FFCP PHASE1:Hg19::chr12:117799419..117799440,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:117799419..117799440,- to FFCP PHASE1:Hg19::chr12:117799419..117799440,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4842 | |EntrezGene=4842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7872 | |HGNC=7872 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477584_5end | |||
|cluster_id=chr12:117799419..117799440,- | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_5_at_NOS1_5end | |||
|id=chr12:117799419..117799440,- | |||
|ontology_enrichment_celltype=CL:0000453!4.85e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;6.08e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,6.08e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.95e-16;2!UBERON:0006215;6.28e-11;3!UBERON:0006222;6.90e-09;1!UBERON:0006601;8.51e-09;82!UBERON:0001045;1.47e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.44e-67!57;UBERON:0005068!3.44e-67!57;UBERON:0006241!3.44e-67!57;UBERON:0007135!3.44e-67!57;UBERON:0002616!4.12e-58!59;UBERON:0002346!2.72e-56!90;UBERON:0000955!4.53e-55!69;UBERON:0006238!4.53e-55!69;UBERON:0001017!6.22e-54!82;UBERON:0005743!4.88e-53!86;UBERON:0002780!7.60e-52!41;UBERON:0001890!7.60e-52!41;UBERON:0006240!7.60e-52!41;UBERON:0003075!2.23e-51!86;UBERON:0007284!2.23e-51!86;UBERON:0003080!2.10e-50!42;UBERON:0000073!8.92e-47!94;UBERON:0001016!8.92e-47!94;UBERON:0002020!2.56e-45!34;UBERON:0003528!2.56e-45!34;UBERON:0001893!1.08e-44!34;UBERON:0001869!1.50e-44!32;UBERON:0002791!8.99e-43!33;UBERON:0000153!2.14e-40!129;UBERON:0007811!2.14e-40!129;UBERON:0007023!2.71e-40!115;UBERON:0000033!1.19e-39!123;UBERON:0003056!1.21e-38!61;UBERON:0001950!1.87e-38!20;UBERON:0002619!3.20e-38!22;UBERON:0000924!2.18e-33!173;UBERON:0006601!2.18e-33!173;UBERON:0000956!4.26e-33!25;UBERON:0000203!4.26e-33!25;UBERON:0004121!6.71e-30!169;UBERON:0003076!3.88e-17!15;UBERON:0003057!3.88e-17!15;UBERON:0001871!6.11e-17!7;UBERON:0004733!9.29e-15!12;UBERON:0002028!9.29e-15!12;UBERON:0007277!9.29e-15!12;UBERON:0000064!1.56e-14!219;UBERON:0002308!1.75e-13!9;UBERON:0000125!1.75e-13!9;UBERON:0004732!1.80e-13!13;UBERON:0002420!2.22e-13!9;UBERON:0007245!2.22e-13!9;UBERON:0010009!2.22e-13!9;UBERON:0010011!2.22e-13!9;UBERON:0000454!2.22e-13!9;UBERON:0000200!1.07e-12!6;UBERON:0000481!1.52e-11!347;UBERON:0000025!2.50e-11!194;UBERON:0001872!4.92e-11!5;UBERON:0000369!5.33e-11!4;UBERON:0002435!5.33e-11!4;UBERON:0000204!5.33e-11!4;UBERON:0010082!5.33e-11!4;UBERON:0004111!1.37e-10!241;UBERON:0000475!1.86e-10!365;UBERON:0002298!2.22e-10!8;UBERON:0009663!2.26e-09!7;UBERON:0000062!2.46e-09!511;UBERON:0002680!2.59e-09!9;UBERON:0001895!2.59e-09!9;UBERON:0010092!2.59e-09!9;UBERON:0005383!9.58e-09!3;UBERON:0005382!9.58e-09!3;UBERON:0001894!1.88e-08!7;UBERON:0006222!1.88e-08!7;UBERON:0000988!3.56e-08!3;UBERON:0000483!3.72e-08!309;UBERON:0000477!4.35e-08!286;UBERON:0000119!5.88e-08!312;UBERON:0000349!6.38e-08!5;UBERON:0002021!6.98e-08!5;UBERON:0001896!1.25e-07!3;UBERON:0005290!1.25e-07!3;UBERON:0010096!1.25e-07!3;UBERON:0000922!2.85e-07!612;UBERON:0000923!4.08e-07!604;UBERON:0005291!4.08e-07!604;UBERON:0006598!4.08e-07!604;UBERON:0002532!4.08e-07!604;UBERON:0002050!4.51e-07!605;UBERON:0005423!4.51e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;1.28e-39;9!UBERON:0002308;1.28e-39;9!UBERON:0000369;3.53e-30;4!UBERON:0002435;3.53e-30;4!UBERON:0000204;3.53e-30;4!UBERON:0002420;9.10e-30;9!UBERON:0007245;9.10e-30;9!UBERON:0010009;9.10e-30;9!UBERON:0010011;9.10e-30;9!UBERON:0000454;9.10e-30;9!UBERON:0009663;8.89e-27;7!UBERON:0005383;2.19e-23;3!UBERON:0005382;2.19e-23;3!UBERON:0003528;1.18e-17;34!UBERON:0002020;1.18e-17;34!UBERON:0001873;2.95e-16;2!UBERON:0002148;2.07e-15;2!UBERON:0006331;2.07e-15;2!UBERON:0009662;2.07e-15;2!UBERON:0004733;4.19e-15;12!UBERON:0002028;4.19e-15;12!UBERON:0000955;2.80e-14;68!UBERON:0004732;6.22e-14;13!UBERON:0002791;7.03e-14;32!UBERON:0002680;2.86e-13;9!UBERON:0001895;2.86e-13;9!UBERON:0001869;3.06e-13;32!UBERON:0000073;4.33e-12;53!UBERON:0002616;4.33e-12;53!UBERON:0001017;5.35e-12;75!UBERON:0001893;1.46e-11;34!UBERON:0002298;2.08e-11;6!UBERON:0005409;3.87e-11;22!UBERON:0002780;4.31e-11;41!UBERON:0001890;4.31e-11;41!UBERON:0000988;1.38e-10;3!UBERON:0001016;1.56e-10;83!UBERON:0000160;3.21e-10;17!UBERON:0001874;6.90e-09;1!UBERON:0002346;8.70e-09;4!UBERON:0000923;8.70e-09;4!UBERON:0010316;8.70e-09;4!UBERON:0005291;8.70e-09;4!UBERON:0001882;1.47e-08;1!UBERON:0001154;1.47e-08;1!UBERON:0001153;1.47e-08;1!UBERON:0009854;1.47e-08;1!UBERON:0005403;1.47e-08;1!UBERON:0000922;2.09e-08;49!UBERON:0002050;3.44e-07;5!UBERON:0005423;3.44e-07;5!UBERON:0004921;4.98e-07;33!UBERON:0004907;6.17e-07;5!UBERON:0000349;6.84e-07;5!UBERON:0002108;8.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,8.31e-40,9;UBERON:0002308,8.31e-40,9;UBERON:0000369,1.55e-30,4;UBERON:0002435,1.55e-30,4;UBERON:0000204,1.55e-30,4;UBERON:0010082,1.55e-30,4;UBERON:0002420,5.26e-30,9;UBERON:0007245,5.26e-30,9;UBERON:0010009,5.26e-30,9;UBERON:0010011,5.26e-30,9;UBERON:0000454,5.26e-30,9;UBERON:0009663,5.36e-27,7;UBERON:0001049,2.16e-26,56;UBERON:0005068,2.16e-26,56;UBERON:0006241,2.16e-26,56;UBERON:0007135,2.16e-26,56;UBERON:0000073,2.39e-24,53;UBERON:0002616,2.39e-24,53;UBERON:0005383,1.34e-23,3;UBERON:0005382,1.34e-23,3;UBERON:0002346,1.52e-21,86;UBERON:0000955,4.85e-21,68;UBERON:0006238,4.85e-21,68;UBERON:0001017,8.29e-20,81;UBERON:0003528,1.17e-19,34;UBERON:0002020,1.17e-19,34;UBERON:0001016,1.41e-17,89;UBERON:0003075,2.99e-17,82;UBERON:0007284,2.99e-17,82;UBERON:0003076,5.52e-17,15;UBERON:0003057,5.52e-17,15;UBERON:0001873,2.35e-16,2;UBERON:0010122,2.35e-16,2;UBERON:0002148,2.41e-15,2;UBERON:0006331,2.41e-15,2;UBERON:0009662,2.41e-15,2;UBERON:0004733,4.13e-15,12;UBERON:0002028,4.13e-15,12;UBERON:0007277,4.13e-15,12;UBERON:0004732,6.14e-14,13;UBERON:0002791,1.54e-13,32;UBERON:0001869,1.54e-13,32;UBERON:0002680,3.05e-13,9;UBERON:0001895,3.05e-13,9;UBERON:0010092,3.05e-13,9;UBERON:0002780,3.94e-13,41;UBERON:0001890,3.94e-13,41;UBERON:0003080,3.94e-13,41;UBERON:0006240,3.94e-13,41;UBERON:0010371,4.77e-13,104;UBERON:0001893,1.06e-12,34;UBERON:0011216,7.45e-12,223;UBERON:0002298,2.05e-11,6;UBERON:0000988,1.53e-10,3;UBERON:0004121,1.75e-10,171;UBERON:0000924,1.75e-10,171;UBERON:0006601,1.75e-10,171;UBERON:0000160,3.27e-10,17;UBERON:0007023,3.99e-10,114;UBERON:0005409,8.74e-10,25;UBERON:0010314,1.04e-09,132;UBERON:0001874,5.28e-09,1;UBERON:0001882,1.05e-08,1;UBERON:0005403,1.05e-08,1;UBERON:0001154,1.78e-08,1;UBERON:0001153,1.78e-08,1;UBERON:0001045,1.78e-08,1;UBERON:0003056,1.89e-08,61;UBERON:0000349,5.73e-07,5;UBERON:0004907,6.65e-07,5;UBERON:0002108,7.93e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,0.422008249231538,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.463840490809256,1.99613798001194,0,0,0,1.2517279311405,0,0,0,0,0,2.65722415744152,3.13550740426061,3.05163472634166,0.221158519862449,1.47773809476774,0.438770794307945,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,2.4441205797345,0,0,0,0.202203398942031,0,2.10838001152805,0,0,0,0,2.41981432097328,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,3.00210144354895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0.77380195455795,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.250381861413,1.72022758707021,0.221858103073705,0.745156835296601,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,2.33832370607266,0.265729680626726,2.61704630809351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25149840203366,0.991486114072017,0,0,0,0,0,0,1.99110597799025,1.41696576325585,0,0.82046545696302,0.504143392443436,0.553258019713743,0.161475645631851,0,0,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0.206686796501184,0.19024743058172,0.546974809018219,0,0,25.1495879434257,0,0.535701835878287,0.672567444437648,0,0,0,0,0,0.883606528698812,0.657727735628491,0,0,0.235479278551542,2.82808061848803,0,17.3500156896804,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,1.74847648403166,0,0,0,0.392616934229891,0,1.2679671827502,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0.611923411718232,0.872701380680755,2.1161073620616,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.620597975171371,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,0.422008249231538,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.463840490809256,1.99613798001194,0,0,0,1.2517279311405,0,0,0,0,0,2.65722415744152,3.13550740426061,3.05163472634166,0.221158519862449,1.47773809476774,0.438770794307945,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,2.4441205797345,0,0,0,0.202203398942031,0,2.10838001152805,0,0,0,0,2.41981432097328,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,3.00210144354895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0.77380195455795,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.250381861413,1.72022758707021,0.221858103073705,0.745156835296601,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,2.33832370607266,0.265729680626726,2.61704630809351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25149840203366,0.991486114072017,0,0,0,0,0,0,1.99110597799025,1.41696576325585,0,0.82046545696302,0.504143392443436,0.553258019713743,0.161475645631851,0,0,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0.206686796501184,0.19024743058172,0.546974809018219,0,0,25.1495879434257,0,0.535701835878287,0.672567444437648,0,0,0,0,0,0.883606528698812,0.657727735628491,0,0,0.235479278551542,2.82808061848803,0,17.3500156896804,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,1.74847648403166,0,0,0,0.392616934229891,0,1.2679671827502,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0.611923411718232,0.872701380680755,2.1161073620616,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.620597975171371,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@NOS1 | |||
}} | }} |
Latest revision as of 16:26, 16 September 2015
Short description: | p5@NOS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NOS1_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | 0bp_to_ENST00000477584_5end |
EntrezGene: | NOS1 |
HGNC: | 7872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 6.08e-07 | 5 |