FFCP PHASE1:Hg19::chr19:51071649..51071703,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25042 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NT99,F5GYR9 | |||
|association_with_transcript=-347bp_to_ENST00000389201,ENST00000535879,NM_001080457,uc002pss.2_5end | |||
|cluster_id=chr19:51071649..51071703,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_LRRC4B_5end | |||
|id=chr19:51071649..51071703,- | |||
|ontology_enrichment_celltype=CL:0000047!9.77e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.67e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.46e-09,8;CL:0002319,3.66e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.29e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.07e-48!86;UBERON:0001017!5.53e-48!82;UBERON:0000073!1.23e-47!94;UBERON:0001016!1.23e-47!94;UBERON:0001049!9.91e-45!57;UBERON:0005068!9.91e-45!57;UBERON:0006241!9.91e-45!57;UBERON:0007135!9.91e-45!57;UBERON:0002346!5.57e-43!90;UBERON:0003075!1.09e-40!86;UBERON:0007284!1.09e-40!86;UBERON:0000955!2.46e-38!69;UBERON:0006238!2.46e-38!69;UBERON:0007023!4.36e-38!115;UBERON:0002616!1.05e-37!59;UBERON:0003080!2.79e-35!42;UBERON:0002780!5.66e-35!41;UBERON:0001890!5.66e-35!41;UBERON:0006240!5.66e-35!41;UBERON:0000924!1.63e-30!173;UBERON:0006601!1.63e-30!173;UBERON:0002020!2.91e-30!34;UBERON:0003528!2.91e-30!34;UBERON:0001893!4.21e-30!34;UBERON:0002791!3.08e-29!33;UBERON:0001869!6.88e-29!32;UBERON:0004121!1.51e-28!169;UBERON:0003056!6.05e-28!61;UBERON:0000153!1.34e-25!129;UBERON:0007811!1.34e-25!129;UBERON:0000033!3.58e-25!123;UBERON:0000956!4.79e-23!25;UBERON:0000203!4.79e-23!25;UBERON:0002619!2.57e-21!22;UBERON:0001950!1.57e-19!20;UBERON:0000025!2.86e-18!194;UBERON:0004111!1.13e-13!241;UBERON:0000483!6.58e-13!309;UBERON:0000119!2.15e-12!312;UBERON:0000477!3.96e-12!286;UBERON:0000922!9.62e-12!612;UBERON:0000481!5.88e-11!347;UBERON:0003076!1.98e-10!15;UBERON:0003057!1.98e-10!15;UBERON:0000064!2.45e-10!219;UBERON:0002050!2.56e-09!605;UBERON:0005423!2.56e-09!605;UBERON:0000923!5.87e-09!604;UBERON:0005291!5.87e-09!604;UBERON:0006598!5.87e-09!604;UBERON:0002532!5.87e-09!604;UBERON:0000475!7.02e-09!365;UBERON:0002420!8.54e-09!9;UBERON:0007245!8.54e-09!9;UBERON:0010009!8.54e-09!9;UBERON:0010011!8.54e-09!9;UBERON:0000454!8.54e-09!9;UBERON:0004732!8.62e-09!13;UBERON:0002308!1.29e-08!9;UBERON:0000125!1.29e-08!9;UBERON:0001871!2.40e-08!7;UBERON:0004733!4.12e-08!12;UBERON:0002028!4.12e-08!12;UBERON:0007277!4.12e-08!12;UBERON:0000468!1.07e-07!659;UBERON:0009663!5.52e-07!7;UBERON:0002298!7.24e-07!8;UBERON:0000200!7.69e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.86e-36;32!UBERON:0003528;7.93e-36;34!UBERON:0002020;7.93e-36;34!UBERON:0002791;1.11e-35;32!UBERON:0001893;1.19e-35;34!UBERON:0002780;1.29e-34;41!UBERON:0001890;1.29e-34;41!UBERON:0000073;4.52e-33;53!UBERON:0002616;4.52e-33;53!UBERON:0000956;1.35e-31;25!UBERON:0000203;1.35e-31;25!UBERON:0002619;3.69e-29;22!UBERON:0001950;1.16e-26;20!UBERON:0000955;7.90e-24;68!UBERON:0001017;1.40e-22;75!UBERON:0001016;3.44e-22;83!UBERON:0000922;3.80e-17;49!UBERON:0004732;6.14e-12;13!UBERON:0002420;1.21e-11;9!UBERON:0007245;1.21e-11;9!UBERON:0010009;1.21e-11;9!UBERON:0010011;1.21e-11;9!UBERON:0000454;1.21e-11;9!UBERON:0000125;2.11e-11;9!UBERON:0002308;2.11e-11;9!UBERON:0004733;5.42e-11;12!UBERON:0002028;5.42e-11;12!UBERON:0007023;1.12e-10;114!UBERON:0001871;9.96e-10;6!UBERON:0009663;3.99e-09;7!UBERON:0000200;5.98e-09;6!UBERON:0011216;1.95e-08;132!UBERON:0001894;3.98e-08;7!UBERON:0002680;4.21e-08;9!UBERON:0001895;4.21e-08;9!UBERON:0000349;7.92e-08;5!UBERON:0002298;8.10e-08;6!UBERON:0002021;1.00e-07;5!UBERON:0001872;1.35e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.46e-66,81;UBERON:0001016,1.93e-64,89;UBERON:0001049,7.40e-62,56;UBERON:0005068,7.40e-62,56;UBERON:0006241,7.40e-62,56;UBERON:0007135,7.40e-62,56;UBERON:0000073,2.87e-58,53;UBERON:0002616,2.87e-58,53;UBERON:0000955,2.44e-52,68;UBERON:0006238,2.44e-52,68;UBERON:0002346,1.16e-49,86;UBERON:0002780,2.52e-48,41;UBERON:0001890,2.52e-48,41;UBERON:0003080,2.52e-48,41;UBERON:0006240,2.52e-48,41;UBERON:0003075,9.85e-48,82;UBERON:0007284,9.85e-48,82;UBERON:0003528,1.02e-41,34;UBERON:0002020,1.02e-41,34;UBERON:0001893,1.71e-41,34;UBERON:0001869,8.60e-40,32;UBERON:0002791,2.37e-39,32;UBERON:0003056,7.44e-37,61;UBERON:0010371,1.52e-36,104;UBERON:0007023,4.69e-34,114;UBERON:0004121,9.34e-34,171;UBERON:0000924,9.34e-34,171;UBERON:0006601,9.34e-34,171;UBERON:0010314,8.11e-32,132;UBERON:0000956,1.33e-31,25;UBERON:0000203,1.33e-31,25;UBERON:0002619,3.54e-29,22;UBERON:0011216,9.49e-28,223;UBERON:0001950,1.12e-26,20;UBERON:0000025,6.16e-18,192;UBERON:0003076,3.17e-14,15;UBERON:0003057,3.17e-14,15;UBERON:0004111,1.66e-12,240;UBERON:0004732,6.26e-12,13;UBERON:0002420,1.15e-11,9;UBERON:0007245,1.15e-11,9;UBERON:0010009,1.15e-11,9;UBERON:0010011,1.15e-11,9;UBERON:0000454,1.15e-11,9;UBERON:0000125,2.06e-11,9;UBERON:0002308,2.06e-11,9;UBERON:0000922,4.42e-11,592;UBERON:0004733,5.55e-11,12;UBERON:0002028,5.55e-11,12;UBERON:0007277,5.55e-11,12;UBERON:0001871,9.37e-10,6;UBERON:0009663,3.83e-09,7;UBERON:0000483,4.75e-09,306;UBERON:0000200,6.07e-09,6;UBERON:0000119,9.72e-09,309;UBERON:0001894,3.88e-08,7;UBERON:0006222,3.88e-08,7;UBERON:0002680,4.33e-08,9;UBERON:0001895,4.33e-08,9;UBERON:0010092,4.33e-08,9;UBERON:0000349,7.78e-08,5;UBERON:0002298,8.22e-08,6;UBERON:0002021,1.01e-07,5;UBERON:0005423,1.14e-07,581;UBERON:0001872,1.36e-07,5;UBERON:0002050,8.69e-07,564 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,1.34465029290355,1.20538905604795,0,0,3.0780264519197,0,9.40364164434263,12.3081474466354,4.24310717725941,12.0520934011011,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0.221729397462564,0.087834785693126,10.6093051153147,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,1.13061588384802,3.35599548967925,1.6507082516404,0.835979866147242,0,0,0,0.402829317109147,3.04108842287405,0.488124115096339,0,0,0.267899184852239,0,0,0,0,0.732806975721629,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,6.4049397437823,0,0,1.48181739276657,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.625592599359821,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68434348616451,8.21684563593209,9.29551542956147,16.1711245823978,6.81266297364197,7.2995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,2.80483547606892,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.4921026786043,0,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0.190493682876507,2.29193055334967,3.51652341630141,0,0.102827492703324,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,17.483483869456,23.5314033822079,8.89759621520308,0,0,0,0,0,0,0,0,0,0,0,0,0,32.7782065246978,22.1237751557957,20.1055091322201,26.9701187188302,23.603733811167,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0.902399225814824,1.61732207919271,3.13739907670742,0,0.527758144464379,0,0.170093705276516,0,0,0.270946437543853,3.01013864312912,0.254876273045038,0,0,0,0,4.10320200186223,0.328014645699706,0,1.44257416306811,0.183138929636687,0,0.574265537996172,0,0,0.096670718292122,0,0.460511024178389,0.137836572484531,0.537101224341368,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,6.94356462328575,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,20.0507581672054,0,0,0,0,0,0.307240764308458,2.01308497103174,0.500547425135725,0,0.835218521685727,0,0,0,0,0.18714054040822,0.146508179271894,2.18448939149124,0,0,0,0,0,65.6137447525757,96.0772114083802,0,0,0.211125408127993,0.796991953004279,1.10513566212459,0,0,0,0,0,0,0,1.1837208676432,0,0,42.6506408281896,43.1371656452608,97.8107610205851,0,0,1.44999915086959,0,0,0,0,6.4153014944316,0.173624994933292,30.1152071176705,53.5448187496811,16.7839909948792,31.2939305605366,22.7571666594232,73.9328788408887,0,0,25.0857842722378,0,0.23056390438806,0,0,0,0,0,0,0,0,2.48155226678899,2.35275041181287,3.02078856556517,1.51802986179348,0,0,0,0.141353071433941,0,1.99052386215701,0.973033209536731,2.4441205797345,0,0,0,14.3564413248842,9.63093176758547,33.4998157387235,0,0,0,0,3.62972148145992,62.43884337262,2.14834370736859,3.60776206594782,1.86638744515045,1.32930774541437,0,2.19753042885058,3.58417289318877,7.39984819677461,5.54698692052555,0,0,0,1.04836000945218,0,0,0,0,0.775912131907355,13.1501628770335,14.4627674099541,0,0,50.7752583566147,10.1686719022098,0,0.85381197895741,3.79638258206047,0,1.71804894248874,0,0,5.46711156487903,0,16.0366963166865,19.8745407993433,0,0,25.2176521258112,29.8453725984545,0,0,0,0.279282401272254,0.916641696046735,1.43574604915363,0.199679000498991,0,1.56220020209311,4.56847612909739,0.360299883542404,0,0,0,0,0,0,47.7137813885582,86.3529594747389,2.41129722697529,3.71356478812531,7.47792608452533,0,0,64.2122813875321,0,0.236417121897595,21.6637448997542,19.3248615830514,0.179287339332845,0,2.85878130549347,0,0.25426853765475,0,0,0,4.7892076624995,0.738832686744051,0.511164065356265,1.35974509824151,0,0,55.2038223663821,29.2234049851345,0.171086837884329,0,0.747511887973863,5.18774206828898,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,40.7591362784814,68.7007871398053,83.6275417119419,17.2022758707021,16.4174996274541,28.8748273677433,0.138348634936231,0,2.12308764558307,9.13489067343896,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0.465788870628778,0,0,0.521745061811734,4.0569554429249,0.380805212168795,0,0,0.859284456339908,0,0,0,0,0,0,0,7.07657251537255,1.56596575179127,0,0,0,0,8.95524196766819,0,0,0,0.168942440653073,3.33113974164331,0,0,76.8716905003623,0.194860308839388,0,0.163565394255844,0,0,0,0,0.213383459388282,0,0,0,0,0,6.39471856518258,0,6.13337173237996,0.218419276384028,0.339465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| |||
|short_description=p1@LRRC4B | |||
}} |
Latest revision as of 12:15, 19 September 2015
Short description: | p1@LRRC4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC4B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -347bp_to_ENST00000389201, ENST00000535879, NM_001080457, uc002pss.2_5end |
EntrezGene: | LRRC4B |
HGNC: | 25042 |
UniProt: | Q9NT99F5GYR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.46e-09 | 8 |
neural cell | 3.66e-07 | 25 |