FFCP PHASE1:Hg19::chr3:146738715..146738721,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:146738715..146738721,- | |||
|description=CAGE_peak_at_chr3:146738715..146738721,- | |||
|id=chr3:146738715..146738721,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2!CL:0000214;1.10e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.10e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.14e-74;3!UBERON:0005425;6.72e-26;1!UBERON:0003056;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.75e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004732!6.95e-27!13;UBERON:0004733!1.58e-23!12;UBERON:0002028!1.58e-23!12;UBERON:0007277!1.58e-23!12;UBERON:0003076!5.77e-23!15;UBERON:0003057!5.77e-23!15;UBERON:0001049!4.61e-20!57;UBERON:0005068!4.61e-20!57;UBERON:0006241!4.61e-20!57;UBERON:0007135!4.61e-20!57;UBERON:0005743!1.97e-19!86;UBERON:0002680!2.93e-19!9;UBERON:0001895!2.93e-19!9;UBERON:0010092!2.93e-19!9;UBERON:0002616!3.24e-19!59;UBERON:0001017!6.47e-19!82;UBERON:0000073!8.82e-19!94;UBERON:0001016!8.82e-19!94;UBERON:0002346!9.25e-17!90;UBERON:0003075!3.49e-16!86;UBERON:0007284!3.49e-16!86;UBERON:0000955!1.84e-15!69;UBERON:0006238!1.84e-15!69;UBERON:0002298!7.24e-11!8;UBERON:0002037!8.76e-11!6;UBERON:0006215!8.76e-11!6;UBERON:0000988!1.14e-10!3;UBERON:0000924!4.21e-10!173;UBERON:0006601!4.21e-10!173;UBERON:0002020!6.64e-10!34;UBERON:0003528!6.64e-10!34;UBERON:0007023!1.36e-09!115;UBERON:0004121!1.39e-09!169;UBERON:0002148!8.18e-08!2;UBERON:0009662!8.18e-08!2;UBERON:0000033!1.36e-07!123;UBERON:0001869!4.23e-07!32;UBERON:0000153!4.93e-07!129;UBERON:0007811!4.93e-07!129;UBERON:0000025!5.89e-07!194;UBERON:0002791!7.60e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.04e-37;6!UBERON:0004732;8.12e-31;13!UBERON:0000941;6.72e-26;1!UBERON:0001785;6.72e-26;1!UBERON:0002464;6.72e-26;1!UBERON:0004904;6.72e-26;1!UBERON:0001021;6.72e-26;1!UBERON:0002680;1.92e-25;9!UBERON:0001895;1.92e-25;9!UBERON:0004733;2.73e-19;12!UBERON:0002028;2.73e-19;12!UBERON:0003714;1.14e-13;2!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0006915;1.10e-09;3!UBERON:0007616;1.10e-09;3!UBERON:0002217;1.10e-09;3!UBERON:0002018;1.10e-09;3!UBERON:0001016;2.82e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.19e-38,6;UBERON:0006215,9.19e-38,6;UBERON:0004732,7.24e-31,13;UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0002680,1.77e-25,9;UBERON:0001895,1.77e-25,9;UBERON:0010092,1.77e-25,9;UBERON:0004733,2.56e-19,12;UBERON:0002028,2.56e-19,12;UBERON:0007277,2.56e-19,12;UBERON:0003076,1.31e-15,15;UBERON:0003057,1.31e-15,15;UBERON:0003714,1.07e-13,2;UBERON:0005162,1.07e-13,2;UBERON:0000122,1.07e-13,2;UBERON:0001016,8.97e-10,89;UBERON:0006915,1.10e-09,3;UBERON:0007616,1.10e-09,3;UBERON:0002217,1.10e-09,3;UBERON:0002018,1.10e-09,3;UBERON:0000073,9.09e-08,53;UBERON:0002616,9.09e-08,53;UBERON:0003075,1.09e-07,82;UBERON:0007284,1.09e-07,82;UBERON:0001017,1.12e-07,81;UBERON:0001781,1.69e-07,4;UBERON:0001049,2.23e-07,56;UBERON:0005068,2.23e-07,56;UBERON:0006241,2.23e-07,56;UBERON:0007135,2.23e-07,56;UBERON:0002346,2.42e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0.111443384277478,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,1.52581736317083,1.3269511191747,4.43321428430321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09394961803644,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,1.54596118010839,0,0,0.754814217833368,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,2.99765968167051,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:146738715..146738721,- | |||
}} |
Latest revision as of 16:41, 29 July 2015
Short description: | p@chr3:146738715..146738721, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:146738715..146738721, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.49e-07 | 4 |