FFCP PHASE1:Hg19::chr5:89854636..89854651,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:89854636..89854651,+
|short_description=p2@GPR98
|description=CAGE_peak_2_at_GPR98_5end
|association_with_transcript=19bp_to_ENST00000405460,NM_032119,NR_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84059 | |EntrezGene=84059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17416 | |HGNC=17416 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WXG9 | |UniProt=Q8WXG9 | ||
|association_with_transcript=19bp_to_ENST00000405460,NM_032119,NR_003149,uc003kjt.2,uc003kju.2_5end | |||
|cluster_id=chr5:89854636..89854651,+ | |||
|description=CAGE_peak_2_at_GPR98_5end | |||
|id=chr5:89854636..89854651,+ | |||
|ontology_enrichment_celltype=CL:0002319!8.69e-13!25;CL:0000047!3.75e-11!8;CL:0000540!8.09e-09!6;CL:0000031!8.09e-09!6;CL:0000404!8.09e-09!6;CL:0002322!1.98e-07!5;CL:0000133!2.95e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.68e-13;25!CL:0002322;8.71e-12;5!CL:0000540;8.83e-11;6!CL:0000404;8.83e-11;6!CL:0002605;3.65e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.44e-15,8;CL:0002319,1.99e-13,25;CL:0002322,5.88e-12,5;CL:0000540,1.00e-10,6;CL:0000031,1.00e-10,6;CL:0000404,1.00e-10,6;CL:0002605,3.16e-09,3;CL:0000133,7.97e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;8.83e-11;6!UBERON:0006215;3.59e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.24e-49!86;UBERON:0001017!2.37e-49!82;UBERON:0000073!1.39e-47!94;UBERON:0001016!1.39e-47!94;UBERON:0001049!3.87e-46!57;UBERON:0005068!3.87e-46!57;UBERON:0006241!3.87e-46!57;UBERON:0007135!3.87e-46!57;UBERON:0002616!3.19e-42!59;UBERON:0003080!3.50e-42!42;UBERON:0002780!3.31e-41!41;UBERON:0001890!3.31e-41!41;UBERON:0006240!3.31e-41!41;UBERON:0000955!1.34e-40!69;UBERON:0006238!1.34e-40!69;UBERON:0002346!1.63e-36!90;UBERON:0003075!2.45e-36!86;UBERON:0007284!2.45e-36!86;UBERON:0003056!3.02e-36!61;UBERON:0001869!3.37e-35!32;UBERON:0001893!7.68e-35!34;UBERON:0002791!8.20e-34!33;UBERON:0002020!2.06e-32!34;UBERON:0003528!2.06e-32!34;UBERON:0000956!8.86e-28!25;UBERON:0000203!8.86e-28!25;UBERON:0000153!1.50e-25!129;UBERON:0007811!1.50e-25!129;UBERON:0000033!1.02e-24!123;UBERON:0000924!2.54e-24!173;UBERON:0006601!2.54e-24!173;UBERON:0004121!9.16e-24!169;UBERON:0002619!1.39e-23!22;UBERON:0007023!1.93e-23!115;UBERON:0001950!5.20e-21!20;UBERON:0000025!1.90e-09!194;UBERON:0000064!2.71e-09!219;UBERON:0002420!3.63e-09!9;UBERON:0007245!3.63e-09!9;UBERON:0010009!3.63e-09!9;UBERON:0010011!3.63e-09!9;UBERON:0000454!3.63e-09!9;UBERON:0001871!6.00e-09!7;UBERON:0004111!9.98e-09!241;UBERON:0000483!2.04e-08!309;UBERON:0000200!2.19e-08!6;UBERON:0000349!3.36e-08!5;UBERON:0000119!3.78e-08!312;UBERON:0000477!4.31e-08!286;UBERON:0001894!1.12e-07!7;UBERON:0006222!1.12e-07!7;UBERON:0000481!1.67e-07!347;UBERON:0002021!1.90e-07!5;UBERON:0003296!2.73e-07!4;UBERON:0010133!2.73e-07!4;UBERON:0004733!3.50e-07!12;UBERON:0002028!3.50e-07!12;UBERON:0007277!3.50e-07!12;UBERON:0000475!6.12e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;9.50e-35;25!UBERON:0000203;9.50e-35;25!UBERON:0002791;7.08e-33;32!UBERON:0001869;3.91e-32;32!UBERON:0002780;1.91e-30;41!UBERON:0001890;1.91e-30;41!UBERON:0003528;1.11e-28;34!UBERON:0002020;1.11e-28;34!UBERON:0001893;4.57e-28;34!UBERON:0002619;7.37e-28;22!UBERON:0000073;1.62e-25;53!UBERON:0002616;1.62e-25;53!UBERON:0001950;1.14e-23;20!UBERON:0000955;1.52e-18;68!UBERON:0001017;5.38e-18;75!UBERON:0001016;1.59e-14;83!UBERON:0000349;3.95e-13;5!UBERON:0003296;8.69e-12;4!UBERON:0010133;8.69e-12;4!UBERON:0001894;1.29e-09;7!UBERON:0001871;2.06e-09;6!UBERON:0002021;1.79e-08;5!UBERON:0001870;9.13e-08;3!UBERON:0002420;5.12e-07;9!UBERON:0007245;5.12e-07;9!UBERON:0010009;5.12e-07;9!UBERON:0010011;5.12e-07;9!UBERON:0000454;5.12e-07;9!UBERON:0001905;5.60e-07;2!UBERON:0002757;5.60e-07;2!UBERON:0010134;5.60e-07;2!UBERON:0005408;5.60e-07;2!UBERON:0001899;5.60e-07;2!UBERON:0000200;8.22e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.88e-46,81;UBERON:0002780,3.96e-41,41;UBERON:0001890,3.96e-41,41;UBERON:0003080,3.96e-41,41;UBERON:0006240,3.96e-41,41;UBERON:0001016,1.99e-40,89;UBERON:0000073,1.99e-40,53;UBERON:0002616,1.99e-40,53;UBERON:0001049,8.39e-38,56;UBERON:0005068,8.39e-38,56;UBERON:0006241,8.39e-38,56;UBERON:0007135,8.39e-38,56;UBERON:0000955,7.82e-36,68;UBERON:0006238,7.82e-36,68;UBERON:0002791,2.11e-35,32;UBERON:0001869,2.11e-35,32;UBERON:0000956,8.73e-35,25;UBERON:0000203,8.73e-35,25;UBERON:0003528,5.41e-33,34;UBERON:0002020,5.41e-33,34;UBERON:0001893,5.41e-33,34;UBERON:0003056,1.56e-29,61;UBERON:0002619,7.51e-28,22;UBERON:0003075,1.15e-26,82;UBERON:0007284,1.15e-26,82;UBERON:0002346,5.36e-25,86;UBERON:0001950,1.24e-23,20;UBERON:0011216,1.65e-21,223;UBERON:0010371,4.36e-19,104;UBERON:0004121,8.14e-17,171;UBERON:0000924,8.14e-17,171;UBERON:0006601,8.14e-17,171;UBERON:0010314,3.70e-14,132;UBERON:0000349,2.57e-13,5;UBERON:0003296,1.04e-11,4;UBERON:0010133,1.04e-11,4;UBERON:0000025,1.01e-10,192;UBERON:0007023,1.38e-10,114;UBERON:0001894,1.65e-09,7;UBERON:0006222,1.65e-09,7;UBERON:0001871,1.87e-09,6;UBERON:0002021,2.19e-08,5;UBERON:0001870,8.50e-08,3;UBERON:0004111,2.68e-07,240;UBERON:0002420,4.01e-07,9;UBERON:0007245,4.01e-07,9;UBERON:0010009,4.01e-07,9;UBERON:0010011,4.01e-07,9;UBERON:0000454,4.01e-07,9;UBERON:0001905,5.62e-07,2;UBERON:0002757,5.62e-07,2;UBERON:0010134,5.62e-07,2;UBERON:0005408,5.62e-07,2;UBERON:0001899,5.62e-07,2;UBERON:0000200,8.04e-07,6 | |||
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| ||
|short_description=p2@GPR98 | |||
}} | }} |
Latest revision as of 04:42, 19 September 2015
Short description: | p2@GPR98 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPR98_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000405460, NM_032119, NR_003149, uc003kjt.2, uc003kju.2_5end |
EntrezGene: | GPR98 |
HGNC: | 17416 |
UniProt: | Q8WXG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.44e-15 | 8 |
neural cell | 1.99e-13 | 25 |
embryonic stem cell | 5.88e-12 | 5 |
neuron | 1.00e-10 | 6 |
neuroblast | 1.00e-10 | 6 |
electrically signaling cell | 1.00e-10 | 6 |
astrocyte of the cerebral cortex | 3.16e-09 | 3 |
neurectodermal cell | 7.97e-07 | 59 |