FFCP PHASE1:Hg19::chr2:98950728..98950733,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:98950728..98950733,- to FFCP PHASE1:Hg19::chr2:98950728..98950733,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=109bp_to_ENST00000467398_5end | |||
|cluster_id=chr2:98950728..98950733,- | |||
|description=CAGE_peak_1_at_ENST00000467398_5end | |||
|id=chr2:98950728..98950733,- | |||
|ontology_enrichment_celltype=CL:0000055!3.69e-08!180;CL:0002620!6.49e-08!23;CL:0002319!5.76e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.77e-18;3!CL:0000228;5.06e-15;1!CL:0002372;5.06e-15;1!CL:0000128;1.85e-08;7!CL:0000126;1.85e-08;7!CL:0000127;1.85e-08;7!CL:0000047;4.09e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.36e-18,3;CL:0000228,5.42e-15,1;CL:0002372,5.42e-15,1;CL:0000128,1.65e-08,7;CL:0000126,1.65e-08,7;CL:0000127,1.65e-08,7;CL:0002453,1.65e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.93e-19;3!UBERON:0003057;7.93e-19;3!UBERON:0005425;7.63e-15;1!UBERON:0010122;4.53e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.69e-11!57;UBERON:0005068!2.69e-11!57;UBERON:0006241!2.69e-11!57;UBERON:0007135!2.69e-11!57;UBERON:0001017!5.06e-11!82;UBERON:0005743!4.28e-10!86;UBERON:0000073!6.79e-10!94;UBERON:0001016!6.79e-10!94;UBERON:0002616!1.78e-08!59;UBERON:0000955!2.58e-08!69;UBERON:0006238!2.58e-08!69;UBERON:0002780!2.55e-07!41;UBERON:0001890!2.55e-07!41;UBERON:0006240!2.55e-07!41;UBERON:0003080!4.84e-07!42;UBERON:0003075!5.50e-07!86;UBERON:0007284!5.50e-07!86;UBERON:0002298!7.08e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.67e-20;6!UBERON:0002240;7.93e-19;3!UBERON:0005174;7.93e-19;3!UBERON:0001137;7.93e-19;3!UBERON:0001896;1.77e-18;3!UBERON:0005290;1.77e-18;3!UBERON:0004732;1.48e-16;13!UBERON:0000941;7.63e-15;1!UBERON:0001785;7.63e-15;1!UBERON:0002464;7.63e-15;1!UBERON:0004904;7.63e-15;1!UBERON:0001021;7.63e-15;1!UBERON:0007195;1.72e-14;1!UBERON:0004733;1.82e-10;12!UBERON:0002028;1.82e-10;12!UBERON:0001873;4.53e-08;2!UBERON:0003714;4.53e-08;2!UBERON:0005162;4.53e-08;2!UBERON:0000122;4.53e-08;2!UBERON:0002148;6.80e-08;2!UBERON:0006331;6.80e-08;2!UBERON:0009662;6.80e-08;2!UBERON:0000125;7.64e-07;9!UBERON:0002308;7.64e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,6.30e-22,15;UBERON:0003057,6.30e-22,15;UBERON:0002298,4.11e-20,6;UBERON:0002240,6.63e-19,3;UBERON:0005174,6.63e-19,3;UBERON:0001137,6.63e-19,3;UBERON:0001896,2.12e-18,3;UBERON:0005290,2.12e-18,3;UBERON:0010096,2.12e-18,3;UBERON:0004732,1.89e-16,13;UBERON:0000941,7.13e-15,1;UBERON:0001785,7.13e-15,1;UBERON:0002464,7.13e-15,1;UBERON:0004904,7.13e-15,1;UBERON:0001021,7.13e-15,1;UBERON:0003902,7.13e-15,1;UBERON:0005425,7.13e-15,1;UBERON:0007195,2.11e-14,1;UBERON:0001049,4.34e-14,56;UBERON:0005068,4.34e-14,56;UBERON:0006241,4.34e-14,56;UBERON:0007135,4.34e-14,56;UBERON:0001016,2.59e-13,89;UBERON:0001017,5.50e-12,81;UBERON:0003075,5.58e-12,82;UBERON:0007284,5.58e-12,82;UBERON:0002346,2.20e-11,86;UBERON:0004733,2.25e-10,12;UBERON:0002028,2.25e-10,12;UBERON:0007277,2.25e-10,12;UBERON:0010371,2.90e-09,104;UBERON:0000073,1.78e-08,53;UBERON:0002616,1.78e-08,53;UBERON:0003714,4.38e-08,2;UBERON:0005162,4.38e-08,2;UBERON:0000122,4.38e-08,2;UBERON:0001873,4.69e-08,2;UBERON:0010122,4.69e-08,2;UBERON:0002148,9.19e-08,2;UBERON:0006331,9.19e-08,2;UBERON:0009662,9.19e-08,2;UBERON:0010314,4.25e-07,132;UBERON:0000125,8.84e-07,9;UBERON:0002308,8.84e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.61560529038394,0,0,1.14494394852423,1.64249310087461,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.485618833104395,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0,0,0.358779271377724,0,0,0.600182192168805,0.309157587715317,0.257640540045629,0,0.168776332241266,0,0.757301322732344,0,0,1.06502877754984,0.403008392910561,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,7.13184525203592,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0.76228387266739,3.90419561572865,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.767309866440312,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0.551346289938122,0,0,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0.606547444719948,0,0.842516912477962,0,0.731140468893853,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.613612095012929,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0,0,0,1.0342636508924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,1.10929051536852,0.745156835296601,0,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0.189403005275089,0.754703705257725,1.77962244319307,0.228840068396924,0.302461847526478,0.15543720058278,0,0.477890301491107,0.899606224327209,0.310525913752519,0,0.265841714557995,0,0,0,0.813741466409323,0.363697318405119,0.107410557042488,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0.680117776536817,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0,0,0.111231401892069,0,0.157115589916002,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45972175036792,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0.655593431782173,0,0.407955318967927,0.26721740526556,0.275684698604535,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.61560529038394,0,0,1.14494394852423,1.64249310087461,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.485618833104395,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0,0,0.358779271377724,0,0,0.600182192168805,0.309157587715317,0.257640540045629,0,0.168776332241266,0,0.757301322732344,0,0,1.06502877754984,0.403008392910561,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,7.13184525203592,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0.76228387266739,3.90419561572865,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.767309866440312,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0.551346289938122,0,0,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0.606547444719948,0,0.842516912477962,0,0.731140468893853,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.613612095012929,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0,0,0,1.0342636508924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,1.10929051536852,0.745156835296601,0,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0.189403005275089,0.754703705257725,1.77962244319307,0.228840068396924,0.302461847526478,0.15543720058278,0,0.477890301491107,0.899606224327209,0.310525913752519,0,0.265841714557995,0,0,0,0.813741466409323,0.363697318405119,0.107410557042488,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0.680117776536817,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0,0,0.111231401892069,0,0.157115589916002,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45972175036792,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0.655593431782173,0,0.407955318967927,0.26721740526556,0.275684698604535,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000467398 | |||
}} | }} |
Latest revision as of 13:30, 29 July 2015
Short description: | p1@ENST00000467398 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000467398_5end |
Coexpression cluster: | NA |
Association with transcript: | 109bp_to_ENST00000467398_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.36e-18 | 3 |
multinucleate cell | 5.42e-15 | 1 |
myotube | 5.42e-15 | 1 |
oligodendrocyte | 1.65e-08 | 7 |
macroglial cell | 1.65e-08 | 7 |
astrocyte | 1.65e-08 | 7 |
oligodendrocyte precursor cell | 1.65e-08 | 7 |