FFCP PHASE1:Hg19::chr2:104517092..104517093,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:104517092..104517093,+ | |||
|coexpression_cluster_id=C545 | |||
|description=CAGE_peak_at_chr2:104517092..104517093,+ | |||
|id=chr2:104517092..104517093,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.63e-22!8;CL:0002605!1.99e-16!3;CL:0000064!2.06e-15!3;CL:0005012!2.06e-15!3;CL:0000067!2.06e-15!3;CL:0002304!2.06e-15!3;CL:0002319!1.15e-13!25;CL:0000540!1.57e-13!6;CL:0000031!1.57e-13!6;CL:0000404!1.57e-13!6;CL:0000133!2.27e-09!59;CL:0000221!1.96e-07!71;CL:0000128!2.83e-07!7;CL:0000126!2.83e-07!7;CL:0000127!2.83e-07!7;CL:0002453!2.83e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;6.64e-39;3!CL:0000047;8.69e-26;2!CL:0002319;3.08e-22;25!CL:0000128;4.39e-17;7!CL:0000126;4.39e-17;7!CL:0000127;4.39e-17;7!CL:0000540;3.02e-09;6!CL:0000404;3.02e-09;6!CL:0000243;2.35e-07;15!CL:0000125;2.35e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.65e-39,3;CL:0000047,4.92e-25,8;CL:0002319,3.29e-22,25;CL:0000128,4.39e-17,7;CL:0000126,4.39e-17,7;CL:0000127,4.39e-17,7;CL:0002453,4.39e-17,7;CL:0000133,2.39e-12,59;CL:0000221,4.93e-10,72;CL:0000540,2.78e-09,6;CL:0000031,2.78e-09,6;CL:0000404,2.78e-09,6;CL:0000243,2.35e-07,15;CL:0000125,2.35e-07,15;CL:0000030,2.35e-07,15;CL:0000339,2.35e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.25e-13;1!CL:0000133;1.41e-09;59!CL:0000031;3.02e-09;6!CL:0000339;2.35e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!1.17e-19!4;UBERON:0001778!2.06e-15!3;UBERON:0001775!2.06e-15!3;UBERON:0002203!3.72e-13!6;UBERON:0001768!3.72e-13!6;UBERON:0002046!4.07e-09!5;UBERON:0004117!4.07e-09!5;UBERON:0007689!4.07e-09!5;UBERON:0007123!4.07e-09!5;UBERON:0003091!4.07e-09!5;UBERON:0000956!8.52e-09!25;UBERON:0000203!8.52e-09!25;UBERON:0001017!9.30e-09!82;UBERON:0000073!2.06e-08!94;UBERON:0001016!2.06e-08!94;UBERON:0005743!3.17e-08!86;UBERON:0003056!1.25e-07!61;UBERON:0007625!3.28e-07!11;UBERON:0002200!3.28e-07!11;UBERON:0006876!3.28e-07!11;UBERON:0004121!4.65e-07!169;UBERON:0000924!8.39e-07!173;UBERON:0006601!8.39e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.86e-23;25!UBERON:0000203;3.86e-23;25!UBERON:0002791;5.38e-18;32!UBERON:0001869;6.54e-18;32!UBERON:0003528;1.86e-16;34!UBERON:0002020;1.86e-16;34!UBERON:0001893;5.70e-15;34!UBERON:0000941;1.25e-13;1!UBERON:0001785;1.25e-13;1!UBERON:0002464;1.25e-13;1!UBERON:0004904;1.25e-13;1!UBERON:0001021;1.25e-13;1!UBERON:0002780;6.58e-12;41!UBERON:0001890;6.58e-12;41!UBERON:0001016;6.69e-10;83!UBERON:0001950;9.20e-10;20!UBERON:0002619;6.22e-09;22!UBERON:0001871;5.86e-08;6!UBERON:0000955;9.85e-08;68!UBERON:0000922;1.55e-07;49!UBERON:0003714;1.87e-07;2!UBERON:0005162;1.87e-07;2!UBERON:0000122;1.87e-07;2!UBERON:0000073;2.60e-07;53!UBERON:0002616;2.60e-07;53!UBERON:0001017;5.45e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.99e-23,25;UBERON:0000203,3.99e-23,25;UBERON:0001016,2.38e-21,89;UBERON:0001017,3.34e-20,81;UBERON:0002791,4.09e-18,32;UBERON:0001869,4.09e-18,32;UBERON:0003528,4.75e-17,34;UBERON:0002020,4.75e-17,34;UBERON:0001893,4.75e-17,34;UBERON:0003056,2.34e-15,61;UBERON:0002780,4.06e-14,41;UBERON:0001890,4.06e-14,41;UBERON:0003080,4.06e-14,41;UBERON:0006240,4.06e-14,41;UBERON:0000941,9.73e-14,1;UBERON:0001785,9.73e-14,1;UBERON:0002464,9.73e-14,1;UBERON:0004904,9.73e-14,1;UBERON:0001021,9.73e-14,1;UBERON:0003902,9.73e-14,1;UBERON:0005425,9.73e-14,1;UBERON:0004121,2.24e-12,171;UBERON:0000924,2.24e-12,171;UBERON:0006601,2.24e-12,171;UBERON:0003075,3.24e-11,82;UBERON:0007284,3.24e-11,82;UBERON:0000073,7.48e-11,53;UBERON:0002616,7.48e-11,53;UBERON:0000955,1.09e-10,68;UBERON:0006238,1.09e-10,68;UBERON:0002346,1.19e-10,86;UBERON:0001049,3.00e-10,56;UBERON:0005068,3.00e-10,56;UBERON:0006241,3.00e-10,56;UBERON:0007135,3.00e-10,56;UBERON:0001950,9.42e-10,20;UBERON:0002619,6.36e-09,22;UBERON:0010371,1.21e-08,104;UBERON:0010314,3.49e-08,132;UBERON:0001871,6.29e-08,6;UBERON:0011216,1.16e-07,223;UBERON:0003714,1.64e-07,2;UBERON:0005162,1.64e-07,2;UBERON:0000122,1.64e-07,2 | |||
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|short_description=p@chr2:104517092..104517093,+ | |||
}} | }} |
Latest revision as of 22:54, 28 July 2015
Short description: | p@chr2:104517092..104517093, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:104517092..104517093, + |
Coexpression cluster: | C545_Astrocyte_Neural_Neurons_parietal_neuroectodermal_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.65e-39 | 3 |
neuronal stem cell | 4.92e-25 | 8 |
neural cell | 3.29e-22 | 25 |
oligodendrocyte | 4.39e-17 | 7 |
macroglial cell | 4.39e-17 | 7 |
astrocyte | 4.39e-17 | 7 |
oligodendrocyte precursor cell | 4.39e-17 | 7 |
neurectodermal cell | 2.39e-12 | 59 |
ectodermal cell | 4.93e-10 | 72 |
neuron | 2.78e-09 | 6 |
neuroblast | 2.78e-09 | 6 |
electrically signaling cell | 2.78e-09 | 6 |
glial cell (sensu Vertebrata) | 2.35e-07 | 15 |
glial cell | 2.35e-07 | 15 |
glioblast | 2.35e-07 | 15 |
glioblast (sensu Vertebrata) | 2.35e-07 | 15 |