FFCP PHASE1:Hg19::chr6:151004802..151004822,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57480 | |EntrezGene=57480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20884 | |HGNC=20884 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011eem.1_5end | |association_with_transcript=0bp_to_uc011eem.1_5end | ||
|cluster_id=chr6:151004802..151004822,+ | |||
|coexpression_cluster_id=C1971 | |||
|description=CAGE_peak_3_at_PLEKHG1_5end | |description=CAGE_peak_3_at_PLEKHG1_5end | ||
|id=chr6:151004802..151004822,+ | |id=chr6:151004802..151004822,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.22e-28!24;CL:0000071!5.51e-21!18;CL:0002546!5.51e-21!18;CL:0000115!1.64e-19!35;CL:0002078!9.60e-14!44;CL:1000413!2.09e-11!9;CL:0000213!8.30e-09!57;CL:0000215!8.30e-09!57;CL:0005020!1.42e-08!6;CL:0002138!1.42e-08!6;CL:0005022!1.42e-08!6;CL:0002544!3.11e-08!6;CL:0002543!6.44e-08!6 | |ontology_enrichment_celltype=CL:0002139!5.22e-28!24;CL:0000071!5.51e-21!18;CL:0002546!5.51e-21!18;CL:0000115!1.64e-19!35;CL:0002078!9.60e-14!44;CL:1000413!2.09e-11!9;CL:0000213!8.30e-09!57;CL:0000215!8.30e-09!57;CL:0005020!1.42e-08!6;CL:0002138!1.42e-08!6;CL:0005022!1.42e-08!6;CL:0002544!3.11e-08!6;CL:0002543!6.44e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.15e-34;24!CL:0000071;2.77e-26;18!CL:0000115;6.91e-22;36!CL:1000413;2.48e-17;9!CL:0002078;3.46e-14;45!CL:0002544;4.41e-12;6!CL:0002138;1.82e-09;6!CL:0000213;8.45e-09;58!CL:0000215;8.45e-09;58!CL:0002144;6.45e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.23e-34,24;CL:0000071,2.52e-26,18;CL:0002546,2.52e-26,18;CL:0000115,2.65e-25,36;CL:0002078,6.67e-19,45;CL:1000413,2.51e-17,9;CL:0000213,3.13e-13,58;CL:0000215,3.13e-13,58;CL:0002544,3.01e-12,6;CL:0005020,1.42e-09,6;CL:0002138,1.42e-09,6;CL:0005022,1.42e-09,6;CL:0002144,6.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.77e-26;18!UBERON:0004872;4.52e-11;7!CL:0005022;1.82e-09;6!UBERON:0006601;2.12e-07;82!UBERON:0006241;2.33e-07;3!UBERON:0003057;2.33e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.28e-67!115;UBERON:0001049!1.68e-40!57;UBERON:0005068!1.68e-40!57;UBERON:0006241!1.68e-40!57;UBERON:0007135!1.68e-40!57;UBERON:0002616!1.69e-32!59;UBERON:0003080!1.90e-30!42;UBERON:0002780!1.24e-29!41;UBERON:0001890!1.24e-29!41;UBERON:0006240!1.24e-29!41;UBERON:0003075!2.69e-29!86;UBERON:0007284!2.69e-29!86;UBERON:0004111!2.84e-28!241;UBERON:0002020!3.79e-28!34;UBERON:0003528!3.79e-28!34;UBERON:0001893!2.17e-27!34;UBERON:0002346!3.35e-27!90;UBERON:0002791!1.48e-26!33;UBERON:0001017!2.13e-26!82;UBERON:0000955!2.22e-26!69;UBERON:0006238!2.22e-26!69;UBERON:0000025!5.99e-26!194;UBERON:0005743!1.42e-25!86;UBERON:0001869!2.16e-25!32;UBERON:0000477!4.35e-23!286;UBERON:0000073!6.53e-23!94;UBERON:0001016!6.53e-23!94;UBERON:0002619!1.57e-21!22;UBERON:0001986!5.51e-21!18;UBERON:0004638!5.51e-21!18;UBERON:0004852!5.51e-21!18;UBERON:0001950!2.02e-19!20;UBERON:0003056!1.80e-18!61;UBERON:0000956!3.35e-18!25;UBERON:0000203!3.35e-18!25;UBERON:0000487!4.72e-16!22;UBERON:0000483!6.83e-14!309;UBERON:0000153!1.43e-13!129;UBERON:0007811!1.43e-13!129;UBERON:0000119!1.66e-13!312;UBERON:0006914!2.04e-13!25;UBERON:0000033!1.05e-12!123;UBERON:0002308!7.95e-12!9;UBERON:0000125!7.95e-12!9;UBERON:0004121!1.09e-11!169;UBERON:0000468!1.31e-11!659;UBERON:0000467!1.63e-11!625;UBERON:0000480!1.97e-11!626;UBERON:0003915!2.09e-11!9;UBERON:0004700!2.09e-11!9;UBERON:0001917!2.09e-11!9;UBERON:0002420!2.69e-11!9;UBERON:0007245!2.69e-11!9;UBERON:0010009!2.69e-11!9;UBERON:0010011!2.69e-11!9;UBERON:0000454!2.69e-11!9;UBERON:0000924!4.87e-11!173;UBERON:0006601!4.87e-11!173;UBERON:0003076!5.83e-11!15;UBERON:0003057!5.83e-11!15;UBERON:0002298!2.80e-10!8;UBERON:0001871!1.02e-09!7;UBERON:0000055!2.83e-09!69;UBERON:0009663!3.10e-09!7;UBERON:0004732!8.50e-09!13;UBERON:0000922!2.40e-08!612;UBERON:0001638!3.94e-08!9;UBERON:0003920!3.94e-08!9;UBERON:0004582!3.94e-08!9;UBERON:0000064!4.18e-08!219;UBERON:0002050!5.10e-08!605;UBERON:0005423!5.10e-08!605;UBERON:0000200!5.60e-08!6;UBERON:0000923!1.10e-07!604;UBERON:0005291!1.10e-07!604;UBERON:0006598!1.10e-07!604;UBERON:0002532!1.10e-07!604;UBERON:0004733!1.12e-07!12;UBERON:0002028!1.12e-07!12;UBERON:0007277!1.12e-07!12;UBERON:0002049!4.69e-07!79;UBERON:0007798!4.69e-07!79;UBERON:0000062!8.71e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!2.28e-67!115;UBERON:0001049!1.68e-40!57;UBERON:0005068!1.68e-40!57;UBERON:0006241!1.68e-40!57;UBERON:0007135!1.68e-40!57;UBERON:0002616!1.69e-32!59;UBERON:0003080!1.90e-30!42;UBERON:0002780!1.24e-29!41;UBERON:0001890!1.24e-29!41;UBERON:0006240!1.24e-29!41;UBERON:0003075!2.69e-29!86;UBERON:0007284!2.69e-29!86;UBERON:0004111!2.84e-28!241;UBERON:0002020!3.79e-28!34;UBERON:0003528!3.79e-28!34;UBERON:0001893!2.17e-27!34;UBERON:0002346!3.35e-27!90;UBERON:0002791!1.48e-26!33;UBERON:0001017!2.13e-26!82;UBERON:0000955!2.22e-26!69;UBERON:0006238!2.22e-26!69;UBERON:0000025!5.99e-26!194;UBERON:0005743!1.42e-25!86;UBERON:0001869!2.16e-25!32;UBERON:0000477!4.35e-23!286;UBERON:0000073!6.53e-23!94;UBERON:0001016!6.53e-23!94;UBERON:0002619!1.57e-21!22;UBERON:0001986!5.51e-21!18;UBERON:0004638!5.51e-21!18;UBERON:0004852!5.51e-21!18;UBERON:0001950!2.02e-19!20;UBERON:0003056!1.80e-18!61;UBERON:0000956!3.35e-18!25;UBERON:0000203!3.35e-18!25;UBERON:0000487!4.72e-16!22;UBERON:0000483!6.83e-14!309;UBERON:0000153!1.43e-13!129;UBERON:0007811!1.43e-13!129;UBERON:0000119!1.66e-13!312;UBERON:0006914!2.04e-13!25;UBERON:0000033!1.05e-12!123;UBERON:0002308!7.95e-12!9;UBERON:0000125!7.95e-12!9;UBERON:0004121!1.09e-11!169;UBERON:0000468!1.31e-11!659;UBERON:0000467!1.63e-11!625;UBERON:0000480!1.97e-11!626;UBERON:0003915!2.09e-11!9;UBERON:0004700!2.09e-11!9;UBERON:0001917!2.09e-11!9;UBERON:0002420!2.69e-11!9;UBERON:0007245!2.69e-11!9;UBERON:0010009!2.69e-11!9;UBERON:0010011!2.69e-11!9;UBERON:0000454!2.69e-11!9;UBERON:0000924!4.87e-11!173;UBERON:0006601!4.87e-11!173;UBERON:0003076!5.83e-11!15;UBERON:0003057!5.83e-11!15;UBERON:0002298!2.80e-10!8;UBERON:0001871!1.02e-09!7;UBERON:0000055!2.83e-09!69;UBERON:0009663!3.10e-09!7;UBERON:0004732!8.50e-09!13;UBERON:0000922!2.40e-08!612;UBERON:0001638!3.94e-08!9;UBERON:0003920!3.94e-08!9;UBERON:0004582!3.94e-08!9;UBERON:0000064!4.18e-08!219;UBERON:0002050!5.10e-08!605;UBERON:0005423!5.10e-08!605;UBERON:0000200!5.60e-08!6;UBERON:0000923!1.10e-07!604;UBERON:0005291!1.10e-07!604;UBERON:0006598!1.10e-07!604;UBERON:0002532!1.10e-07!604;UBERON:0004733!1.12e-07!12;UBERON:0002028!1.12e-07!12;UBERON:0007277!1.12e-07!12;UBERON:0002049!4.69e-07!79;UBERON:0007798!4.69e-07!79;UBERON:0000062!8.71e-07!511 | ||
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| ||
|short_description=p3@PLEKHG1 | |short_description=p3@PLEKHG1 | ||
}} | }} |
Latest revision as of 04:03, 16 September 2015
Short description: | p3@PLEKHG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLEKHG1_5end |
Coexpression cluster: | C1971_spleen_Endothelial_heart_lung_adipose_mature_locus |
Association with transcript: | 0bp_to_uc011eem.1_5end |
EntrezGene: | PLEKHG1 |
HGNC: | 20884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.23e-34 | 24 |
blood vessel endothelial cell | 2.52e-26 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.52e-26 | 18 |
endothelial cell | 2.65e-25 | 36 |
meso-epithelial cell | 6.67e-19 | 45 |
endothelial cell of artery | 2.51e-17 | 9 |
lining cell | 3.13e-13 | 58 |
barrier cell | 3.13e-13 | 58 |
aortic endothelial cell | 3.01e-12 | 6 |
lymphangioblast | 1.42e-09 | 6 |
endothelial cell of lymphatic vessel | 1.42e-09 | 6 |
vascular lymphangioblast | 1.42e-09 | 6 |
capillary endothelial cell | 6.75e-07 | 3 |