FFCP PHASE1:Hg19::chr2:175870085..175870133,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt=B4DV19,P15882 | |UniProt=B4DV19,P15882 | ||
|association_with_transcript=0bp_to_ENST00000409156,ENST00000488080,NM_001025201,NR_038133_5end | |association_with_transcript=0bp_to_ENST00000409156,ENST00000488080,NM_001025201,NR_038133_5end | ||
|cluster_id=chr2:175870085..175870133,- | |||
|description=CAGE_peak_3_at_CHN1_5end | |description=CAGE_peak_3_at_CHN1_5end | ||
|id=chr2:175870085..175870133,- | |id=chr2:175870085..175870133,- | ||
|ontology_enrichment_celltype=CL:0002319!3.11e-09!25;CL:0002139!2.78e-08!24;CL:0000133!4.16e-08!59;CL:0000115!1.36e-07!35 | |ontology_enrichment_celltype=CL:0002319!3.11e-09!25;CL:0002139!2.78e-08!24;CL:0000133!4.16e-08!59;CL:0000115!1.36e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002319;7.98e-10;25!CL:0002139;6.23e-09;24!CL:0000115;1.95e-07;36!CL:0000071;4.07e-07;18!CL:0002321;5.86e-07;15 | |ontology_enrichment_celltype_v019=CL:0002319;7.98e-10;25!CL:0002139;6.23e-09;24!CL:0000115;1.95e-07;36!CL:0000071;4.07e-07;18!CL:0002321;5.86e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.65e-10,25;CL:0002139,7.30e-09,24;CL:0000115,8.98e-09,36;CL:0000133,8.74e-08,59;CL:0002078,1.55e-07,45;CL:0000071,4.50e-07,18;CL:0002546,4.50e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.69e-09;82!CL:0002546;4.07e-07;18 | |ontology_enrichment_development_v019=UBERON:0006601;6.69e-09;82!CL:0002546;4.07e-07;18 | ||
|ontology_enrichment_disease=DOID:0050687!6.49e-08!143 | |ontology_enrichment_disease=DOID:0050687!6.49e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.88e-07,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.14e-18;32!UBERON:0002791;2.16e-18;32!UBERON:0003528;2.44e-18;34!UBERON:0002020;2.44e-18;34!UBERON:0001893;3.28e-18;34!UBERON:0002780;2.48e-17;41!UBERON:0001890;2.48e-17;41!UBERON:0000956;6.89e-16;25!UBERON:0000203;6.89e-16;25!UBERON:0000073;1.40e-15;53!UBERON:0002616;1.40e-15;53!UBERON:0002619;9.64e-14;22!UBERON:0001016;1.73e-13;83!UBERON:0000955;5.88e-13;68!UBERON:0001017;6.44e-13;75!UBERON:0001950;9.36e-13;20!UBERON:0004638;4.07e-07;18!UBERON:0001986;4.07e-07;18!UBERON:0004852;4.07e-07;18!UBERON:0002420;9.28e-07;9!UBERON:0007245;9.28e-07;9!UBERON:0010009;9.28e-07;9!UBERON:0010011;9.28e-07;9!UBERON:0000454;9.28e-07;9!UBERON:0007023;9.88e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0001869;2.14e-18;32!UBERON:0002791;2.16e-18;32!UBERON:0003528;2.44e-18;34!UBERON:0002020;2.44e-18;34!UBERON:0001893;3.28e-18;34!UBERON:0002780;2.48e-17;41!UBERON:0001890;2.48e-17;41!UBERON:0000956;6.89e-16;25!UBERON:0000203;6.89e-16;25!UBERON:0000073;1.40e-15;53!UBERON:0002616;1.40e-15;53!UBERON:0002619;9.64e-14;22!UBERON:0001016;1.73e-13;83!UBERON:0000955;5.88e-13;68!UBERON:0001017;6.44e-13;75!UBERON:0001950;9.36e-13;20!UBERON:0004638;4.07e-07;18!UBERON:0001986;4.07e-07;18!UBERON:0004852;4.07e-07;18!UBERON:0002420;9.28e-07;9!UBERON:0007245;9.28e-07;9!UBERON:0010009;9.28e-07;9!UBERON:0010011;9.28e-07;9!UBERON:0000454;9.28e-07;9!UBERON:0007023;9.88e-07;114 | ||
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| ||
|short_description=p3@CHN1 | |short_description=p3@CHN1 | ||
}} | }} |
Latest revision as of 08:14, 18 September 2015
Short description: | p3@CHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409156, ENST00000488080, NM_001025201, NR_038133_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | B4DV19P15882 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.65e-10 | 25 |
endothelial cell of vascular tree | 7.30e-09 | 24 |
endothelial cell | 8.98e-09 | 36 |
neurectodermal cell | 8.74e-08 | 59 |
meso-epithelial cell | 1.55e-07 | 45 |
blood vessel endothelial cell | 4.50e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.50e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.88e-07 | 143 |