FFCP PHASE1:Hg19::chr9:115915412..115915416,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:115915412..115915416,+
|short_description=p@chr9:115915412..115915416,+
|description=CAGE_peak_at_chr9:115915412..115915416,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:115915412..115915416,+ | |||
|coexpression_cluster_id=C2936 | |||
|description=CAGE_peak_at_chr9:115915412..115915416,+ | |||
|id=chr9:115915412..115915416,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.21e-34!76;CL:0002057!6.10e-30!42;CL:0000860!2.20e-29!45;CL:0002194!1.63e-28!63;CL:0000576!1.63e-28!63;CL:0000040!1.63e-28!63;CL:0000559!1.63e-28!63;CL:0002009!7.12e-28!65;CL:0000557!9.63e-28!71;CL:0000839!1.83e-27!70;CL:0000763!2.74e-25!112;CL:0000049!2.74e-25!112;CL:0000738!1.37e-19!140;CL:0000037!2.08e-16!172;CL:0000566!2.08e-16!172;CL:0002032!5.26e-16!165;CL:0000837!5.26e-16!165;CL:0002087!2.34e-15!119;CL:0002031!1.30e-14!124;CL:0000988!3.20e-14!182;CL:0000094!8.22e-07!8;CL:0002393!9.49e-07!9;CL:0002397!9.49e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-46;33!CL:0002057;1.53e-46;33!CL:0000473;2.20e-38;39!CL:0000234;2.20e-38;39!CL:0000576;2.97e-38;48!CL:0000766;7.72e-29;69!CL:0000094;1.16e-12;8!CL:0000763;2.12e-12;100!CL:0002393;4.63e-10;6!CL:0002397;4.63e-10;6!CL:0002087;7.26e-09;104!CL:0000081;1.01e-08;11!CL:0000738;7.96e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.77e-62,72;CL:0000860,9.13e-61,42;CL:0002057,9.13e-61,42;CL:0000473,1.55e-59,48;CL:0000234,1.55e-59,48;CL:0002194,1.44e-51,59;CL:0000576,1.44e-51,59;CL:0000040,1.44e-51,59;CL:0000559,1.44e-51,59;CL:0002009,2.24e-49,61;CL:0000839,1.03e-48,66;CL:0000557,9.52e-48,67;CL:0000763,8.35e-37,108;CL:0000049,8.35e-37,108;CL:0000738,2.59e-31,136;CL:0002087,1.28e-24,115;CL:0002031,6.71e-23,120;CL:0000037,9.61e-22,168;CL:0002032,1.72e-21,161;CL:0000837,1.72e-21,161;CL:0000988,1.05e-19,177;CL:0000094,7.42e-13,8;CL:0002393,6.84e-11,9;CL:0002397,6.84e-11,9;CL:0000081,7.43e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-44;42!CL:0000049;4.09e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.92e-27!102;UBERON:0003061!3.92e-27!102;UBERON:0002371!7.69e-23!80;UBERON:0002193!9.14e-23!112;UBERON:0001474!3.93e-20!86;UBERON:0004765!8.81e-17!101;UBERON:0001434!8.81e-17!101;UBERON:0007023!6.52e-16!115;UBERON:0002405!3.78e-14!115;UBERON:0001049!1.11e-12!57;UBERON:0005068!1.11e-12!57;UBERON:0006241!1.11e-12!57;UBERON:0007135!1.11e-12!57;UBERON:0002780!1.50e-10!41;UBERON:0001890!1.50e-10!41;UBERON:0006240!1.50e-10!41;UBERON:0002020!1.68e-10!34;UBERON:0003528!1.68e-10!34;UBERON:0001893!1.82e-10!34;UBERON:0002791!5.17e-10!33;UBERON:0003080!5.55e-10!42;UBERON:0000955!7.57e-10!69;UBERON:0006238!7.57e-10!69;UBERON:0002616!9.62e-10!59;UBERON:0001869!3.13e-09!32;UBERON:0001017!6.62e-09!82;UBERON:0005743!4.13e-08!86;UBERON:0000073!3.90e-07!94;UBERON:0001016!3.90e-07!94;UBERON:0002308!9.62e-07!9;UBERON:0000125!9.62e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.31e-12;34!UBERON:0003528;1.10e-11;34!UBERON:0002020;1.10e-11;34!UBERON:0002780;1.47e-11;41!UBERON:0001890;1.47e-11;41!UBERON:0002791;5.98e-11;32!UBERON:0001869;1.01e-10;32!UBERON:0000073;1.03e-10;53!UBERON:0002616;1.03e-10;53!UBERON:0000125;1.28e-10;9!UBERON:0002308;1.28e-10;9!UBERON:0002298;2.12e-09;6!UBERON:0002619;8.93e-09;22!UBERON:0001950;1.74e-08;20!UBERON:0009663;4.45e-08;7!UBERON:0000178;1.23e-07;15!UBERON:0000179;1.23e-07;15!UBERON:0000463;1.23e-07;15!UBERON:0000956;2.15e-07;25!UBERON:0000203;2.15e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.91e-42,98;UBERON:0003061,1.91e-42,98;UBERON:0002371,3.26e-40,76;UBERON:0002193,8.35e-37,108;UBERON:0001474,4.08e-36,82;UBERON:0004765,7.33e-33,90;UBERON:0002405,5.40e-30,93;UBERON:0001434,2.39e-29,100;UBERON:0001049,8.72e-20,56;UBERON:0005068,8.72e-20,56;UBERON:0006241,8.72e-20,56;UBERON:0007135,8.72e-20,56;UBERON:0000073,2.17e-18,53;UBERON:0002616,2.17e-18,53;UBERON:0007023,9.34e-18,114;UBERON:0002780,1.36e-15,41;UBERON:0001890,1.36e-15,41;UBERON:0003080,1.36e-15,41;UBERON:0006240,1.36e-15,41;UBERON:0003528,7.97e-15,34;UBERON:0002020,7.97e-15,34;UBERON:0001893,9.19e-15,34;UBERON:0000955,3.21e-14,68;UBERON:0006238,3.21e-14,68;UBERON:0002791,9.56e-13,32;UBERON:0001017,1.92e-12,81;UBERON:0001869,2.00e-12,32;UBERON:0003081,2.87e-12,203;UBERON:0003075,1.11e-11,82;UBERON:0007284,1.11e-11,82;UBERON:0002204,1.36e-11,167;UBERON:0001016,2.93e-11,89;UBERON:0002346,9.92e-11,86;UBERON:0000125,2.06e-10,9;UBERON:0002308,2.06e-10,9;UBERON:0003056,2.12e-09,61;UBERON:0002298,2.58e-09,6;UBERON:0002619,4.97e-09,22;UBERON:0001950,1.06e-08,20;UBERON:0010371,4.85e-08,104;UBERON:0002050,7.14e-08,564;UBERON:0009663,7.99e-08,7;UBERON:0000923,1.00e-07,560;UBERON:0010316,1.00e-07,560;UBERON:0005291,1.00e-07,560;UBERON:0006598,1.00e-07,560;UBERON:0010317,1.00e-07,560;UBERON:0002532,1.00e-07,560;UBERON:0000956,1.30e-07,25;UBERON:0000203,1.30e-07,25;UBERON:0000178,1.58e-07,15;UBERON:0000179,1.58e-07,15;UBERON:0000463,1.58e-07,15;UBERON:0005423,7.04e-07,581 | |||
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| ||
|short_description=p@chr9:115915412..115915416,+ | |||
}} | }} |
Latest revision as of 21:54, 31 July 2015
Short description: | p@chr9:115915412..115915416, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:115915412..115915416, + |
Coexpression cluster: | C2936_CD14_parotid_salivary_submaxillary_corpus_Mallassezderived_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.77e-62 | 72 |
classical monocyte | 9.13e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.13e-61 | 42 |
defensive cell | 1.55e-59 | 48 |
phagocyte | 1.55e-59 | 48 |
monopoietic cell | 1.44e-51 | 59 |
monocyte | 1.44e-51 | 59 |
monoblast | 1.44e-51 | 59 |
promonocyte | 1.44e-51 | 59 |
macrophage dendritic cell progenitor | 2.24e-49 | 61 |
myeloid lineage restricted progenitor cell | 1.03e-48 | 66 |
granulocyte monocyte progenitor cell | 9.52e-48 | 67 |
myeloid cell | 8.35e-37 | 108 |
common myeloid progenitor | 8.35e-37 | 108 |
leukocyte | 2.59e-31 | 136 |
nongranular leukocyte | 1.28e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 6.71e-23 | 120 |
hematopoietic stem cell | 9.61e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.72e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-21 | 161 |
hematopoietic cell | 1.05e-19 | 177 |
granulocyte | 7.42e-13 | 8 |
intermediate monocyte | 6.84e-11 | 9 |
CD14-positive, CD16-positive monocyte | 6.84e-11 | 9 |
blood cell | 7.43e-09 | 11 |