FFCP PHASE1:Hg19::chr17:1531663..1531725,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:1531663..1531725,- to FFCP PHASE1:Hg19::chr17:1531663..1531725,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124935 | |EntrezGene=124935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23087 | |HGNC=23087 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_uc002fsu.2_5end | |||
|cluster_id=chr17:1531663..1531725,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_SLC43A2_5end | |||
|id=chr17:1531663..1531725,- | |||
|ontology_enrichment_celltype=CL:0000766!1.94e-29!76;CL:0002057!2.20e-24!42;CL:0002194!1.43e-23!63;CL:0000576!1.43e-23!63;CL:0000040!1.43e-23!63;CL:0000559!1.43e-23!63;CL:0000839!4.00e-23!70;CL:0002009!4.69e-23!65;CL:0000860!4.96e-23!45;CL:0000557!4.98e-23!71;CL:0000738!2.52e-21!140;CL:0000763!3.74e-17!112;CL:0000049!3.74e-17!112;CL:0002087!7.71e-16!119;CL:0002031!5.27e-15!124;CL:0000037!1.63e-14!172;CL:0000566!1.63e-14!172;CL:0000988!2.55e-14!182;CL:0002032!3.72e-13!165;CL:0000837!3.72e-13!165;CL:0000115!6.41e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-22;33!CL:0002057;2.63e-22;33!CL:0000473;2.18e-20;39!CL:0000234;2.18e-20;39!CL:0000576;2.63e-18;48!CL:0000766;4.04e-15;69!CL:0000738;1.58e-07;136!CL:0000094;1.97e-07;8!CL:0002087;4.72e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.86e-36,72;CL:0000473,7.00e-31,48;CL:0000234,7.00e-31,48;CL:0002194,1.41e-29,59;CL:0000576,1.41e-29,59;CL:0000040,1.41e-29,59;CL:0000559,1.41e-29,59;CL:0000860,2.25e-29,42;CL:0002057,2.25e-29,42;CL:0002009,6.59e-29,61;CL:0000557,1.63e-28,67;CL:0000839,3.17e-28,66;CL:0000738,8.58e-27,136;CL:0002087,9.13e-21,115;CL:0002031,1.38e-19,120;CL:0000763,1.00e-17,108;CL:0000049,1.00e-17,108;CL:0000988,3.45e-16,177;CL:0000037,6.74e-16,168;CL:0002032,1.39e-14,161;CL:0000837,1.39e-14,161;CL:0000094,1.94e-07,8;CL:0000115,8.35e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;2.60e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-25!115;UBERON:0002193!5.83e-24!112;UBERON:0002390!2.84e-23!102;UBERON:0003061!2.84e-23!102;UBERON:0002371!4.71e-18!80;UBERON:0002405!7.31e-16!115;UBERON:0001049!1.00e-15!57;UBERON:0005068!1.00e-15!57;UBERON:0006241!1.00e-15!57;UBERON:0007135!1.00e-15!57;UBERON:0001474!5.05e-15!86;UBERON:0003081!2.29e-14!216;UBERON:0001017!1.19e-13!82;UBERON:0005743!1.55e-13!86;UBERON:0002616!6.67e-13!59;UBERON:0002780!1.14e-12!41;UBERON:0001890!1.14e-12!41;UBERON:0006240!1.14e-12!41;UBERON:0003080!2.03e-12!42;UBERON:0000955!2.86e-12!69;UBERON:0006238!2.86e-12!69;UBERON:0001893!2.25e-11!34;UBERON:0004765!2.32e-11!101;UBERON:0001434!2.32e-11!101;UBERON:0003075!2.39e-11!86;UBERON:0007284!2.39e-11!86;UBERON:0002020!4.21e-11!34;UBERON:0003528!4.21e-11!34;UBERON:0002791!7.37e-11!33;UBERON:0001869!8.86e-11!32;UBERON:0000073!2.17e-10!94;UBERON:0001016!2.17e-10!94;UBERON:0002619!9.15e-10!22;UBERON:0002346!2.07e-09!90;UBERON:0001950!5.47e-09!20;UBERON:0000956!1.08e-08!25;UBERON:0000203!1.08e-08!25;UBERON:0000479!1.59e-08!787;UBERON:0000467!1.98e-08!625;UBERON:0000480!2.36e-08!626;UBERON:0003056!5.28e-08!61;UBERON:0000923!1.50e-07!604;UBERON:0005291!1.50e-07!604;UBERON:0006598!1.50e-07!604;UBERON:0002532!1.50e-07!604;UBERON:0002050!1.76e-07!605;UBERON:0005423!1.76e-07!605;UBERON:0000922!3.98e-07!612;UBERON:0000178!6.07e-07!15;UBERON:0000179!6.07e-07!15;UBERON:0000463!6.07e-07!15;UBERON:0000468!8.64e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.05e-10;22!UBERON:0001893;2.09e-10;34!UBERON:0002780;2.96e-10;41!UBERON:0001890;2.96e-10;41!UBERON:0001869;3.07e-10;32!UBERON:0002791;3.32e-10;32!UBERON:0000073;3.78e-10;53!UBERON:0002616;3.78e-10;53!UBERON:0003528;3.93e-10;34!UBERON:0002020;3.93e-10;34!UBERON:0001950;8.42e-10;20!UBERON:0000956;3.74e-09;25!UBERON:0000203;3.74e-09;25!UBERON:0000178;1.22e-08;15!UBERON:0000179;1.22e-08;15!UBERON:0000463;1.22e-08;15!UBERON:0007023;3.35e-08;114 | |||
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| ||
|short_description=p2@SLC43A2 | |||
}} | }} |
Latest revision as of 18:25, 18 September 2015
Short description: | p2@SLC43A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC43A2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -28bp_to_uc002fsu.2_5end |
EntrezGene: | SLC43A2 |
HGNC: | 23087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.86e-36 | 72 |
defensive cell | 7.00e-31 | 48 |
phagocyte | 7.00e-31 | 48 |
monopoietic cell | 1.41e-29 | 59 |
monocyte | 1.41e-29 | 59 |
monoblast | 1.41e-29 | 59 |
promonocyte | 1.41e-29 | 59 |
classical monocyte | 2.25e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.25e-29 | 42 |
macrophage dendritic cell progenitor | 6.59e-29 | 61 |
granulocyte monocyte progenitor cell | 1.63e-28 | 67 |
myeloid lineage restricted progenitor cell | 3.17e-28 | 66 |
leukocyte | 8.58e-27 | 136 |
nongranular leukocyte | 9.13e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 1.38e-19 | 120 |
myeloid cell | 1.00e-17 | 108 |
common myeloid progenitor | 1.00e-17 | 108 |
hematopoietic cell | 3.45e-16 | 177 |
hematopoietic stem cell | 6.74e-16 | 168 |
hematopoietic oligopotent progenitor cell | 1.39e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.39e-14 | 161 |
granulocyte | 1.94e-07 | 8 |
endothelial cell | 8.35e-07 | 36 |