FFCP PHASE1:Hg19::chr16:19800150..19800179,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:19800150..19800179,+ | |||
|coexpression_cluster_id=C162 | |coexpression_cluster_id=C162 | ||
|description=CAGE_peak_at_chr16:19800150..19800179,+ | |description=CAGE_peak_at_chr16:19800150..19800179,+ | ||
|id=chr16:19800150..19800179,+ | |id=chr16:19800150..19800179,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.80e-67;3!UBERON:0003057;9.80e-67;3!UBERON:0006222;3.28e-23;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-22!57;UBERON:0005068!1.02e-22!57;UBERON:0006241!1.02e-22!57;UBERON:0007135!1.02e-22!57;UBERON:0003075!1.24e-17!86;UBERON:0007284!1.24e-17!86;UBERON:0002346!1.61e-17!90;UBERON:0001893!1.91e-17!34;UBERON:0002020!2.02e-17!34;UBERON:0003528!2.02e-17!34;UBERON:0002780!4.76e-17!41;UBERON:0001890!4.76e-17!41;UBERON:0006240!4.76e-17!41;UBERON:0002616!1.64e-16!59;UBERON:0003080!1.72e-16!42;UBERON:0002791!2.18e-16!33;UBERON:0001017!3.63e-16!82;UBERON:0005743!3.74e-16!86;UBERON:0001869!8.61e-15!32;UBERON:0007023!3.83e-14!115;UBERON:0003056!6.56e-14!61;UBERON:0000955!1.00e-13!69;UBERON:0006238!1.00e-13!69;UBERON:0000073!1.05e-13!94;UBERON:0001016!1.05e-13!94;UBERON:0000033!4.53e-11!123;UBERON:0000477!2.32e-10!286;UBERON:0000956!3.52e-10!25;UBERON:0000203!3.52e-10!25;UBERON:0000153!4.30e-10!129;UBERON:0007811!4.30e-10!129;UBERON:0004111!1.09e-09!241;UBERON:0002308!1.24e-09!9;UBERON:0000125!1.24e-09!9;UBERON:0000924!3.37e-09!173;UBERON:0006601!3.37e-09!173;UBERON:0004121!4.64e-09!169;UBERON:0002298!1.58e-08!8;UBERON:0002619!2.13e-08!22;UBERON:0000025!5.68e-08!194;UBERON:0001950!1.14e-07!20;UBERON:0003076!1.81e-07!15;UBERON:0003057!1.81e-07!15;UBERON:0000200!2.23e-07!6;UBERON:0002240!2.50e-07!3;UBERON:0002420!2.57e-07!9;UBERON:0007245!2.57e-07!9;UBERON:0010009!2.57e-07!9;UBERON:0010011!2.57e-07!9;UBERON:0000454!2.57e-07!9;UBERON:0009663!7.33e-07!7;UBERON:0006947!8.76e-07!3;UBERON:0004054!8.76e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.02e-22!57;UBERON:0005068!1.02e-22!57;UBERON:0006241!1.02e-22!57;UBERON:0007135!1.02e-22!57;UBERON:0003075!1.24e-17!86;UBERON:0007284!1.24e-17!86;UBERON:0002346!1.61e-17!90;UBERON:0001893!1.91e-17!34;UBERON:0002020!2.02e-17!34;UBERON:0003528!2.02e-17!34;UBERON:0002780!4.76e-17!41;UBERON:0001890!4.76e-17!41;UBERON:0006240!4.76e-17!41;UBERON:0002616!1.64e-16!59;UBERON:0003080!1.72e-16!42;UBERON:0002791!2.18e-16!33;UBERON:0001017!3.63e-16!82;UBERON:0005743!3.74e-16!86;UBERON:0001869!8.61e-15!32;UBERON:0007023!3.83e-14!115;UBERON:0003056!6.56e-14!61;UBERON:0000955!1.00e-13!69;UBERON:0006238!1.00e-13!69;UBERON:0000073!1.05e-13!94;UBERON:0001016!1.05e-13!94;UBERON:0000033!4.53e-11!123;UBERON:0000477!2.32e-10!286;UBERON:0000956!3.52e-10!25;UBERON:0000203!3.52e-10!25;UBERON:0000153!4.30e-10!129;UBERON:0007811!4.30e-10!129;UBERON:0004111!1.09e-09!241;UBERON:0002308!1.24e-09!9;UBERON:0000125!1.24e-09!9;UBERON:0000924!3.37e-09!173;UBERON:0006601!3.37e-09!173;UBERON:0004121!4.64e-09!169;UBERON:0002298!1.58e-08!8;UBERON:0002619!2.13e-08!22;UBERON:0000025!5.68e-08!194;UBERON:0001950!1.14e-07!20;UBERON:0003076!1.81e-07!15;UBERON:0003057!1.81e-07!15;UBERON:0000200!2.23e-07!6;UBERON:0002240!2.50e-07!3;UBERON:0002420!2.57e-07!9;UBERON:0007245!2.57e-07!9;UBERON:0010009!2.57e-07!9;UBERON:0010011!2.57e-07!9;UBERON:0000454!2.57e-07!9;UBERON:0009663!7.33e-07!7;UBERON:0006947!8.76e-07!3;UBERON:0004054!8.76e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;9.80e-67;3!UBERON:0005174;9.80e-67;3!UBERON:0001137;9.80e-67;3!UBERON:0001896;4.17e-30;3!UBERON:0005290;4.17e-30;3!UBERON:0002298;1.31e-15;6!UBERON:0001894;1.58e-13;7!UBERON:0000073;6.17e-13;53!UBERON:0002616;6.17e-13;53!UBERON:0001897;2.59e-12;2!UBERON:0001954;2.59e-12;2!UBERON:0003022;2.59e-12;2!UBERON:0002421;2.59e-12;2!UBERON:0010225;2.59e-12;2!UBERON:0002600;2.59e-12;2!UBERON:0001017;1.28e-08;75!UBERON:0004733;2.75e-08;12!UBERON:0002028;2.75e-08;12!UBERON:0002780;7.23e-08;41!UBERON:0001890;7.23e-08;41!UBERON:0004732;1.02e-07;13!UBERON:0001016;1.05e-07;83!UBERON:0000489;1.49e-07;29!UBERON:0002784;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,9.82e-67,3;UBERON:0005174,9.82e-67,3;UBERON:0001137,9.82e-67,3;UBERON:0003076,7.17e-37,15;UBERON:0003057,7.17e-37,15;UBERON:0001049,5.75e-31,56;UBERON:0005068,5.75e-31,56;UBERON:0006241,5.75e-31,56;UBERON:0007135,5.75e-31,56;UBERON:0001896,3.59e-30,3;UBERON:0005290,3.59e-30,3;UBERON:0010096,3.59e-30,3;UBERON:0001017,3.01e-21,81;UBERON:0003075,3.01e-21,82;UBERON:0007284,3.01e-21,82;UBERON:0002346,2.89e-20,86;UBERON:0001016,3.70e-19,89;UBERON:0010371,9.10e-17,104;UBERON:0002298,1.22e-15,6;UBERON:0000073,1.23e-14,53;UBERON:0002616,1.23e-14,53;UBERON:0001894,2.17e-13,7;UBERON:0006222,2.17e-13,7;UBERON:0010314,3.39e-13,132;UBERON:0001954,1.85e-12,2;UBERON:0003022,1.85e-12,2;UBERON:0002421,1.85e-12,2;UBERON:0002600,1.85e-12,2;UBERON:0001897,3.62e-12,2;UBERON:0010225,3.62e-12,2;UBERON:0000955,2.69e-11,68;UBERON:0006238,2.69e-11,68;UBERON:0004121,5.05e-10,171;UBERON:0000924,5.05e-10,171;UBERON:0006601,5.05e-10,171;UBERON:0007023,2.38e-09,114;UBERON:0000025,5.27e-09,192;UBERON:0002780,9.42e-09,41;UBERON:0001890,9.42e-09,41;UBERON:0003080,9.42e-09,41;UBERON:0006240,9.42e-09,41;UBERON:0004733,2.65e-08,12;UBERON:0002028,2.65e-08,12;UBERON:0007277,2.65e-08,12;UBERON:0004732,9.84e-08,13;UBERON:0011216,1.33e-07,223;UBERON:0004111,3.89e-07,240;UBERON:0000489,4.21e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,1.43117993565528,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.723578631752448,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.741412462787447,0,1.1713222286267,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.52418000472609,0,0.0967563312890851,0,0.328461828212837,0.0969890164884194,0.0882561266915003,0,0,0,0.253243183823515,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,1.90684768556206,0.321506296930038,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.3755727921195,0,1.22021956690538,1.67660287941735,0,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.607719912354764,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0.6124909547064,0.449604575675217,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.475788130837822,0.131545547125698,0,0.111231401892069,0,0.942693539496011,0,0.913158720509496,0,0.47775168788705,0,0,0.116241425368125,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.846774100381858,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0,0,0,0.235676547101626,5.69294554633341,4.75274240523338,1.2679671827502,0,0,0,0,0,0,0,0,0.458729283404541,0.573358332605805,0.157771562193185,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,1.03432995861895,0,0,0,0,0.224263725161227,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,1.43117993565528,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.723578631752448,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.741412462787447,0,1.1713222286267,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.52418000472609,0,0.0967563312890851,0,0.328461828212837,0.0969890164884194,0.0882561266915003,0,0,0,0.253243183823515,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,1.90684768556206,0.321506296930038,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.3755727921195,0,1.22021956690538,1.67660287941735,0,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.607719912354764,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0.6124909547064,0.449604575675217,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.475788130837822,0.131545547125698,0,0.111231401892069,0,0.942693539496011,0,0.913158720509496,0,0.47775168788705,0,0,0.116241425368125,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.846774100381858,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0,0,0,0.235676547101626,5.69294554633341,4.75274240523338,1.2679671827502,0,0,0,0,0,0,0,0,0.458729283404541,0.573358332605805,0.157771562193185,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,1.03432995861895,0,0,0,0,0.224263725161227,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:19800150..19800179,+ | |short_description=p@chr16:19800150..19800179,+ | ||
}} | }} |
Latest revision as of 06:51, 25 July 2015
Short description: | p@chr16:19800150..19800179, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:19800150..19800179, + |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.12e-08 | 3 |