FFCP PHASE1:Hg19::chr2:45169684..45169715,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6496 | |EntrezGene=6496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10889 | |HGNC=10889 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=442bp_to_AB464210,BC153026_5end | |association_with_transcript=442bp_to_AB464210,BC153026_5end | ||
|cluster_id=chr2:45169684..45169715,+ | |||
|coexpression_cluster_id=C1905 | |coexpression_cluster_id=C1905 | ||
|description=CAGE_peak_9_at_SIX3_5end | |description=CAGE_peak_9_at_SIX3_5end | ||
|id=chr2:45169684..45169715,+ | |id=chr2:45169684..45169715,+ | ||
|ontology_enrichment_celltype=CL:0002586!8.63e-07!3;CL:0000064!9.52e-07!3;CL:0005012!9.52e-07!3;CL:0000067!9.52e-07!3;CL:0002304!9.52e-07!3 | |ontology_enrichment_celltype=CL:0002586!8.63e-07!3;CL:0000064!9.52e-07!3;CL:0005012!9.52e-07!3;CL:0000067!9.52e-07!3;CL:0002304!9.52e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000306;9.38e-13;4!CL:0002222;9.38e-13;4!CL:0002224;9.38e-13;4!CL:0002586;3.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,9.78e-13,4;CL:0002222,9.78e-13,4;CL:0002224,9.78e-13,4;CL:0002586,2.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.39e-13;2!UBERON:0006222;4.92e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;3.46e-07;1!DOID:0060061;3.46e-07;1!DOID:8691;3.46e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.78e-07,1;DOID:0060061,3.78e-07,1;DOID:8691,3.78e-07,1;DOID:630,7.15e-07,1;DOID:0050177,7.15e-07,1;DOID:0050427,7.15e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0009663;4.07e-29;7!UBERON:0000369;4.75e-24;4!UBERON:0002435;4.75e-24;4!UBERON:0000204;4.75e-24;4!UBERON:0007625;3.48e-23;11!UBERON:0002420;1.55e-22;9!UBERON:0000125;1.55e-22;9!UBERON:0007245;1.55e-22;9!UBERON:0002308;1.55e-22;9!UBERON:0010009;1.55e-22;9!UBERON:0010011;1.55e-22;9!UBERON:0000454;1.55e-22;9!UBERON:0000970;1.55e-20;20!UBERON:0001894;2.42e-20;7!UBERON:0002104;1.73e-19;21!UBERON:0005383;9.62e-19;3!UBERON:0005382;9.62e-19;3!UBERON:0000020;1.14e-17;23!UBERON:0000019;3.52e-17;19!UBERON:0000047;3.52e-17;19!UBERON:0004088;3.52e-17;19!UBERON:0010230;3.52e-17;19!UBERON:0001032;7.17e-17;24!UBERON:0004456;7.17e-17;24!UBERON:0001456;1.96e-15;21!UBERON:0001873;4.39e-13;2!UBERON:0000007;6.61e-13;2!UBERON:0010077;9.38e-13;4!UBERON:0005389;9.38e-13;4!UBERON:0000484;9.38e-13;4!UBERON:0000965;9.38e-13;4!UBERON:0001803;9.38e-13;4!UBERON:0001897;4.26e-12;2!UBERON:0010225;4.26e-12;2!UBERON:0001875;8.56e-12;2!UBERON:0006514;8.56e-12;2!UBERON:0002780;3.53e-11;41!UBERON:0001890;3.53e-11;41!UBERON:0000966;1.43e-10;5!UBERON:0005388;1.43e-10;5!UBERON:0001802;1.43e-10;5!UBERON:0001801;1.75e-09;14!UBERON:0001781;3.76e-08;3!UBERON:0001782;3.76e-08;3!UBERON:0010371;5.64e-08;31!UBERON:0000073;1.92e-07;53!UBERON:0002616;1.92e-07;53!UBERON:0001874;2.22e-07;1!UBERON:0001882;4.92e-07;1!UBERON:0005403;4.92e-07;1!UBERON:0003296;7.37e-07;4!UBERON:0010133;7.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,3.80e-29,7;UBERON:0003056,1.65e-28,61;UBERON:0000369,4.13e-24,4;UBERON:0002435,4.13e-24,4;UBERON:0000204,4.13e-24,4;UBERON:0010082,4.13e-24,4;UBERON:0007625,3.26e-23,11;UBERON:0002420,1.47e-22,9;UBERON:0000125,1.47e-22,9;UBERON:0007245,1.47e-22,9;UBERON:0002308,1.47e-22,9;UBERON:0010009,1.47e-22,9;UBERON:0010011,1.47e-22,9;UBERON:0000454,1.47e-22,9;UBERON:0002346,2.45e-21,86;UBERON:0001894,2.15e-20,7;UBERON:0006222,2.15e-20,7;UBERON:0003075,2.99e-20,82;UBERON:0007284,2.99e-20,82;UBERON:0000970,1.64e-19,21;UBERON:0002104,1.64e-19,21;UBERON:0005383,9.65e-19,3;UBERON:0005382,9.65e-19,3;UBERON:0000020,6.84e-17,24;UBERON:0001032,6.84e-17,24;UBERON:0004456,6.84e-17,24;UBERON:0000019,2.76e-16,20;UBERON:0000047,2.76e-16,20;UBERON:0010312,2.76e-16,20;UBERON:0004088,2.76e-16,20;UBERON:0010230,2.76e-16,20;UBERON:0003072,2.76e-16,20;UBERON:0004128,2.76e-16,20;UBERON:0003071,2.76e-16,20;UBERON:0010371,3.79e-15,104;UBERON:0001456,1.06e-14,22;UBERON:0002780,2.02e-14,41;UBERON:0001890,2.02e-14,41;UBERON:0003080,2.02e-14,41;UBERON:0006240,2.02e-14,41;UBERON:0001873,4.39e-13,2;UBERON:0010122,4.39e-13,2;UBERON:0000007,6.62e-13,2;UBERON:0010077,9.78e-13,4;UBERON:0005389,9.78e-13,4;UBERON:0000484,9.78e-13,4;UBERON:0002546,9.78e-13,4;UBERON:0000965,9.78e-13,4;UBERON:0001803,9.78e-13,4;UBERON:0003073,9.78e-13,4;UBERON:0005426,9.78e-13,4;UBERON:0001897,3.70e-12,2;UBERON:0010225,3.70e-12,2;UBERON:0001875,9.06e-12,2;UBERON:0006514,9.06e-12,2;UBERON:0010314,4.18e-11,132;UBERON:0004121,9.14e-11,171;UBERON:0000924,9.14e-11,171;UBERON:0006601,9.14e-11,171;UBERON:0000073,9.53e-11,53;UBERON:0002616,9.53e-11,53;UBERON:0005085,4.27e-10,31;UBERON:0001049,4.51e-10,56;UBERON:0005068,4.51e-10,56;UBERON:0006241,4.51e-10,56;UBERON:0007135,4.51e-10,56;UBERON:0001801,2.07e-09,14;UBERON:0000966,5.04e-09,6;UBERON:0005388,5.04e-09,6;UBERON:0001802,5.04e-09,6;UBERON:0001782,2.51e-08,3;UBERON:0005424,2.51e-08,3;UBERON:0000955,8.06e-08,68;UBERON:0006238,8.06e-08,68;UBERON:0001016,8.69e-08,89;UBERON:0001874,2.22e-07,1;UBERON:0001882,4.25e-07,1;UBERON:0005403,4.25e-07,1;UBERON:0003296,7.38e-07,4;UBERON:0010133,7.38e-07,4 | |||
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|short_description=p9@SIX3 | |short_description=p9@SIX3 | ||
}} | }} |
Latest revision as of 09:43, 17 September 2015
Short description: | p9@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SIX3_5end |
Coexpression cluster: | C1905_caudate_putamen_embryonic_pituitary_globus_cord_rhabdomyosarcoma |
Association with transcript: | 442bp_to_AB464210, BC153026_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 9.78e-13 | 4 |
vertebrate lens cell | 9.78e-13 | 4 |
lens epithelial cell | 9.78e-13 | 4 |
retinal pigment epithelial cell | 2.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.78e-07 | 1 |
cutaneous T cell lymphoma | 3.78e-07 | 1 |
mycosis fungoides | 3.78e-07 | 1 |
genetic disease | 7.15e-07 | 1 |
monogenic disease | 7.15e-07 | 1 |
xeroderma pigmentosum | 7.15e-07 | 1 |