FFCP PHASE1:Hg19::chr13:36429874..36429881,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:36429874..36429881,- to FFCP PHASE1:Hg19::chr13:36429874..36429881,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9201 | |EntrezGene=9201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2700 | |HGNC=2700 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001uve.3,uc001uvh.3,uc010abk.2,uc010teh.1_5end | |||
|cluster_id=chr13:36429874..36429881,- | |||
|coexpression_cluster_id=C1706 | |||
|description=CAGE_peak_13_at_DCLK1_5end | |||
|id=chr13:36429874..36429881,- | |||
|ontology_enrichment_celltype=CL:0000047!5.88e-10!8;CL:0002322!1.98e-09!5;CL:0000540!6.41e-07!6;CL:0000031!6.41e-07!6;CL:0000404!6.41e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.52e-16;5!CL:0000047;1.32e-10;2!CL:0000039;6.10e-07;7!CL:0000586;6.10e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.04e-15,5;CL:0000047,9.25e-10,8;CL:0000039,4.93e-07,7;CL:0000586,4.93e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.41e-09;82!UBERON:0009117;5.33e-08;10!UBERON:0005564;5.33e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.37e-45!82;UBERON:0001049!2.52e-44!57;UBERON:0005068!2.52e-44!57;UBERON:0006241!2.52e-44!57;UBERON:0007135!2.52e-44!57;UBERON:0005743!2.53e-44!86;UBERON:0000073!5.13e-42!94;UBERON:0001016!5.13e-42!94;UBERON:0002780!7.10e-37!41;UBERON:0001890!7.10e-37!41;UBERON:0006240!7.10e-37!41;UBERON:0002616!8.38e-36!59;UBERON:0003080!9.45e-36!42;UBERON:0000955!2.85e-33!69;UBERON:0006238!2.85e-33!69;UBERON:0007023!1.41e-32!115;UBERON:0003075!3.02e-30!86;UBERON:0007284!3.02e-30!86;UBERON:0002020!7.52e-30!34;UBERON:0003528!7.52e-30!34;UBERON:0001893!2.60e-29!34;UBERON:0002346!3.00e-28!90;UBERON:0002791!7.25e-28!33;UBERON:0001869!5.95e-27!32;UBERON:0003056!3.77e-24!61;UBERON:0002619!1.17e-20!22;UBERON:0004121!4.16e-20!169;UBERON:0000924!3.05e-19!173;UBERON:0006601!3.05e-19!173;UBERON:0000033!2.87e-18!123;UBERON:0001950!5.62e-18!20;UBERON:0000153!1.00e-17!129;UBERON:0007811!1.00e-17!129;UBERON:0000956!1.31e-17!25;UBERON:0000203!1.31e-17!25;UBERON:0002308!7.73e-15!9;UBERON:0000125!7.73e-15!9;UBERON:0002420!2.80e-14!9;UBERON:0007245!2.80e-14!9;UBERON:0010009!2.80e-14!9;UBERON:0010011!2.80e-14!9;UBERON:0000454!2.80e-14!9;UBERON:0009663!1.64e-11!7;UBERON:0000025!1.23e-10!194;UBERON:0000200!1.24e-10!6;UBERON:0004111!7.02e-10!241;UBERON:0003076!1.09e-09!15;UBERON:0003057!1.09e-09!15;UBERON:0000475!3.76e-09!365;UBERON:0001894!5.22e-09!7;UBERON:0006222!5.22e-09!7;UBERON:0000349!8.48e-09!5;UBERON:0000468!4.07e-08!659;UBERON:0002298!9.37e-08!8;UBERON:0000064!1.30e-07!219;UBERON:0004732!1.47e-07!13;UBERON:0000369!1.75e-07!4;UBERON:0002435!1.75e-07!4;UBERON:0000204!1.75e-07!4;UBERON:0010082!1.75e-07!4;UBERON:0001871!3.20e-07!7;UBERON:0000477!3.22e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.89e-21;41!UBERON:0001890;5.89e-21;41!UBERON:0001869;4.15e-20;32!UBERON:0003528;1.24e-19;34!UBERON:0002020;1.24e-19;34!UBERON:0001893;7.99e-18;34!UBERON:0000073;9.43e-18;53!UBERON:0002616;9.43e-18;53!UBERON:0002791;1.74e-17;32!UBERON:0001950;8.50e-17;20!UBERON:0002619;3.35e-15;22!UBERON:0001870;4.91e-15;3!UBERON:0000955;1.33e-13;68!UBERON:0000125;1.58e-13;9!UBERON:0002308;1.58e-13;9!UBERON:0002298;1.99e-13;6!UBERON:0000956;2.86e-13;25!UBERON:0000203;2.86e-13;25!UBERON:0000200;6.64e-13;6!UBERON:0001017;2.75e-12;75!UBERON:0003296;1.76e-11;4!UBERON:0010133;1.76e-11;4!UBERON:0001016;2.09e-11;83!UBERON:0001894;2.40e-11;7!UBERON:0002148;3.24e-11;2!UBERON:0006331;3.24e-11;2!UBERON:0009662;3.24e-11;2!UBERON:0002702;8.72e-11;2!UBERON:0000007;3.13e-10;2!UBERON:0000473;5.52e-10;8!UBERON:0004732;2.45e-09;13!UBERON:0002021;2.47e-09;5!UBERON:0007023;5.20e-09;114!UBERON:0000988;9.55e-08;3!UBERON:0001896;2.41e-07;3!UBERON:0005290;2.41e-07;3!UBERON:0003135;2.82e-07;11!UBERON:0004733;9.66e-07;12!UBERON:0002028;9.66e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.84e-36,81;UBERON:0001049,1.30e-35,56;UBERON:0005068,1.30e-35,56;UBERON:0006241,1.30e-35,56;UBERON:0007135,1.30e-35,56;UBERON:0001016,1.24e-34,89;UBERON:0000073,2.79e-34,53;UBERON:0002616,2.79e-34,53;UBERON:0002780,6.46e-29,41;UBERON:0001890,6.46e-29,41;UBERON:0003080,6.46e-29,41;UBERON:0006240,6.46e-29,41;UBERON:0000955,5.14e-28,68;UBERON:0006238,5.14e-28,68;UBERON:0003075,2.52e-25,82;UBERON:0007284,2.52e-25,82;UBERON:0002346,6.45e-24,86;UBERON:0003528,8.66e-24,34;UBERON:0002020,8.66e-24,34;UBERON:0001869,1.49e-21,32;UBERON:0003056,7.35e-21,61;UBERON:0001893,3.65e-20,34;UBERON:0010371,6.51e-19,104;UBERON:0007023,9.22e-19,114;UBERON:0002791,2.67e-18,32;UBERON:0001950,1.06e-16,20;UBERON:0004121,2.29e-15,171;UBERON:0000924,2.29e-15,171;UBERON:0006601,2.29e-15,171;UBERON:0002619,4.08e-15,22;UBERON:0001870,1.01e-14,3;UBERON:0010314,7.81e-14,132;UBERON:0000125,1.34e-13,9;UBERON:0002308,1.34e-13,9;UBERON:0002298,2.23e-13,6;UBERON:0000956,3.41e-13,25;UBERON:0000203,3.41e-13,25;UBERON:0000200,7.21e-13,6;UBERON:0011216,2.02e-11,223;UBERON:0003296,2.03e-11,4;UBERON:0010133,2.03e-11,4;UBERON:0001894,2.65e-11,7;UBERON:0006222,2.65e-11,7;UBERON:0002148,4.27e-11,2;UBERON:0006331,4.27e-11,2;UBERON:0009662,4.27e-11,2;UBERON:0002702,1.39e-10,2;UBERON:0000007,3.80e-10,2;UBERON:0000473,5.04e-10,8;UBERON:0004732,2.37e-09,13;UBERON:0002021,2.44e-09,5;UBERON:0000025,6.19e-09,192;UBERON:0003076,5.68e-08,15;UBERON:0003057,5.68e-08,15;UBERON:0000988,1.15e-07,3;UBERON:0001896,2.26e-07,3;UBERON:0005290,2.26e-07,3;UBERON:0010096,2.26e-07,3;UBERON:0003135,2.64e-07,11;UBERON:0004111,6.31e-07,240;UBERON:0009663,8.02e-07,7 | |||
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| ||
|short_description=p13@DCLK1 | |||
}} | }} |
Latest revision as of 05:28, 17 September 2015
Short description: | p13@DCLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DCLK1_5end |
Coexpression cluster: | C1706_pineal_occipital_paracentral_postcentral_alveolar_parietal_medial |
Association with transcript: | 0bp_to_uc001uve.3, uc001uvh.3, uc010abk.2, uc010teh.1_5end |
EntrezGene: | DCLK1 |
HGNC: | 2700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.04e-15 | 5 |
neuronal stem cell | 9.25e-10 | 8 |
germ line cell | 4.93e-07 | 7 |
germ cell | 4.93e-07 | 7 |