FFCP PHASE1:Hg19::chr14:24641209..24641246,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9985 | |EntrezGene=9985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16879 | |HGNC=16879 | ||
|TSSclassifier=strong | |||
|UniProt=O95072 | |UniProt=O95072 | ||
|association_with_transcript=0bp_to_ENST00000557806,ENST00000559919,NM_001048205,NM_005132,uc001wmr.2,uc001wms.2_5end | |association_with_transcript=0bp_to_ENST00000557806,ENST00000559919,NM_001048205,NM_005132,uc001wmr.2,uc001wms.2_5end | ||
|cluster_id=chr14:24641209..24641246,+ | |||
|coexpression_cluster_id=C3416 | |coexpression_cluster_id=C3416 | ||
|description=CAGE_peak_2_at_REC8_5end | |description=CAGE_peak_2_at_REC8_5end | ||
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|ontology_enrichment_celltype=CL:1000449!9.11e-12!16;CL:0002681!1.30e-09!13;CL:0002584!1.30e-09!13;CL:1000497!1.75e-09!18;CL:0002518!1.75e-09!18;CL:1000507!4.20e-09!12;CL:1000494!4.20e-09!12;CL:0002319!9.51e-07!25 | |ontology_enrichment_celltype=CL:1000449!9.11e-12!16;CL:0002681!1.30e-09!13;CL:0002584!1.30e-09!13;CL:1000497!1.75e-09!18;CL:0002518!1.75e-09!18;CL:1000507!4.20e-09!12;CL:1000494!4.20e-09!12;CL:0002319!9.51e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:1000449;7.57e-15;15!CL:1000497;2.67e-12;17!CL:0002518;2.67e-12;17!CL:0002681;3.89e-12;12!CL:0002584;3.89e-12;12!CL:1000507;9.59e-11;10!CL:1000494;9.59e-11;10!CL:0002319;4.31e-08;25!CL:1000746;1.21e-07;7!CL:1000612;1.21e-07;7 | |ontology_enrichment_celltype_v019=CL:1000449;7.57e-15;15!CL:1000497;2.67e-12;17!CL:0002518;2.67e-12;17!CL:0002681;3.89e-12;12!CL:0002584;3.89e-12;12!CL:1000507;9.59e-11;10!CL:1000494;9.59e-11;10!CL:0002319;4.31e-08;25!CL:1000746;1.21e-07;7!CL:1000612;1.21e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,8.48e-15,15;CL:1000497,2.94e-12,17;CL:0002518,2.94e-12,17;CL:0002681,4.23e-12,12;CL:0002584,4.23e-12,12;CL:1000507,1.03e-10,10;CL:1000494,1.03e-10,10;CL:0002319,3.85e-08,25;CL:1000746,1.26e-07,7;CL:1000612,1.26e-07,7;CL:0000047,5.13e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.68e-30!86;UBERON:0007284!2.68e-30!86;UBERON:0002346!6.01e-30!90;UBERON:0005743!6.97e-28!86;UBERON:0000073!8.58e-27!94;UBERON:0001016!8.58e-27!94;UBERON:0001017!2.36e-25!82;UBERON:0003056!2.84e-25!61;UBERON:0001049!5.02e-23!57;UBERON:0005068!5.02e-23!57;UBERON:0006241!5.02e-23!57;UBERON:0007135!5.02e-23!57;UBERON:0002616!1.14e-21!59;UBERON:0000955!1.36e-19!69;UBERON:0006238!1.36e-19!69;UBERON:0000153!2.02e-17!129;UBERON:0007811!2.02e-17!129;UBERON:0000924!3.02e-17!173;UBERON:0006601!3.02e-17!173;UBERON:0004121!4.44e-17!169;UBERON:0000033!6.61e-17!123;UBERON:0002780!4.93e-16!41;UBERON:0001890!4.93e-16!41;UBERON:0006240!4.93e-16!41;UBERON:0003080!5.30e-16!42;UBERON:0007023!6.82e-16!115;UBERON:0000064!3.49e-14!219;UBERON:0002020!1.90e-13!34;UBERON:0003528!1.90e-13!34;UBERON:0001893!1.99e-13!34;UBERON:0002791!3.78e-13!33;UBERON:0001869!7.53e-13!32;UBERON:0003887!2.86e-12!21;UBERON:0000119!3.35e-12!312;UBERON:0000080!4.22e-12!18;UBERON:0002120!4.22e-12!18;UBERON:0004875!4.22e-12!18;UBERON:0005721!4.22e-12!18;UBERON:0005754!4.22e-12!18;UBERON:0007297!4.22e-12!18;UBERON:0000483!5.82e-12!309;UBERON:0006555!7.30e-12!17;UBERON:0005103!7.30e-12!17;UBERON:0000083!7.30e-12!17;UBERON:0009201!7.30e-12!17;UBERON:0004819!7.30e-12!17;UBERON:0006553!7.30e-12!17;UBERON:0003074!7.30e-12!17;UBERON:0003060!7.30e-12!17;UBERON:0004211!9.11e-12!16;UBERON:0001285!9.11e-12!16;UBERON:0007684!9.11e-12!16;UBERON:0003220!9.11e-12!16;UBERON:0004208!9.11e-12!16;UBERON:0000025!1.81e-11!194;UBERON:0002104!3.40e-11!21;UBERON:0004876!6.60e-11!20;UBERON:0000970!8.64e-11!20;UBERON:0000019!1.70e-10!19;UBERON:0000047!1.70e-10!19;UBERON:0004088!1.70e-10!19;UBERON:0003072!1.70e-10!19;UBERON:0003071!1.70e-10!19;UBERON:0004128!1.70e-10!19;UBERON:0000956!3.49e-10!25;UBERON:0000203!3.49e-10!25;UBERON:0000481!4.55e-10!347;UBERON:0001225!1.30e-09!13;UBERON:0008987!1.30e-09!13;UBERON:0001032!3.21e-09!24;UBERON:0004456!3.21e-09!24;UBERON:0009773!4.20e-09!12;UBERON:0001231!4.20e-09!12;UBERON:0004810!4.20e-09!12;UBERON:0000020!8.10e-09!23;UBERON:0001456!1.24e-08!21;UBERON:0002619!2.04e-08!22;UBERON:0000477!2.26e-08!286;UBERON:0003076!2.47e-08!15;UBERON:0003057!2.47e-08!15;UBERON:0000353!4.08e-08!17;UBERON:0001851!4.31e-08!16;UBERON:0000058!4.55e-08!26;UBERON:0007625!5.04e-08!11;UBERON:0004111!8.67e-08!241;UBERON:0001950!9.27e-08!20;UBERON:0004732!1.47e-07!13;UBERON:0000489!2.08e-07!32;UBERON:0000475!2.66e-07!365;UBERON:0001801!2.68e-07!14;UBERON:0004733!3.72e-07!12;UBERON:0002028!3.72e-07!12;UBERON:0007277!3.72e-07!12;UBERON:0000922!4.82e-07!612;UBERON:0002113!8.01e-07!27;UBERON:0003918!8.01e-07!27;UBERON:0005095!8.01e-07!27;UBERON:0007687!8.01e-07!27;UBERON:0000063!9.22e-07!97 | |ontology_enrichment_uberon=UBERON:0003075!2.68e-30!86;UBERON:0007284!2.68e-30!86;UBERON:0002346!6.01e-30!90;UBERON:0005743!6.97e-28!86;UBERON:0000073!8.58e-27!94;UBERON:0001016!8.58e-27!94;UBERON:0001017!2.36e-25!82;UBERON:0003056!2.84e-25!61;UBERON:0001049!5.02e-23!57;UBERON:0005068!5.02e-23!57;UBERON:0006241!5.02e-23!57;UBERON:0007135!5.02e-23!57;UBERON:0002616!1.14e-21!59;UBERON:0000955!1.36e-19!69;UBERON:0006238!1.36e-19!69;UBERON:0000153!2.02e-17!129;UBERON:0007811!2.02e-17!129;UBERON:0000924!3.02e-17!173;UBERON:0006601!3.02e-17!173;UBERON:0004121!4.44e-17!169;UBERON:0000033!6.61e-17!123;UBERON:0002780!4.93e-16!41;UBERON:0001890!4.93e-16!41;UBERON:0006240!4.93e-16!41;UBERON:0003080!5.30e-16!42;UBERON:0007023!6.82e-16!115;UBERON:0000064!3.49e-14!219;UBERON:0002020!1.90e-13!34;UBERON:0003528!1.90e-13!34;UBERON:0001893!1.99e-13!34;UBERON:0002791!3.78e-13!33;UBERON:0001869!7.53e-13!32;UBERON:0003887!2.86e-12!21;UBERON:0000119!3.35e-12!312;UBERON:0000080!4.22e-12!18;UBERON:0002120!4.22e-12!18;UBERON:0004875!4.22e-12!18;UBERON:0005721!4.22e-12!18;UBERON:0005754!4.22e-12!18;UBERON:0007297!4.22e-12!18;UBERON:0000483!5.82e-12!309;UBERON:0006555!7.30e-12!17;UBERON:0005103!7.30e-12!17;UBERON:0000083!7.30e-12!17;UBERON:0009201!7.30e-12!17;UBERON:0004819!7.30e-12!17;UBERON:0006553!7.30e-12!17;UBERON:0003074!7.30e-12!17;UBERON:0003060!7.30e-12!17;UBERON:0004211!9.11e-12!16;UBERON:0001285!9.11e-12!16;UBERON:0007684!9.11e-12!16;UBERON:0003220!9.11e-12!16;UBERON:0004208!9.11e-12!16;UBERON:0000025!1.81e-11!194;UBERON:0002104!3.40e-11!21;UBERON:0004876!6.60e-11!20;UBERON:0000970!8.64e-11!20;UBERON:0000019!1.70e-10!19;UBERON:0000047!1.70e-10!19;UBERON:0004088!1.70e-10!19;UBERON:0003072!1.70e-10!19;UBERON:0003071!1.70e-10!19;UBERON:0004128!1.70e-10!19;UBERON:0000956!3.49e-10!25;UBERON:0000203!3.49e-10!25;UBERON:0000481!4.55e-10!347;UBERON:0001225!1.30e-09!13;UBERON:0008987!1.30e-09!13;UBERON:0001032!3.21e-09!24;UBERON:0004456!3.21e-09!24;UBERON:0009773!4.20e-09!12;UBERON:0001231!4.20e-09!12;UBERON:0004810!4.20e-09!12;UBERON:0000020!8.10e-09!23;UBERON:0001456!1.24e-08!21;UBERON:0002619!2.04e-08!22;UBERON:0000477!2.26e-08!286;UBERON:0003076!2.47e-08!15;UBERON:0003057!2.47e-08!15;UBERON:0000353!4.08e-08!17;UBERON:0001851!4.31e-08!16;UBERON:0000058!4.55e-08!26;UBERON:0007625!5.04e-08!11;UBERON:0004111!8.67e-08!241;UBERON:0001950!9.27e-08!20;UBERON:0004732!1.47e-07!13;UBERON:0000489!2.08e-07!32;UBERON:0000475!2.66e-07!365;UBERON:0001801!2.68e-07!14;UBERON:0004733!3.72e-07!12;UBERON:0002028!3.72e-07!12;UBERON:0007277!3.72e-07!12;UBERON:0000922!4.82e-07!612;UBERON:0002113!8.01e-07!27;UBERON:0003918!8.01e-07!27;UBERON:0005095!8.01e-07!27;UBERON:0007687!8.01e-07!27;UBERON:0000063!9.22e-07!97 | ||
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| ||
|short_description=p2@REC8 | |short_description=p2@REC8 | ||
}} | }} |
Latest revision as of 13:40, 19 September 2015
Short description: | p2@REC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_REC8_5end |
Coexpression cluster: | C3416_Alveolar_Renal_Mesothelial_Retinal_mesothelioma_mesenchymal_Ciliary |
Association with transcript: | 0bp_to_ENST00000557806, ENST00000559919, NM_001048205, NM_005132, uc001wmr.2, uc001wms.2_5end |
EntrezGene: | REC8 |
HGNC: | 16879 |
UniProt: | O95072 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 8.48e-15 | 15 |
kidney cell | 2.94e-12 | 17 |
kidney epithelial cell | 2.94e-12 | 17 |
kidney cortical cell | 4.23e-12 | 12 |
renal cortical epithelial cell | 4.23e-12 | 12 |
kidney tubule cell | 1.03e-10 | 10 |
nephron tubule epithelial cell | 1.03e-10 | 10 |
neural cell | 3.85e-08 | 25 |
glomerular cell | 1.26e-07 | 7 |
kidney corpuscule cell | 1.26e-07 | 7 |
neuronal stem cell | 5.13e-07 | 8 |