FFCP PHASE1:Hg19::chr3:58223228..58223282,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:58223228..58223282,+ to FFCP PHASE1:Hg19::chr3:58223228..58223282,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57406 | |EntrezGene=57406 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21398 | |HGNC=21398 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BV23,F5H7L1 | |UniProt=Q9BV23,F5H7L1 | ||
|association_with_transcript=0bp_to_ENST00000295962,ENST00000478253,ENST00000511761,NM_020676,uc003djr.2,uc003djs.3,uc003djt.3_5end | |||
|cluster_id=chr3:58223228..58223282,+ | |||
|description=CAGE_peak_3_at_ABHD6_5end | |||
|id=chr3:58223228..58223282,+ | |||
|ontology_enrichment_celltype=CL:0000557!2.36e-08!71;CL:0002009!4.80e-08!65;CL:0002194!2.75e-07!63;CL:0000576!2.75e-07!63;CL:0000040!2.75e-07!63;CL:0000559!2.75e-07!63;CL:0000839!2.76e-07!70 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.35e-08,67;CL:0002009,1.23e-07,61;CL:0000839,6.59e-07,66;CL:0002194,7.25e-07,59;CL:0000576,7.25e-07,59;CL:0000040,7.25e-07,59;CL:0000559,7.25e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.85e-25!57;UBERON:0005068!5.85e-25!57;UBERON:0006241!5.85e-25!57;UBERON:0007135!5.85e-25!57;UBERON:0002616!3.03e-23!59;UBERON:0005743!1.71e-22!86;UBERON:0000073!3.94e-22!94;UBERON:0001016!3.94e-22!94;UBERON:0001017!7.69e-22!82;UBERON:0000062!6.04e-20!511;UBERON:0003080!9.26e-20!42;UBERON:0000955!1.66e-19!69;UBERON:0006238!1.66e-19!69;UBERON:0002780!2.45e-19!41;UBERON:0001890!2.45e-19!41;UBERON:0006240!2.45e-19!41;UBERON:0002346!5.40e-19!90;UBERON:0007023!9.75e-19!115;UBERON:0000468!2.03e-17!659;UBERON:0002050!3.11e-17!605;UBERON:0005423!3.11e-17!605;UBERON:0003075!3.50e-17!86;UBERON:0007284!3.50e-17!86;UBERON:0000033!5.15e-17!123;UBERON:0000922!5.57e-17!612;UBERON:0000923!5.80e-17!604;UBERON:0005291!5.80e-17!604;UBERON:0006598!5.80e-17!604;UBERON:0002532!5.80e-17!604;UBERON:0000153!6.22e-17!129;UBERON:0007811!6.22e-17!129;UBERON:0003056!7.28e-16!61;UBERON:0000924!7.45e-16!173;UBERON:0006601!7.45e-16!173;UBERON:0000467!1.66e-15!625;UBERON:0001893!3.31e-15!34;UBERON:0000480!3.94e-15!626;UBERON:0002020!6.65e-15!34;UBERON:0003528!6.65e-15!34;UBERON:0002791!1.26e-14!33;UBERON:0004121!2.13e-14!169;UBERON:0001869!5.37e-14!32;UBERON:0002619!3.88e-12!22;UBERON:0000956!1.42e-11!25;UBERON:0000203!1.42e-11!25;UBERON:0001950!6.22e-11!20;UBERON:0002405!1.55e-08!115;UBERON:0000477!2.69e-08!286;UBERON:0004111!1.30e-07!241;UBERON:0000479!2.36e-07!787;UBERON:0002371!5.10e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.92e-15;53!UBERON:0002616;7.92e-15;53!UBERON:0002780;1.12e-14;41!UBERON:0001890;1.12e-14;41!UBERON:0001893;2.96e-13;34!UBERON:0003528;5.60e-13;34!UBERON:0002020;5.60e-13;34!UBERON:0001869;6.69e-13;32!UBERON:0002791;8.02e-13;32!UBERON:0002619;2.02e-12;22!UBERON:0000956;3.15e-12;25!UBERON:0000203;3.15e-12;25!UBERON:0001950;4.01e-11;20!UBERON:0001017;4.00e-09;75!UBERON:0000955;2.05e-08;68!UBERON:0001016;4.03e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.28e-25,56;UBERON:0005068,1.28e-25,56;UBERON:0006241,1.28e-25,56;UBERON:0007135,1.28e-25,56;UBERON:0000073,3.06e-24,53;UBERON:0002616,3.06e-24,53;UBERON:0002346,2.43e-21,86;UBERON:0001017,2.75e-21,81;UBERON:0001016,6.69e-21,89;UBERON:0002780,5.65e-20,41;UBERON:0001890,5.65e-20,41;UBERON:0003080,5.65e-20,41;UBERON:0006240,5.65e-20,41;UBERON:0003075,2.15e-19,82;UBERON:0007284,2.15e-19,82;UBERON:0000955,3.95e-19,68;UBERON:0006238,3.95e-19,68;UBERON:0007023,2.29e-18,114;UBERON:0003056,1.50e-16,61;UBERON:0010371,7.03e-16,104;UBERON:0004121,7.45e-16,171;UBERON:0000924,7.45e-16,171;UBERON:0006601,7.45e-16,171;UBERON:0002050,1.01e-15,564;UBERON:0001893,1.07e-15,34;UBERON:0003528,2.21e-15,34;UBERON:0002020,2.21e-15,34;UBERON:0000922,2.51e-15,592;UBERON:0005423,3.13e-15,581;UBERON:0000923,8.04e-15,560;UBERON:0010316,8.04e-15,560;UBERON:0005291,8.04e-15,560;UBERON:0006598,8.04e-15,560;UBERON:0010317,8.04e-15,560;UBERON:0002532,8.04e-15,560;UBERON:0001869,1.92e-14,32;UBERON:0002791,1.99e-14,32;UBERON:0011216,7.08e-14,223;UBERON:0002619,1.62e-12,22;UBERON:0010314,6.01e-12,132;UBERON:0000956,6.20e-12,25;UBERON:0000203,6.20e-12,25;UBERON:0001950,2.87e-11,20;UBERON:0002405,1.56e-07,93;UBERON:0004111,2.51e-07,240;UBERON:0003076,7.05e-07,15;UBERON:0003057,7.05e-07,15 | |||
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| ||
|short_description=p3@ABHD6 | |||
}} | }} |
Latest revision as of 05:19, 19 September 2015
Short description: | p3@ABHD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABHD6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000295962, ENST00000478253, ENST00000511761, NM_020676, uc003djr.2, uc003djs.3, uc003djt.3_5end |
EntrezGene: | ABHD6 |
HGNC: | 21398 |
UniProt: | Q9BV23F5H7L1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.35e-08 | 67 |
macrophage dendritic cell progenitor | 1.23e-07 | 61 |
myeloid lineage restricted progenitor cell | 6.59e-07 | 66 |
monopoietic cell | 7.25e-07 | 59 |
monocyte | 7.25e-07 | 59 |
monoblast | 7.25e-07 | 59 |
promonocyte | 7.25e-07 | 59 |