FFCP PHASE1:Hg19::chr2:73298831..73298870,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94097 | |EntrezGene=94097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16073 | |HGNC=16073 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZJ6,C9JIV5,F8WBH6 | |UniProt=B8ZZJ6,C9JIV5,F8WBH6 | ||
|association_with_transcript=0bp_to_ENST00000410065,ENST00000416579,ENST00000442582,ENST00000450185_5end | |association_with_transcript=0bp_to_ENST00000410065,ENST00000416579,ENST00000442582,ENST00000450185_5end | ||
|cluster_id=chr2:73298831..73298870,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_SFXN5_5end | |description=CAGE_peak_1_at_SFXN5_5end | ||
|id=chr2:73298831..73298870,- | |id=chr2:73298831..73298870,- | ||
|ontology_enrichment_celltype=CL:0000860!5.27e-13!45;CL:0002194!1.77e-12!63;CL:0000576!1.77e-12!63;CL:0000040!1.77e-12!63;CL:0000559!1.77e-12!63;CL:0002057!2.75e-12!42;CL:0002009!8.21e-12!65;CL:0000766!3.80e-10!76;CL:0000839!6.52e-10!70;CL:0000557!6.05e-09!71 | |ontology_enrichment_celltype=CL:0000860!5.27e-13!45;CL:0002194!1.77e-12!63;CL:0000576!1.77e-12!63;CL:0000040!1.77e-12!63;CL:0000559!1.77e-12!63;CL:0002057!2.75e-12!42;CL:0002009!8.21e-12!65;CL:0000766!3.80e-10!76;CL:0000839!6.52e-10!70;CL:0000557!6.05e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.47e-08;33!CL:0002057;1.47e-08;33!CL:0000473;3.39e-08;39!CL:0000234;3.39e-08;39!CL:0000576;1.17e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.02e-13,48;CL:0000234,3.02e-13,48;CL:0000860,2.75e-12,42;CL:0002057,2.75e-12,42;CL:0002194,3.20e-12,59;CL:0000576,3.20e-12,59;CL:0000040,3.20e-12,59;CL:0000559,3.20e-12,59;CL:0002009,1.55e-11,61;CL:0000766,7.95e-10,72;CL:0000839,1.34e-09,66;CL:0000557,1.26e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;4.00e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.49e-34!82;UBERON:0005743!1.83e-32!86;UBERON:0001049!3.46e-30!57;UBERON:0005068!3.46e-30!57;UBERON:0006241!3.46e-30!57;UBERON:0007135!3.46e-30!57;UBERON:0000955!5.55e-27!69;UBERON:0006238!5.55e-27!69;UBERON:0000073!5.61e-27!94;UBERON:0001016!5.61e-27!94;UBERON:0002616!2.12e-25!59;UBERON:0003075!3.35e-23!86;UBERON:0007284!3.35e-23!86;UBERON:0002780!2.76e-22!41;UBERON:0001890!2.76e-22!41;UBERON:0006240!2.76e-22!41;UBERON:0003080!9.33e-22!42;UBERON:0001893!2.28e-21!34;UBERON:0002020!2.40e-21!34;UBERON:0003528!2.40e-21!34;UBERON:0002791!9.86e-21!33;UBERON:0002346!1.36e-20!90;UBERON:0001869!2.95e-20!32;UBERON:0003056!1.84e-16!61;UBERON:0000956!8.03e-16!25;UBERON:0000203!8.03e-16!25;UBERON:0000025!2.23e-14!194;UBERON:0002619!3.42e-14!22;UBERON:0001950!7.55e-13!20;UBERON:0007023!4.61e-12!115;UBERON:0000922!5.11e-11!612;UBERON:0000468!3.32e-10!659;UBERON:0000062!3.78e-10!511;UBERON:0000923!6.47e-10!604;UBERON:0005291!6.47e-10!604;UBERON:0006598!6.47e-10!604;UBERON:0002532!6.47e-10!604;UBERON:0002050!8.04e-10!605;UBERON:0005423!8.04e-10!605;UBERON:0000467!8.26e-10!625;UBERON:0003076!1.53e-09!15;UBERON:0003057!1.53e-09!15;UBERON:0000480!1.60e-09!626;UBERON:0002405!3.16e-09!115;UBERON:0000033!6.86e-09!123;UBERON:0002390!2.29e-08!102;UBERON:0003061!2.29e-08!102;UBERON:0000153!2.81e-08!129;UBERON:0007811!2.81e-08!129;UBERON:0004111!3.93e-08!241;UBERON:0002193!6.24e-08!112;UBERON:0004733!7.27e-08!12;UBERON:0002028!7.27e-08!12;UBERON:0007277!7.27e-08!12;UBERON:0002371!1.39e-07!80;UBERON:0004732!1.60e-07!13;UBERON:0002420!3.38e-07!9;UBERON:0007245!3.38e-07!9;UBERON:0010009!3.38e-07!9;UBERON:0010011!3.38e-07!9;UBERON:0000454!3.38e-07!9;UBERON:0000119!4.04e-07!312;UBERON:0002308!5.47e-07!9;UBERON:0000125!5.47e-07!9;UBERON:0001474!5.76e-07!86;UBERON:0000483!6.31e-07!309;UBERON:0005172!6.33e-07!55;UBERON:0005173!6.33e-07!55;UBERON:0004121!8.00e-07!169 | |ontology_enrichment_uberon=UBERON:0001017!6.49e-34!82;UBERON:0005743!1.83e-32!86;UBERON:0001049!3.46e-30!57;UBERON:0005068!3.46e-30!57;UBERON:0006241!3.46e-30!57;UBERON:0007135!3.46e-30!57;UBERON:0000955!5.55e-27!69;UBERON:0006238!5.55e-27!69;UBERON:0000073!5.61e-27!94;UBERON:0001016!5.61e-27!94;UBERON:0002616!2.12e-25!59;UBERON:0003075!3.35e-23!86;UBERON:0007284!3.35e-23!86;UBERON:0002780!2.76e-22!41;UBERON:0001890!2.76e-22!41;UBERON:0006240!2.76e-22!41;UBERON:0003080!9.33e-22!42;UBERON:0001893!2.28e-21!34;UBERON:0002020!2.40e-21!34;UBERON:0003528!2.40e-21!34;UBERON:0002791!9.86e-21!33;UBERON:0002346!1.36e-20!90;UBERON:0001869!2.95e-20!32;UBERON:0003056!1.84e-16!61;UBERON:0000956!8.03e-16!25;UBERON:0000203!8.03e-16!25;UBERON:0000025!2.23e-14!194;UBERON:0002619!3.42e-14!22;UBERON:0001950!7.55e-13!20;UBERON:0007023!4.61e-12!115;UBERON:0000922!5.11e-11!612;UBERON:0000468!3.32e-10!659;UBERON:0000062!3.78e-10!511;UBERON:0000923!6.47e-10!604;UBERON:0005291!6.47e-10!604;UBERON:0006598!6.47e-10!604;UBERON:0002532!6.47e-10!604;UBERON:0002050!8.04e-10!605;UBERON:0005423!8.04e-10!605;UBERON:0000467!8.26e-10!625;UBERON:0003076!1.53e-09!15;UBERON:0003057!1.53e-09!15;UBERON:0000480!1.60e-09!626;UBERON:0002405!3.16e-09!115;UBERON:0000033!6.86e-09!123;UBERON:0002390!2.29e-08!102;UBERON:0003061!2.29e-08!102;UBERON:0000153!2.81e-08!129;UBERON:0007811!2.81e-08!129;UBERON:0004111!3.93e-08!241;UBERON:0002193!6.24e-08!112;UBERON:0004733!7.27e-08!12;UBERON:0002028!7.27e-08!12;UBERON:0007277!7.27e-08!12;UBERON:0002371!1.39e-07!80;UBERON:0004732!1.60e-07!13;UBERON:0002420!3.38e-07!9;UBERON:0007245!3.38e-07!9;UBERON:0010009!3.38e-07!9;UBERON:0010011!3.38e-07!9;UBERON:0000454!3.38e-07!9;UBERON:0000119!4.04e-07!312;UBERON:0002308!5.47e-07!9;UBERON:0000125!5.47e-07!9;UBERON:0001474!5.76e-07!86;UBERON:0000483!6.31e-07!309;UBERON:0005172!6.33e-07!55;UBERON:0005173!6.33e-07!55;UBERON:0004121!8.00e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.27e-18;34!UBERON:0003528;2.04e-18;34!UBERON:0002020;2.04e-18;34!UBERON:0001869;2.15e-18;32!UBERON:0002791;2.54e-18;32!UBERON:0000073;7.60e-17;53!UBERON:0002616;7.60e-17;53!UBERON:0002780;3.71e-16;41!UBERON:0001890;3.71e-16;41!UBERON:0000956;8.26e-16;25!UBERON:0000203;8.26e-16;25!UBERON:0002619;3.62e-14;22!UBERON:0000955;5.56e-13;68!UBERON:0001950;8.13e-13;20!UBERON:0001017;2.41e-12;75!UBERON:0001016;1.97e-10;83!UBERON:0004733;6.56e-08;12!UBERON:0002028;6.56e-08;12!UBERON:0004732;1.24e-07;13!UBERON:0002420;3.15e-07;9!UBERON:0007245;3.15e-07;9!UBERON:0010009;3.15e-07;9!UBERON:0010011;3.15e-07;9!UBERON:0000454;3.15e-07;9!UBERON:0000125;5.09e-07;9!UBERON:0002308;5.09e-07;9 | |||
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| ||
|short_description=p1@SFXN5 | |short_description=p1@SFXN5 | ||
}} | }} |
Latest revision as of 09:00, 18 September 2015
Short description: | p1@SFXN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFXN5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000410065, ENST00000416579, ENST00000442582, ENST00000450185_5end |
EntrezGene: | SFXN5 |
HGNC: | 16073 |
UniProt: | B8ZZJ6C9JIV5F8WBH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.02e-13 | 48 |
phagocyte | 3.02e-13 | 48 |
classical monocyte | 2.75e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.75e-12 | 42 |
monopoietic cell | 3.20e-12 | 59 |
monocyte | 3.20e-12 | 59 |
monoblast | 3.20e-12 | 59 |
promonocyte | 3.20e-12 | 59 |
macrophage dendritic cell progenitor | 1.55e-11 | 61 |
myeloid leukocyte | 7.95e-10 | 72 |
myeloid lineage restricted progenitor cell | 1.34e-09 | 66 |
granulocyte monocyte progenitor cell | 1.26e-08 | 67 |