FFCP PHASE1:Hg19::chr7:29519357..29519387,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:29519357..29519387,+ to FFCP PHASE1:Hg19::chr7:29519357..29519387,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000412711_5end | |||
|cluster_id=chr7:29519357..29519387,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_3_at_CHN2_5end | |||
|id=chr7:29519357..29519387,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.28e-12;3!UBERON:0006601;1.03e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.39e-57!57;UBERON:0005068!3.39e-57!57;UBERON:0006241!3.39e-57!57;UBERON:0007135!3.39e-57!57;UBERON:0007023!8.53e-55!115;UBERON:0002780!7.03e-52!41;UBERON:0001890!7.03e-52!41;UBERON:0006240!7.03e-52!41;UBERON:0003080!2.09e-50!42;UBERON:0002616!5.51e-47!59;UBERON:0001017!1.08e-45!82;UBERON:0001893!1.63e-45!34;UBERON:0005743!3.11e-45!86;UBERON:0002020!3.30e-45!34;UBERON:0003528!3.30e-45!34;UBERON:0000955!1.45e-44!69;UBERON:0006238!1.45e-44!69;UBERON:0002791!1.29e-43!33;UBERON:0000073!1.63e-43!94;UBERON:0001016!1.63e-43!94;UBERON:0003075!1.98e-43!86;UBERON:0007284!1.98e-43!86;UBERON:0001869!4.07e-42!32;UBERON:0002346!7.37e-41!90;UBERON:0003056!3.11e-40!61;UBERON:0002619!1.97e-35!22;UBERON:0001950!5.21e-32!20;UBERON:0000956!1.43e-30!25;UBERON:0000203!1.43e-30!25;UBERON:0000033!5.03e-27!123;UBERON:0000153!4.06e-25!129;UBERON:0007811!4.06e-25!129;UBERON:0000025!8.04e-23!194;UBERON:0004121!1.01e-21!169;UBERON:0000924!7.11e-21!173;UBERON:0006601!7.11e-21!173;UBERON:0004111!1.47e-18!241;UBERON:0002308!3.48e-16!9;UBERON:0000125!3.48e-16!9;UBERON:0000477!1.07e-15!286;UBERON:0000481!1.06e-13!347;UBERON:0000483!2.89e-13!309;UBERON:0000062!5.51e-13!511;UBERON:0000119!5.70e-13!312;UBERON:0002420!6.24e-13!9;UBERON:0007245!6.24e-13!9;UBERON:0010009!6.24e-13!9;UBERON:0010011!6.24e-13!9;UBERON:0000454!6.24e-13!9;UBERON:0009663!6.92e-13!7;UBERON:0000200!9.45e-13!6;UBERON:0000475!1.14e-12!365;UBERON:0001871!2.05e-12!7;UBERON:0000064!5.69e-11!219;UBERON:0001872!1.57e-10!5;UBERON:0000922!1.01e-09!612;UBERON:0000467!1.44e-09!625;UBERON:0000480!1.63e-09!626;UBERON:0000923!1.67e-09!604;UBERON:0005291!1.67e-09!604;UBERON:0006598!1.67e-09!604;UBERON:0002532!1.67e-09!604;UBERON:0002050!1.89e-09!605;UBERON:0005423!1.89e-09!605;UBERON:0003076!6.57e-09!15;UBERON:0003057!6.57e-09!15;UBERON:0002298!2.49e-08!8;UBERON:0000369!6.85e-08!4;UBERON:0002435!6.85e-08!4;UBERON:0000204!6.85e-08!4;UBERON:0010082!6.85e-08!4;UBERON:0000468!7.87e-08!659;UBERON:0001894!9.01e-08!7;UBERON:0006222!9.01e-08!7;UBERON:0002771!2.86e-07!3;UBERON:0002021!3.24e-07!5;UBERON:0000349!6.61e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.26e-45;22!UBERON:0001950;7.89e-44;20!UBERON:0001893;3.50e-42;34!UBERON:0001869;7.61e-41;32!UBERON:0002780;9.47e-40;41!UBERON:0001890;9.47e-40;41!UBERON:0000956;2.86e-39;25!UBERON:0000203;2.86e-39;25!UBERON:0002791;2.71e-37;32!UBERON:0003528;6.48e-37;34!UBERON:0002020;6.48e-37;34!UBERON:0000073;3.82e-27;53!UBERON:0002616;3.82e-27;53!UBERON:0002784;4.12e-17;4!UBERON:0001017;7.32e-17;75!UBERON:0000955;1.21e-16;68!UBERON:0000200;4.20e-16;6!UBERON:0001016;3.52e-15;83!UBERON:0001871;7.68e-14;6!UBERON:0001872;5.19e-13;5!UBERON:0002021;9.40e-13;5!UBERON:0007023;7.46e-11;114!UBERON:0001905;7.19e-10;2!UBERON:0002757;7.19e-10;2!UBERON:0010134;7.19e-10;2!UBERON:0005408;7.19e-10;2!UBERON:0001899;7.19e-10;2!UBERON:0001894;8.44e-10;7!UBERON:0001897;5.68e-09;2!UBERON:0010225;5.68e-09;2!UBERON:0002771;1.21e-08;2!UBERON:0001875;1.21e-08;2!UBERON:0005162;1.21e-08;2!UBERON:0000122;1.21e-08;2!UBERON:0006514;1.21e-08;2!UBERON:0002108;2.91e-08;4!UBERON:0000349;1.87e-07;5!UBERON:0002420;5.59e-07;9!UBERON:0000125;5.59e-07;9!UBERON:0007245;5.59e-07;9!UBERON:0002308;5.59e-07;9!UBERON:0010009;5.59e-07;9!UBERON:0010011;5.59e-07;9!UBERON:0000454;5.59e-07;9!UBERON:0011216;9.74e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,6.41e-57,41;UBERON:0001890,6.41e-57,41;UBERON:0003080,6.41e-57,41;UBERON:0006240,6.41e-57,41;UBERON:0000073,5.87e-50,53;UBERON:0002616,5.87e-50,53;UBERON:0001893,2.57e-48,34;UBERON:0001049,5.76e-47,56;UBERON:0005068,5.76e-47,56;UBERON:0006241,5.76e-47,56;UBERON:0007135,5.76e-47,56;UBERON:0001869,7.40e-47,32;UBERON:0003056,2.85e-46,61;UBERON:0002619,2.94e-45,22;UBERON:0001950,3.72e-44,20;UBERON:0003528,1.31e-43,34;UBERON:0002020,1.31e-43,34;UBERON:0000955,3.86e-43,68;UBERON:0006238,3.86e-43,68;UBERON:0002791,3.38e-42,32;UBERON:0007023,8.41e-42,114;UBERON:0000956,1.47e-39,25;UBERON:0000203,1.47e-39,25;UBERON:0001017,4.68e-38,81;UBERON:0003075,7.63e-38,82;UBERON:0007284,7.63e-38,82;UBERON:0001016,4.64e-36,89;UBERON:0002346,9.26e-36,86;UBERON:0010371,2.37e-28,104;UBERON:0011216,7.27e-25,223;UBERON:0010314,1.65e-22,132;UBERON:0002784,4.15e-17,4;UBERON:0004121,7.74e-17,171;UBERON:0000924,7.74e-17,171;UBERON:0006601,7.74e-17,171;UBERON:0000200,1.22e-16,6;UBERON:0000025,1.18e-15,192;UBERON:0001871,3.55e-14,6;UBERON:0004111,5.59e-13,240;UBERON:0002021,7.84e-13,5;UBERON:0001872,1.10e-12,5;UBERON:0001905,7.22e-10,2;UBERON:0002757,7.22e-10,2;UBERON:0010134,7.22e-10,2;UBERON:0005408,7.22e-10,2;UBERON:0001899,7.22e-10,2;UBERON:0001894,8.47e-10,7;UBERON:0006222,8.47e-10,7;UBERON:0000483,3.65e-09,306;UBERON:0000119,5.37e-09,309;UBERON:0002771,5.47e-09,2;UBERON:0001897,5.70e-09,2;UBERON:0010225,5.70e-09,2;UBERON:0005162,1.53e-08,2;UBERON:0000122,1.53e-08,2;UBERON:0001875,2.74e-08,2;UBERON:0006514,2.74e-08,2;UBERON:0002108,2.85e-08,4;UBERON:0000349,1.67e-07,5;UBERON:0000922,6.46e-07,592;UBERON:0002420,7.39e-07,9;UBERON:0007245,7.39e-07,9;UBERON:0010009,7.39e-07,9;UBERON:0010011,7.39e-07,9;UBERON:0000454,7.39e-07,9 | |||
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| ||
|short_description=p3@CHN2 | |||
}} | }} |
Latest revision as of 04:19, 18 September 2015
Short description: | p3@CHN2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHN2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 29bp_to_ENST00000412711_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data