FFCP PHASE1:Hg19::chr5:110560115..110560134,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:110560115..110560134,+
|short_description=p2@CAMK4
|description=CAGE_peak_2_at_CAMK4_5end
|association_with_transcript=8bp_to_ENST00000514007_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=814 | |EntrezGene=814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1464 | |HGNC=1464 | ||
|TSSclassifier=strong | |||
|UniProt=D6REY7 | |UniProt=D6REY7 | ||
|association_with_transcript=8bp_to_ENST00000514007_5end | |||
|cluster_id=chr5:110560115..110560134,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_CAMK4_5end | |||
|id=chr5:110560115..110560134,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.32e-20!53;CL:0000051!1.32e-20!53;CL:0000838!4.45e-20!52;CL:0000084!8.11e-16!25;CL:0000827!8.11e-16!25;CL:0000791!1.04e-13!18;CL:0000789!1.04e-13!18;CL:0002420!1.04e-13!18;CL:0002419!1.04e-13!18;CL:0000790!1.04e-13!18;CL:0002087!2.31e-12!119;CL:0000738!1.99e-11!140;CL:0000625!3.64e-09!11;CL:0002031!6.56e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.78e-23;25!CL:0000791;6.53e-21;18!CL:0000789;6.53e-21;18!CL:0002419;6.53e-21;18!CL:0000625;1.19e-13;11!CL:0000542;1.28e-12;53!CL:0000624;1.32e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.41e-25,53;CL:0000051,4.41e-25,53;CL:0000838,2.77e-24,52;CL:0000084,2.79e-23,25;CL:0000827,2.79e-23,25;CL:0000791,7.36e-21,18;CL:0000789,7.36e-21,18;CL:0002420,7.36e-21,18;CL:0002419,7.36e-21,18;CL:0000790,7.36e-21,18;CL:0000625,1.22e-13,11;CL:0002087,1.10e-12,115;CL:0000738,1.09e-11,136;CL:0002031,1.04e-08,120;CL:0000624,1.35e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;6.53e-21;18!CL:0000051;1.28e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.96e-23!115;UBERON:0001049!7.60e-19!57;UBERON:0005068!7.60e-19!57;UBERON:0006241!7.60e-19!57;UBERON:0007135!7.60e-19!57;UBERON:0002780!8.16e-18!41;UBERON:0001890!8.16e-18!41;UBERON:0006240!8.16e-18!41;UBERON:0003080!6.54e-17!42;UBERON:0001893!2.33e-16!34;UBERON:0001017!2.80e-16!82;UBERON:0002020!3.38e-16!34;UBERON:0003528!3.38e-16!34;UBERON:0001869!4.22e-16!32;UBERON:0002791!6.28e-16!33;UBERON:0000073!2.17e-15!94;UBERON:0001016!2.17e-15!94;UBERON:0002616!5.11e-15!59;UBERON:0000955!7.27e-15!69;UBERON:0006238!7.27e-15!69;UBERON:0005743!8.77e-15!86;UBERON:0003075!1.20e-14!86;UBERON:0007284!1.20e-14!86;UBERON:0002346!2.67e-13!90;UBERON:0003056!1.32e-12!61;UBERON:0000153!3.26e-12!129;UBERON:0007811!3.26e-12!129;UBERON:0002619!3.53e-12!22;UBERON:0000956!4.05e-12!25;UBERON:0000203!4.05e-12!25;UBERON:0001950!2.43e-11!20;UBERON:0004121!5.81e-11!169;UBERON:0000924!3.00e-10!173;UBERON:0006601!3.00e-10!173;UBERON:0000033!4.24e-10!123;UBERON:0000178!1.18e-08!15;UBERON:0000179!1.18e-08!15;UBERON:0000463!1.18e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.85e-19;32!UBERON:0002619;1.98e-18;22!UBERON:0002791;3.21e-18;32!UBERON:0003528;3.79e-17;34!UBERON:0002020;3.79e-17;34!UBERON:0001950;4.39e-17;20!UBERON:0001893;4.70e-17;34!UBERON:0002780;7.89e-16;41!UBERON:0001890;7.89e-16;41!UBERON:0000956;2.10e-15;25!UBERON:0000203;2.10e-15;25!UBERON:0000073;5.36e-13;53!UBERON:0002616;5.36e-13;53!UBERON:0000955;3.27e-10;68!UBERON:0000178;3.10e-09;15!UBERON:0000179;3.10e-09;15!UBERON:0000463;3.10e-09;15!UBERON:0001017;4.12e-09;75!UBERON:0001016;3.93e-08;83!UBERON:0002420;7.44e-08;9!UBERON:0007245;7.44e-08;9!UBERON:0010009;7.44e-08;9!UBERON:0010011;7.44e-08;9!UBERON:0000454;7.44e-08;9!UBERON:0001871;2.73e-07;6!UBERON:0002390;3.17e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.30e-23,53;UBERON:0002616,1.30e-23,53;UBERON:0001049,8.28e-23,56;UBERON:0005068,8.28e-23,56;UBERON:0006241,8.28e-23,56;UBERON:0007135,8.28e-23,56;UBERON:0002780,1.20e-21,41;UBERON:0001890,1.20e-21,41;UBERON:0003080,1.20e-21,41;UBERON:0006240,1.20e-21,41;UBERON:0001869,1.42e-21,32;UBERON:0007023,3.04e-20,114;UBERON:0001016,4.27e-20,89;UBERON:0002791,6.01e-20,32;UBERON:0001893,9.86e-20,34;UBERON:0001017,1.29e-19,81;UBERON:0003528,1.91e-19,34;UBERON:0002020,1.91e-19,34;UBERON:0000955,4.68e-19,68;UBERON:0006238,4.68e-19,68;UBERON:0002619,2.00e-18,22;UBERON:0003075,1.44e-17,82;UBERON:0007284,1.44e-17,82;UBERON:0003056,3.07e-17,61;UBERON:0001950,4.29e-17,20;UBERON:0002346,5.01e-16,86;UBERON:0000956,2.11e-15,25;UBERON:0000203,2.11e-15,25;UBERON:0010371,9.28e-13,104;UBERON:0004121,1.26e-09,171;UBERON:0000924,1.26e-09,171;UBERON:0006601,1.26e-09,171;UBERON:0000178,3.32e-09,15;UBERON:0000179,3.32e-09,15;UBERON:0000463,3.32e-09,15;UBERON:0011216,4.27e-08,223;UBERON:0002420,6.94e-08,9;UBERON:0007245,6.94e-08,9;UBERON:0010009,6.94e-08,9;UBERON:0010011,6.94e-08,9;UBERON:0000454,6.94e-08,9;UBERON:0010314,2.21e-07,132;UBERON:0001871,2.59e-07,6;UBERON:0004177,3.32e-07,7;UBERON:0005057,3.32e-07,7 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0.730310090387373,0,0.369363174230364,0,0,0.85870796139317,0.273748850145768,0.627713197974014,6.41872608282791,5.99334302984604,5.03749000407547,0.393364276848904,5.75744097145819,2.01260960310899,0,0,0.369754010166788,0,0.142169232487422,0,2.21598163412751,3.81034450193269,7.37836960433896,0.447830948479849,3.2389366601898,0.515151135268373,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0,0.256160706529101,0.47296445977717,0.344745680736619,1.29096936716765,1.35426486594342,0.564727018627814,0.818718450173537,0.224723484445085,0.612167784741805,0.641858054152187,0.639337125799041,0,0.797854630486527,0,0.290209238628584,1.70215567407342,0.622822248995575,0.75374599577023,1.5644487552606,0.217188844705117,1.21079900526674,1.47311054395026,0.632924774881769,0,0,0,0,0,0,0,0,0,3.51992488922645,0.546138611262131,0,0.853460445133014,0.400395987036012,0.574752439954483,1.32208974556972,0.954053754535364,2.84606484554724,0.587237189370939,1.91136614062614,0,8.40762844472304,0,55.4721551721009,38.122043986669,37.0082698199117,19.0592604745373,66.4881423932524,49.2385717964123,72.0858895109272,12.3665607142543,33.2904675446566,31.014745241707,33.3088752430969,10.1192142583283,9.23421367675135,24.6656856905514,20.4499013161528,19.7066098299836,72.0672696967614,81.5999525673625,82.5830638059317,18.5827322024009,41.3878133090075,25.084803520232,34.1576584226329,29.626583532141,30.6009223312517,19.0090408889675,34.1805520306544,36.9881306236269,29.983374372563,34.3327015463824,27.0972238983945,27.6201238217883,19.2556940964125,38.6681158367073,0,0.670700859703636,0.12786256184353,0,0,0,0,0,1.89069634328136,3.32594096193846,4.21606971327005,2.0956652079634,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,1.11437250398869,0,0,0,0,0,0,0.835979866147242,0,0.35576626268671,0,0.402829317109147,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,3.9534125230819,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0.326923806226917,0,0,0,0.936480230490962,0,0,0.352303495931295,0.161872944368132,0.561803226808994,0,0.737005903870608,0,1.18800285728205,0.494533858557114,0,0,0.336672227908132,0.500474079487857,0,0.877955241761676,0.612975591598039,2.25357088359895,0.567160915800105,0.179389635688862,0,0.423863802319124,0,0,0,0.18611685633159,0,0.292311015483596,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.8231480226628,0,1.26755034821831,0,1.18157981336281,31.3438800584402,0,1.54411029268673,0,0,0,0,0,0,0,0.34779121492523,4.10930429825376,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.871901815541886,0.383382679165211,0.492663237895943,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,1.42636905040718,0,0,0.179060963239896,1.2329365839288,14.1862147345388,13.1532820664306,16.299565607528,0.254094624222463,3.90419561572865,7.73288812777695,6.8681668787083,10.2070200264506,0,0,1.24324654030811,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0.260650843404249,0,0,22.9512508996405,15.5314224589404,21.7724217919026,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0.616838775210622,0.355123450626254,0.328508624055237,1.03850885836724,0,0,0,0,0.459257792658427,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0.863663664408557,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0.457847324091717,0.41254749960294,0,0,0,0,0.616194468458578,0,0,0,0.145016693914229,0.681813019328807,0,0.165284915360978,0.192190067365106,0,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0.141405431953713,1.13008116620243,0,0.66343897524122,0,0,0,0.405820753925408,0.92947049429925,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,1.34060455107157,0,0.376575203107117,0,0,0,0,10.1489521846434,9.1756464857085,11.3929437434833,11.1968934465161,11.5181436464134,6.48473311192717,11.3406601820004,10.3106272918255,0,0,0,8.17533970553162,0,26.6070494123069,4.3045093636782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,1.00299045849731,0.284136146806413,0,0.890894042497916,0,16.9005100120271,9.56552031591487,0.111308705022906,0.329607748453519,0,1.79323189425963,8.84108529699673,0.251932747854276,0,5.16956182936492,0,0,0,0,0.690503839458535,7.18449277040819,0,6.78532922266653,3.06134723934109,11.9768278800717,0,0.0874599999961957,0,0.341380344856499,0,0,1.37897349296586,4.66567381413207,11.8064996554639,33.6581726609259,36.05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| ||
|short_description=p2@CAMK4 | |||
}} | }} |
Latest revision as of 17:10, 19 September 2015
Short description: | p2@CAMK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAMK4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 8bp_to_ENST00000514007_5end |
EntrezGene: | CAMK4 |
HGNC: | 1464 |
UniProt: | D6REY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.41e-25 | 53 |
common lymphoid progenitor | 4.41e-25 | 53 |
lymphoid lineage restricted progenitor cell | 2.77e-24 | 52 |
T cell | 2.79e-23 | 25 |
pro-T cell | 2.79e-23 | 25 |
mature alpha-beta T cell | 7.36e-21 | 18 |
alpha-beta T cell | 7.36e-21 | 18 |
immature T cell | 7.36e-21 | 18 |
mature T cell | 7.36e-21 | 18 |
immature alpha-beta T cell | 7.36e-21 | 18 |
CD8-positive, alpha-beta T cell | 1.22e-13 | 11 |
nongranular leukocyte | 1.10e-12 | 115 |
leukocyte | 1.09e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.04e-08 | 120 |
CD4-positive, alpha-beta T cell | 1.35e-08 | 6 |