956;1.75e-09;25!UBERON:0000203;1.75e-09;25!UBERON:0007023;1.00e-08;114!UBERON:0000073;3.76e-08;53!UBERON:0002616;3.76e-08;53 | |||
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| ||
|short_description=p1@PRKCB | |||
}} | }} |
Latest revision as of 06:41, 25 September 2015
Short description: | p1@PRKCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRKCB_5end |
Coexpression cluster: | C2366_Neutrophils_Eosinophils_leukemia_CD19_caudate_granulocyte_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000321728, NM_002738, NM_212535, uc002dmd.2, uc002dme.2_5end |
EntrezGene: | PRKCB |
HGNC: | 9395 |
UniProt: | P05771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.53e-11 | 31 |
hematologic cancer | 2.53e-11 | 51 |
immune system cancer | 2.53e-11 | 51 |
leukemia | 1.04e-10 | 39 |