FFCP PHASE1:Mm9::chr7:31230514..31230520,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11803 | |EntrezGene=11803 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |MCL_coexpression_id=20 | ||
|TSSclassifier=NA | |||
|UniProt=Q03157,E9Q910,Q3TUB1 | |UniProt=Q03157,E9Q910,Q3TUB1 | ||
|association_with_transcript=59bp_to_ENSMUST00000006828,ENSMUST00000098581,uc009gek.1,uc012fhn.1_5end | |association_with_transcript=59bp_to_ENSMUST00000006828,ENSMUST00000098581,uc009gek.1,uc012fhn.1_5end | ||
|cluster_id=chr7:31230514..31230520,- | |||
|description=CAGE_peak_3_at_Aplp1_5end | |description=CAGE_peak_3_at_Aplp1_5end | ||
|id=chr7:31230514..31230520,- | |id=chr7:31230514..31230520,- | ||
|ontology_enrichment_celltype=CL:0000117!3.01e-15!23;CL:0000337!3.01e-15!23;CL:0000540!7.04e-11!33;CL:0000047!7.04e-11!33;CL:0000031!7.04e-11!33;CL:0000404!7.04e-11!33;CL:0002319!2.82e-09!43;CL:0000221!2.93e-09!44;CL:0000133!2.93e-09!44;CL:0000393!6.04e-09!39;CL:0000211!6.04e-09!39;CL:0000055!1.65e-07!50 | |ontology_enrichment_celltype=CL:0000117!3.01e-15!23;CL:0000337!3.01e-15!23;CL:0000540!7.04e-11!33;CL:0000047!7.04e-11!33;CL:0000031!7.04e-11!33;CL:0000404!7.04e-11!33;CL:0002319!2.82e-09!43;CL:0000221!2.93e-09!44;CL:0000133!2.93e-09!44;CL:0000393!6.04e-09!39;CL:0000211!6.04e-09!39;CL:0000055!1.65e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.37e-21,23;CL:0000337,5.37e-21,23;CL:0000540,3.98e-13,33;CL:0000047,3.98e-13,33;CL:0000031,3.98e-13,33;CL:0000404,3.98e-13,33;CL:0000393,1.44e-11,39;CL:0000211,1.44e-11,39;CL:0002319,3.03e-11,43;CL:0000221,7.18e-11,44;CL:0000133,7.18e-11,44;CL:0002614,8.87e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.18e-34!71;UBERON:0003075!6.18e-34!71;UBERON:0007284!6.18e-34!71;UBERON:0001017!4.31e-30!73;UBERON:0005743!4.31e-30!73;UBERON:0000033!9.94e-30!63;UBERON:0001049!1.17e-29!52;UBERON:0005068!1.17e-29!52;UBERON:0006241!1.17e-29!52;UBERON:0007135!1.17e-29!52;UBERON:0000073!3.30e-29!75;UBERON:0001016!3.30e-29!75;UBERON:0000955!1.96e-28!50;UBERON:0006238!1.96e-28!50;UBERON:0004121!3.95e-28!102;UBERON:0000924!3.95e-28!102;UBERON:0006601!3.95e-28!102;UBERON:0002616!1.22e-27!49;UBERON:0003056!4.93e-27!49;UBERON:0003080!5.54e-24!40;UBERON:0002780!3.75e-23!39;UBERON:0001890!3.75e-23!39;UBERON:0006240!3.75e-23!39;UBERON:0002020!3.20e-21!34;UBERON:0002791!8.39e-18!29;UBERON:0003528!8.39e-18!29;UBERON:0001893!8.39e-18!29;UBERON:0007811!1.13e-14!86;UBERON:0000956!3.60e-12!21;UBERON:0001869!3.60e-12!21;UBERON:0000203!3.60e-12!21;UBERON:0000153!2.00e-11!94;UBERON:0002619!3.18e-10!17;UBERON:0000025!6.67e-08!114;UBERON:0002021!1.11e-07!10;UBERON:0000411!1.11e-07!10;UBERON:0001950!1.11e-07!10;UBERON:0004111!5.30e-07!122;UBERON:0002420!6.41e-07!8;UBERON:0007245!6.41e-07!8;UBERON:0010009!6.41e-07!8;UBERON:0010011!6.41e-07!8;UBERON:0000454!6.41e-07!8 | |ontology_enrichment_uberon=UBERON:0002346!6.18e-34!71;UBERON:0003075!6.18e-34!71;UBERON:0007284!6.18e-34!71;UBERON:0001017!4.31e-30!73;UBERON:0005743!4.31e-30!73;UBERON:0000033!9.94e-30!63;UBERON:0001049!1.17e-29!52;UBERON:0005068!1.17e-29!52;UBERON:0006241!1.17e-29!52;UBERON:0007135!1.17e-29!52;UBERON:0000073!3.30e-29!75;UBERON:0001016!3.30e-29!75;UBERON:0000955!1.96e-28!50;UBERON:0006238!1.96e-28!50;UBERON:0004121!3.95e-28!102;UBERON:0000924!3.95e-28!102;UBERON:0006601!3.95e-28!102;UBERON:0002616!1.22e-27!49;UBERON:0003056!4.93e-27!49;UBERON:0003080!5.54e-24!40;UBERON:0002780!3.75e-23!39;UBERON:0001890!3.75e-23!39;UBERON:0006240!3.75e-23!39;UBERON:0002020!3.20e-21!34;UBERON:0002791!8.39e-18!29;UBERON:0003528!8.39e-18!29;UBERON:0001893!8.39e-18!29;UBERON:0007811!1.13e-14!86;UBERON:0000956!3.60e-12!21;UBERON:0001869!3.60e-12!21;UBERON:0000203!3.60e-12!21;UBERON:0000153!2.00e-11!94;UBERON:0002619!3.18e-10!17;UBERON:0000025!6.67e-08!114;UBERON:0002021!1.11e-07!10;UBERON:0000411!1.11e-07!10;UBERON:0001950!1.11e-07!10;UBERON:0004111!5.30e-07!122;UBERON:0002420!6.41e-07!8;UBERON:0007245!6.41e-07!8;UBERON:0010009!6.41e-07!8;UBERON:0010011!6.41e-07!8;UBERON:0000454!6.41e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.24e-51,54;UBERON:0001017,2.82e-48,73;UBERON:0001049,7.90e-48,52;UBERON:0005068,7.90e-48,52;UBERON:0006241,7.90e-48,52;UBERON:0007135,7.90e-48,52;UBERON:0001016,1.11e-46,75;UBERON:0002346,9.45e-43,64;UBERON:0003075,9.45e-43,64;UBERON:0007284,9.45e-43,64;UBERON:0000955,6.30e-40,47;UBERON:0006238,6.30e-40,47;UBERON:0004121,2.73e-39,95;UBERON:0000924,2.73e-39,95;UBERON:0006601,2.73e-39,95;UBERON:0002616,2.49e-38,46;UBERON:0010371,4.01e-36,73;UBERON:0003080,6.82e-34,40;UBERON:0002780,3.16e-32,39;UBERON:0001890,3.16e-32,39;UBERON:0006240,3.16e-32,39;UBERON:0003056,1.19e-31,49;UBERON:0002020,9.67e-31,34;UBERON:0010314,8.93e-28,92;UBERON:0003528,1.07e-23,29;UBERON:0002791,1.07e-23,29;UBERON:0001893,1.07e-23,29;UBERON:0000025,4.60e-17,114;UBERON:0004111,3.00e-15,122;UBERON:0002021,3.86e-15,10;UBERON:0000411,3.86e-15,10;UBERON:0001950,3.86e-15,10;UBERON:0002619,5.92e-14,17;UBERON:0003076,1.65e-13,12;UBERON:0003057,1.65e-13,12;UBERON:0002420,1.85e-13,8;UBERON:0007245,1.85e-13,8;UBERON:0010009,1.85e-13,8;UBERON:0010011,1.85e-13,8;UBERON:0000454,1.85e-13,8;UBERON:0000956,1.12e-12,21;UBERON:0001869,1.12e-12,21;UBERON:0000203,1.12e-12,21;UBERON:0011216,7.27e-11,194;UBERON:0002240,2.72e-10,6;UBERON:0005174,2.72e-10,6;UBERON:0001137,2.72e-10,6;UBERON:0000483,1.76e-09,174;UBERON:0000119,2.99e-09,176;UBERON:0001894,3.89e-09,10;UBERON:0006222,3.89e-09,10;UBERON:0001948,1.82e-08,5;UBERON:0002315,1.82e-08,5;UBERON:0002950,1.89e-08,4;UBERON:0001891,1.89e-08,4;UBERON:0009616,1.89e-08,4;UBERON:0010286,1.89e-08,4;UBERON:0000369,2.64e-08,5;UBERON:0002435,2.64e-08,5;UBERON:0000204,2.64e-08,5;UBERON:0010082,2.64e-08,5;UBERON:0002038,8.87e-07,3;UBERON:0009663,8.87e-07,3;UBERON:0009661,8.87e-07,3;UBERON:0000125,8.87e-07,3;UBERON:0002308,8.87e-07,3 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0.22940928106717,0,0.430761996159075,0.646413698057667,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,1.55543919259427,0,0,0,0,0,0,0,1.03134418455488,3.23706337375356,1.5869729378161,4.43681982454325,0.338844532069132,0,0,0,0,0.599200221036809,1.53687322128622,0.933206510776299,0.810035629990144,0.841299845405528,6.56997264128748,5.07997644188711,0.979926393719632,0.287536413054709,2.75765635983006,6.60695285996332,12.5133591323484,11.8277030607307,2.37395317914349,2.8361169516747,2.6045668527838,16.4717969410815,10.1297269805702,9.16789486660861,1.76777151284201,2.70506193518296,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0,0,0,0,2.04946557908083,6.28340120440365,0.255457055208591,0,0,0,9.13722900369418,14.1825186873774,1.63350657746724,4.86708096538374,5.8814555185976,16.2074674756457,9.08551073179443,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0.689706313300419,0.720248519221397,1.20563854268572,1.29269348387523,0.896796041993948,1.03071897015702,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.828503090142008,0.234526059981096,0.180062061461015,0.473489471170421,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,6.9395683026162,0.617427674275707,0,0,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0,0,0,0.648414149624083,0.597423819763102,0,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.670025029767263,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,18.7844190285717,18.5194464815681,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,0,0,0.395287777946524,4.4984984299053,0,0.35613120733451,0,0,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0.614870295887855,0,0.727067458955011,0.356497378384721,0,0,0,2.04263763452273,0.18006109403131,1.03486947026204,0.643011105094777,2.12808280370728,2.49716344642899,1.31639216481697,1.8267896946876,0,0.21183207086382,0,0,0,0.120625849856312,0,0,0,24.4761398653873,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0.19318959403219,0,0,0,0,2.25900737046827,3.22227665555024,1.71868654031819,3.60891682921744,4.11049511862385,3.0215755895588,3.37511250115903,4.05289082901798,2.71885445390523,2.5888015587591,0.207574695168353,0,0.341467211508268,0.243106717068294,0,0,0.666740183404846,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.37456602987953,0.512201219238954,0.459483751644906,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0,0,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0.197008964751127,0,0.77468420592983,0.578719832943424,0.999242311751784,0.935726433781634,0.429742108096597,0,0.220591419119515,0.231867835620421 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|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0.22940928106717,0,0.430761996159075,0.646413698057667,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,1.55543919259427,0,0,0,0,0,0,0,1.03134418455488,3.23706337375356,1.5869729378161,4.43681982454325,0.338844532069132,0,0,0,0,0.599200221036809,1.53687322128622,0.933206510776299,0.810035629990144,0.841299845405528,6.56997264128748,5.07997644188711,0.979926393719632,0.287536413054709,2.75765635983006,6.60695285996332,12.5133591323484,11.8277030607307,2.37395317914349,2.8361169516747,2.6045668527838,16.4717969410815,10.1297269805702,9.16789486660861,1.76777151284201,2.70506193518296,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0,0,0,0,2.04946557908083,6.28340120440365,0.255457055208591,0,0,0,9.13722900369418,14.1825186873774,1.63350657746724,4.86708096538374,5.8814555185976,16.2074674756457,9.08551073179443,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0.689706313300419,0.720248519221397,1.20563854268572,1.29269348387523,0.896796041993948,1.03071897015702,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.828503090142008,0.234526059981096,0.180062061461015,0.473489471170421,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,6.9395683026162,0.617427674275707,0,0,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0,0,0,0.648414149624083,0.597423819763102,0,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.670025029767263,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,18.7844190285717,18.5194464815681,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,0,0,0.395287777946524,4.4984984299053,0,0.35613120733451,0,0,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0.614870295887855,0,0.727067458955011,0.356497378384721,0,0,0,2.04263763452273,0.18006109403131,1.03486947026204,0.643011105094777,2.12808280370728,2.49716344642899,1.31639216481697,1.8267896946876,0,0.21183207086382,0,0,0,0.120625849856312,0,0,0,24.4761398653873,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0.19318959403219,0,0,0,0,2.25900737046827,3.22227665555024,1.71868654031819,3.60891682921744,4.11049511862385,3.0215755895588,3.37511250115903,4.05289082901798,2.71885445390523,2.5888015587591,0.207574695168353,0,0.341467211508268,0.243106717068294,0,0,0.666740183404846,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.37456602987953,0.512201219238954,0.459483751644906,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0,0,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0.197008964751127,0,0.77468420592983,0.578719832943424,0.999242311751784,0.935726433781634,0.429742108096597,0,0.220591419119515,0.231867835620421 | ||
|short_description=p3@Aplp1 | |short_description=p3@Aplp1 | ||
}} | }} |
Latest revision as of 14:53, 26 September 2015
Short description: | p3@Aplp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Aplp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 59bp_to_ENSMUST00000006828, ENSMUST00000098581, uc009gek.1, uc012fhn.1_5end |
EntrezGene: | Aplp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.37e-21 | 23 |
neuroblast (sensu Vertebrata) | 5.37e-21 | 23 |
neuron | 3.98e-13 | 33 |
neuronal stem cell | 3.98e-13 | 33 |
neuroblast | 3.98e-13 | 33 |
electrically signaling cell | 3.98e-13 | 33 |
electrically responsive cell | 1.44e-11 | 39 |
electrically active cell | 1.44e-11 | 39 |
neural cell | 3.03e-11 | 43 |
ectodermal cell | 7.18e-11 | 44 |
neurectodermal cell | 7.18e-11 | 44 |
neuron of the substantia nigra | 8.87e-07 | 3 |