FFCP PHASE1:Mm9::chr1:134288235..134288259,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=68875|HGNC=|MCL_coexpression_id=1|UniProt=Q80W04|association_with_transcript=-377bp_to_ENSMUST00000045473,NM_178874,uc007cot.1_5end|description=CAGE_peak_5_at_Tmcc2_5end|id=chr1:134288235..134288259,-|ontology_enrichment_celltype=CL:0000540!8.44e-18!33;CL:0000047!8.44e-18!33;CL:0000031!8.44e-18!33;CL:0000404!8.44e-18!33;CL:0000221!2.12e-16!44;CL:0000133!2.12e-16!44;CL:0000393!3.20e-16!39;CL:0000211!3.20e-16!39;CL:0002319!4.01e-16!43;CL:0000055!2.32e-14!50;CL:0000117!2.49e-14!23;CL:0000337!2.49e-14!23|ontology_enrichment_celltype_v019_2=CL:0000540,1.75e-28,33;CL:0000047,1.75e-28,33;CL:0000031,1.75e-28,33;CL:0000404,1.75e-28,33;CL:0000117,2.69e-27,23;CL:0000337,2.69e-27,23;CL:0000393,8.55e-23,39;CL:0000211,8.55e-23,39;CL:0002319,6.76e-20,43;CL:0000221,2.96e-19,44;CL:0000133,2.96e-19,44;CL:0002321,3.47e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.72e-32!75;UBERON:0001016!1.72e-32!75;UBERON:0001017!2.23e-32!73;UBERON:0005743!2.23e-32!73;UBERON:0004121!1.17e-27!102;UBERON:0000924!1.17e-27!102;UBERON:0006601!1.17e-27!102;UBERON:0001049!1.06e-23!52;UBERON:0005068!1.06e-23!52;UBERON:0006241!1.06e-23!52;UBERON:0007135!1.06e-23!52;UBERON:0002346!3.46e-23!71;UBERON:0003075!3.46e-23!71;UBERON:0007284!3.46e-23!71;UBERON:0000955!2.09e-22!50;UBERON:0006238!2.09e-22!50;UBERON:0002616!1.07e-21!49;UBERON:0000033!1.59e-21!63;UBERON:0002020!2.97e-17!34;UBERON:0003080!6.94e-17!40;UBERON:0003056!1.59e-16!49;UBERON:0002780!3.45e-16!39;UBERON:0001890!3.45e-16!39;UBERON:0006240!3.45e-16!39;UBERON:0002791!5.28e-14!29;UBERON:0003528!5.28e-14!29;UBERON:0001893!5.28e-14!29;UBERON:0000025!1.66e-09!114;UBERON:0000956!2.86e-09!21;UBERON:0001869!2.86e-09!21;UBERON:0000203!2.86e-09!21;UBERON:0004111!5.47e-09!122;UBERON:0007811!6.41e-09!86;UBERON:0000153!2.65e-08!94;UBERON:0003076!1.74e-07!12;UBERON:0003057!1.74e-07!12;UBERON:0002619!3.00e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.03e-51,73;UBERON:0001016,3.33e-49,75;UBERON:0000073,2.41e-44,54;UBERON:0001049,3.08e-41,52;UBERON:0005068,3.08e-41,52;UBERON:0006241,3.08e-41,52;UBERON:0007135,3.08e-41,52;UBERON:0002346,2.10e-36,64;UBERON:0003075,2.10e-36,64;UBERON:0007284,2.10e-36,64;UBERON:0004121,8.26e-36,95;UBERON:0000924,8.26e-36,95;UBERON:0006601,8.26e-36,95;UBERON:0000955,5.54e-34,47;UBERON:0006238,5.54e-34,47;UBERON:0002616,1.49e-32,46;UBERON:0002020,7.55e-32,34;UBERON:0010371,2.39e-30,73;UBERON:0003080,5.98e-29,40;UBERON:0002780,1.67e-27,39;UBERON:0001890,1.67e-27,39;UBERON:0006240,1.67e-27,39;UBERON:0003528,6.66e-25,29;UBERON:0002791,6.66e-25,29;UBERON:0001893,6.66e-25,29;UBERON:0003056,6.65e-22,49;UBERON:0010314,1.75e-21,92;UBERON:0000956,6.43e-15,21;UBERON:0001869,6.43e-15,21;UBERON:0000203,6.43e-15,21;UBERON:0000025,5.45e-14,114;UBERON:0004111,2.67e-12,122;UBERON:0003076,3.39e-12,12;UBERON:0003057,3.39e-12,12;UBERON:0002420,1.24e-11,8;UBERON:0007245,1.24e-11,8;UBERON:0010009,1.24e-11,8;UBERON:0010011,1.24e-11,8;UBERON:0000454,1.24e-11,8;UBERON:0011216,1.50e-11,194;UBERON:0002619,9.82e-11,17;UBERON:0002240,8.78e-10,6;UBERON:0005174,8.78e-10,6;UBERON:0001137,8.78e-10,6;UBERON:0002021,9.19e-10,10;UBERON:0000411,9.19e-10,10;UBERON:0001950,9.19e-10,10;UBERON:0001948,2.96e-08,5;UBERON:0002315,2.96e-08,5;UBERON:0002950,1.20e-07,4;UBERON:0001891,1.20e-07,4;UBERON:0009616,1.20e-07,4;UBERON:0010286,1.20e-07,4;UBERON:0000369,4.34e-07,5;UBERON:0002435,4.34e-07,5;UBERON:0000204,4.34e-07,5;UBERON:0010082,4.34e-07,5;UBERON:0000483,8.39e-07,174|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.917733760808408,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0,0,0.573066879877513,0.515672092277442,2.42779753031517,1.5869729378161,3.1691570175309,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,2.28117147078651,2.43010688997043,1.05162480675691,6.28432165688368,4.8591079009355,1.34739879136449,1.15014565221884,0.919218786610021,3.30347642998166,8.93811366596314,7.98753972932466,2.37395317914349,2.37867873366265,1.56274011167028,8.65467296904281,6.75315132038016,6.72312290217964,3.83017161115768,3.84403538157578,3.16879057903011,0.302904773332736,0.604572480854284,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0.704217098883403,0,0,0,0,0.253359865475099,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,2.92780797011547,6.70229461803056,0.255457055208591,0.11981512450592,0,0.127070227073065,6.5907881338122,2.28750301409313,2.63874139437015,4.86708096538374,4.60287823194595,3.94797284663164,4.2182728397617,0.101839363850316,0.248813941220186,0,0.631325567659422,0.260240885925407,0.689706313300419,0.180062129805349,0.30140963567143,0.544291993210623,0.384341160854549,0.374806898238915,0.258703370739016,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0,0.696504333044333,0,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0.232533944750408,0,0.467061369468678,0,0,0.324275238183423,0,0.658650345873152,0.134206418760372,7.36014819974445,1.13195073617213,0,0,0.213288250535234,0,0.38660238396628,0.80673409849337,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0,0.296452627087149,0.166845105716094,0.589676985339609,0.674586337154561,0.202860121388503,1.20588579876208,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0.37898282354097,0.651859905768103,0.339490171550376,0,0,0,0.390267295715598,0,1.10732344824387,0.478364305972461,0.81931657357869,0.172684981865896,0.723245292907558,0,0.54390568381871,0,0.275936746304732,4.0137647496948,4.10240903072711,0.163934945376675,0.252470927204373,1.26203287766503,1.17131623288992,1.50796378412959,0.955875191810208,0.891194696329576,0.283076530788832,2.83367491172426,1.46127928955656,1.58115111178609,4.4984984299053,0.567760340833074,0.35613120733451,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0.377210159511796,1.18120757152309,0,0,0.363533729477506,0,0,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0.428674070063185,1.06404140185364,1.42695054081656,0.493647061806363,2.13125464380219,0.23467170806371,0.42366414172764,0,0.32977250588296,0.645857706783622,0.120625849856312,0,0.328281799490123,0,7.04616147639937,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0,0.674321731924103,0.41326727862668,0.523511883968059,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.388902376688095,0.387479470433193,0.506868376472335,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.36630324853453,0.214368379079066,0,1.12950368523413,0.460325236507177,1.71868654031819,1.03111909406213,3.42541259885321,3.7769694869485,4.05013500139084,2.2516060161211,1.81256963593682,2.07104124700728,0.518936737920883,0.399024873401031,0.341467211508268,1.21553358534147,0.628839487883947,1.10306105070008,0.222246727801615,0,0.320919209591815,0.252697211763798,1.2673964994512,0,0.936415074698824,0.576226371643824,0.976402972245426,1.42888107384922,0.811190281613988,0.578727661391115,0.412085900803307,0.294397840268795,0,0.70990322463735,0.715308569841963,0.436039249896986,0.470546902076653,0.423073039458382,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,1.42362021749009,0.689531376628944,1.22769312950907,0.154936841185966,0.385813221962283,0.999242311751784,0,0,0.765153328275374,0.441182838239031,0.231867835620421|short_description=p5@Tmcc2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68875 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80W04 | |||
|association_with_transcript=-377bp_to_ENSMUST00000045473,NM_178874,uc007cot.1_5end | |||
|cluster_id=chr1:134288235..134288259,- | |||
|description=CAGE_peak_5_at_Tmcc2_5end | |||
|id=chr1:134288235..134288259,- | |||
|ontology_enrichment_celltype=CL:0000540!8.44e-18!33;CL:0000047!8.44e-18!33;CL:0000031!8.44e-18!33;CL:0000404!8.44e-18!33;CL:0000221!2.12e-16!44;CL:0000133!2.12e-16!44;CL:0000393!3.20e-16!39;CL:0000211!3.20e-16!39;CL:0002319!4.01e-16!43;CL:0000055!2.32e-14!50;CL:0000117!2.49e-14!23;CL:0000337!2.49e-14!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.75e-28,33;CL:0000047,1.75e-28,33;CL:0000031,1.75e-28,33;CL:0000404,1.75e-28,33;CL:0000117,2.69e-27,23;CL:0000337,2.69e-27,23;CL:0000393,8.55e-23,39;CL:0000211,8.55e-23,39;CL:0002319,6.76e-20,43;CL:0000221,2.96e-19,44;CL:0000133,2.96e-19,44;CL:0002321,3.47e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.72e-32!75;UBERON:0001016!1.72e-32!75;UBERON:0001017!2.23e-32!73;UBERON:0005743!2.23e-32!73;UBERON:0004121!1.17e-27!102;UBERON:0000924!1.17e-27!102;UBERON:0006601!1.17e-27!102;UBERON:0001049!1.06e-23!52;UBERON:0005068!1.06e-23!52;UBERON:0006241!1.06e-23!52;UBERON:0007135!1.06e-23!52;UBERON:0002346!3.46e-23!71;UBERON:0003075!3.46e-23!71;UBERON:0007284!3.46e-23!71;UBERON:0000955!2.09e-22!50;UBERON:0006238!2.09e-22!50;UBERON:0002616!1.07e-21!49;UBERON:0000033!1.59e-21!63;UBERON:0002020!2.97e-17!34;UBERON:0003080!6.94e-17!40;UBERON:0003056!1.59e-16!49;UBERON:0002780!3.45e-16!39;UBERON:0001890!3.45e-16!39;UBERON:0006240!3.45e-16!39;UBERON:0002791!5.28e-14!29;UBERON:0003528!5.28e-14!29;UBERON:0001893!5.28e-14!29;UBERON:0000025!1.66e-09!114;UBERON:0000956!2.86e-09!21;UBERON:0001869!2.86e-09!21;UBERON:0000203!2.86e-09!21;UBERON:0004111!5.47e-09!122;UBERON:0007811!6.41e-09!86;UBERON:0000153!2.65e-08!94;UBERON:0003076!1.74e-07!12;UBERON:0003057!1.74e-07!12;UBERON:0002619!3.00e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.03e-51,73;UBERON:0001016,3.33e-49,75;UBERON:0000073,2.41e-44,54;UBERON:0001049,3.08e-41,52;UBERON:0005068,3.08e-41,52;UBERON:0006241,3.08e-41,52;UBERON:0007135,3.08e-41,52;UBERON:0002346,2.10e-36,64;UBERON:0003075,2.10e-36,64;UBERON:0007284,2.10e-36,64;UBERON:0004121,8.26e-36,95;UBERON:0000924,8.26e-36,95;UBERON:0006601,8.26e-36,95;UBERON:0000955,5.54e-34,47;UBERON:0006238,5.54e-34,47;UBERON:0002616,1.49e-32,46;UBERON:0002020,7.55e-32,34;UBERON:0010371,2.39e-30,73;UBERON:0003080,5.98e-29,40;UBERON:0002780,1.67e-27,39;UBERON:0001890,1.67e-27,39;UBERON:0006240,1.67e-27,39;UBERON:0003528,6.66e-25,29;UBERON:0002791,6.66e-25,29;UBERON:0001893,6.66e-25,29;UBERON:0003056,6.65e-22,49;UBERON:0010314,1.75e-21,92;UBERON:0000956,6.43e-15,21;UBERON:0001869,6.43e-15,21;UBERON:0000203,6.43e-15,21;UBERON:0000025,5.45e-14,114;UBERON:0004111,2.67e-12,122;UBERON:0003076,3.39e-12,12;UBERON:0003057,3.39e-12,12;UBERON:0002420,1.24e-11,8;UBERON:0007245,1.24e-11,8;UBERON:0010009,1.24e-11,8;UBERON:0010011,1.24e-11,8;UBERON:0000454,1.24e-11,8;UBERON:0011216,1.50e-11,194;UBERON:0002619,9.82e-11,17;UBERON:0002240,8.78e-10,6;UBERON:0005174,8.78e-10,6;UBERON:0001137,8.78e-10,6;UBERON:0002021,9.19e-10,10;UBERON:0000411,9.19e-10,10;UBERON:0001950,9.19e-10,10;UBERON:0001948,2.96e-08,5;UBERON:0002315,2.96e-08,5;UBERON:0002950,1.20e-07,4;UBERON:0001891,1.20e-07,4;UBERON:0009616,1.20e-07,4;UBERON:0010286,1.20e-07,4;UBERON:0000369,4.34e-07,5;UBERON:0002435,4.34e-07,5;UBERON:0000204,4.34e-07,5;UBERON:0010082,4.34e-07,5;UBERON:0000483,8.39e-07,174 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.917733760808408,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0,0,0.573066879877513,0.515672092277442,2.42779753031517,1.5869729378161,3.1691570175309,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,2.28117147078651,2.43010688997043,1.05162480675691,6.28432165688368,4.8591079009355,1.34739879136449,1.15014565221884,0.919218786610021,3.30347642998166,8.93811366596314,7.98753972932466,2.37395317914349,2.37867873366265,1.56274011167028,8.65467296904281,6.75315132038016,6.72312290217964,3.83017161115768,3.84403538157578,3.16879057903011,0.302904773332736,0.604572480854284,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0.704217098883403,0,0,0,0,0.253359865475099,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,2.92780797011547,6.70229461803056,0.255457055208591,0.11981512450592,0,0.127070227073065,6.5907881338122,2.28750301409313,2.63874139437015,4.86708096538374,4.60287823194595,3.94797284663164,4.2182728397617,0.101839363850316,0.248813941220186,0,0.631325567659422,0.260240885925407,0.689706313300419,0.180062129805349,0.30140963567143,0.544291993210623,0.384341160854549,0.374806898238915,0.258703370739016,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0,0.696504333044333,0,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0.232533944750408,0,0.467061369468678,0,0,0.324275238183423,0,0.658650345873152,0.134206418760372,7.36014819974445,1.13195073617213,0,0,0.213288250535234,0,0.38660238396628,0.80673409849337,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0,0.296452627087149,0.166845105716094,0.589676985339609,0.674586337154561,0.202860121388503,1.20588579876208,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0.37898282354097,0.651859905768103,0.339490171550376,0,0,0,0.390267295715598,0,1.10732344824387,0.478364305972461,0.81931657357869,0.172684981865896,0.723245292907558,0,0.54390568381871,0,0.275936746304732,4.0137647496948,4.10240903072711,0.163934945376675,0.252470927204373,1.26203287766503,1.17131623288992,1.50796378412959,0.955875191810208,0.891194696329576,0.283076530788832,2.83367491172426,1.46127928955656,1.58115111178609,4.4984984299053,0.567760340833074,0.35613120733451,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0.377210159511796,1.18120757152309,0,0,0.363533729477506,0,0,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0.428674070063185,1.06404140185364,1.42695054081656,0.493647061806363,2.13125464380219,0.23467170806371,0.42366414172764,0,0.32977250588296,0.645857706783622,0.120625849856312,0,0.328281799490123,0,7.04616147639937,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0,0.674321731924103,0.41326727862668,0.523511883968059,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.388902376688095,0.387479470433193,0.506868376472335,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.36630324853453,0.214368379079066,0,1.12950368523413,0.460325236507177,1.71868654031819,1.03111909406213,3.42541259885321,3.7769694869485,4.05013500139084,2.2516060161211,1.81256963593682,2.07104124700728,0.518936737920883,0.399024873401031,0.341467211508268,1.21553358534147,0.628839487883947,1.10306105070008,0.222246727801615,0,0.320919209591815,0.252697211763798,1.2673964994512,0,0.936415074698824,0.576226371643824,0.976402972245426,1.42888107384922,0.811190281613988,0.578727661391115,0.412085900803307,0.294397840268795,0,0.70990322463735,0.715308569841963,0.436039249896986,0.470546902076653,0.423073039458382,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,1.42362021749009,0.689531376628944,1.22769312950907,0.154936841185966,0.385813221962283,0.999242311751784,0,0,0.765153328275374,0.441182838239031,0.231867835620421 | |||
|short_description=p5@Tmcc2 | |||
}} |
Latest revision as of 09:07, 26 September 2015
Short description: | p5@Tmcc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tmcc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -377bp_to_ENSMUST00000045473, NM_178874, uc007cot.1_5end |
EntrezGene: | Tmcc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.75e-28 | 33 |
neuronal stem cell | 1.75e-28 | 33 |
neuroblast | 1.75e-28 | 33 |
electrically signaling cell | 1.75e-28 | 33 |
CNS neuron (sensu Vertebrata) | 2.69e-27 | 23 |
neuroblast (sensu Vertebrata) | 2.69e-27 | 23 |
electrically responsive cell | 8.55e-23 | 39 |
electrically active cell | 8.55e-23 | 39 |
neural cell | 6.76e-20 | 43 |
ectodermal cell | 2.96e-19 | 44 |
neurectodermal cell | 2.96e-19 | 44 |
embryonic cell | 3.47e-09 | 70 |