FFCP PHASE1:Hg19::chr9:140088882..140088898,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:140088882..140088898,- to FFCP PHASE1:Hg19::chr9:140088882..140088898,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:140088882..140088898,- | |||
|coexpression_cluster_id=C789 | |||
|description=CAGE_peak_at_chr9:140088882..140088898,- | |||
|id=chr9:140088882..140088898,- | |||
|ontology_enrichment_celltype=CL:0002586!3.34e-14!3;CL:0000149!9.36e-11!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;4.48e-44;3!CL:0000149;2.89e-33;4!CL:0000147;5.69e-10;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.49e-44,3;CL:0000149,2.89e-33,4;CL:0000147,5.70e-10,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.91e-20;3!UBERON:0005425;2.06e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.97e-66!86;UBERON:0000073!9.58e-63!94;UBERON:0001016!9.58e-63!94;UBERON:0001049!1.83e-60!57;UBERON:0005068!1.83e-60!57;UBERON:0006241!1.83e-60!57;UBERON:0007135!1.83e-60!57;UBERON:0003075!1.46e-56!86;UBERON:0007284!1.46e-56!86;UBERON:0000955!6.74e-55!69;UBERON:0006238!6.74e-55!69;UBERON:0001017!1.02e-54!82;UBERON:0002346!1.05e-53!90;UBERON:0002616!2.29e-50!59;UBERON:0001893!1.71e-46!34;UBERON:0002780!3.50e-46!41;UBERON:0001890!3.50e-46!41;UBERON:0006240!3.50e-46!41;UBERON:0002020!3.79e-46!34;UBERON:0003528!3.79e-46!34;UBERON:0007023!1.13e-45!115;UBERON:0003080!5.66e-45!42;UBERON:0002791!1.95e-43!33;UBERON:0003056!1.92e-42!61;UBERON:0001869!7.61e-40!32;UBERON:0000033!2.97e-39!123;UBERON:0000153!4.65e-37!129;UBERON:0007811!4.65e-37!129;UBERON:0002619!1.37e-36!22;UBERON:0001950!4.25e-35!20;UBERON:0004121!2.67e-33!169;UBERON:0000924!2.46e-32!173;UBERON:0006601!2.46e-32!173;UBERON:0000956!5.92e-32!25;UBERON:0000203!5.92e-32!25;UBERON:0000200!3.88e-24!6;UBERON:0002298!5.91e-18!8;UBERON:0003076!5.75e-16!15;UBERON:0003057!5.75e-16!15;UBERON:0002308!1.32e-15!9;UBERON:0000125!1.32e-15!9;UBERON:0000025!5.26e-15!194;UBERON:0000966!1.16e-14!5;UBERON:0005388!1.16e-14!5;UBERON:0001802!1.16e-14!5;UBERON:0004732!2.08e-14!13;UBERON:0001781!3.34e-14!3;UBERON:0001782!3.34e-14!3;UBERON:0005424!3.34e-14!3;UBERON:0006331!7.39e-13!3;UBERON:0002771!8.02e-13!3;UBERON:0001871!1.25e-12!7;UBERON:0000988!1.59e-12!3;UBERON:0000064!1.32e-11!219;UBERON:0004733!1.72e-11!12;UBERON:0002028!1.72e-11!12;UBERON:0007277!1.72e-11!12;UBERON:0002420!4.25e-11!9;UBERON:0007245!4.25e-11!9;UBERON:0010009!4.25e-11!9;UBERON:0010011!4.25e-11!9;UBERON:0000454!4.25e-11!9;UBERON:0000475!1.06e-10!365;UBERON:0004111!1.26e-10!241;UBERON:0000483!1.32e-10!309;UBERON:0000119!2.00e-10!312;UBERON:0005162!8.48e-10!2;UBERON:0000122!8.48e-10!2;UBERON:0009663!1.44e-09!7;UBERON:0001870!1.97e-09!2;UBERON:0002148!9.33e-09!2;UBERON:0009662!9.33e-09!2;UBERON:0000477!1.39e-08!286;UBERON:0001872!5.40e-08!5;UBERON:0002021!5.94e-08!5;UBERON:0000349!9.12e-08!5;UBERON:0000062!2.24e-07!511;UBERON:0002680!3.48e-07!9;UBERON:0001895!3.48e-07!9;UBERON:0010092!3.48e-07!9;UBERON:0002104!6.81e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.57e-46;5!UBERON:0005388;1.57e-46;5!UBERON:0001802;1.57e-46;5!UBERON:0001781;4.48e-44;3!UBERON:0001782;4.48e-44;3!UBERON:0005162;5.24e-29;2!UBERON:0000122;5.24e-29;2!UBERON:0002104;3.55e-17;21!UBERON:0002038;9.98e-16;1!UBERON:0009661;9.98e-16;1!UBERON:0002950;9.98e-16;1!UBERON:0001891;9.98e-16;1!UBERON:0002336;2.06e-15;1!UBERON:0003112;2.06e-15;1!UBERON:0000941;2.06e-15;1!UBERON:0001785;2.06e-15;1!UBERON:0002464;2.06e-15;1!UBERON:0004904;2.06e-15;1!UBERON:0011215;2.06e-15;1!UBERON:0001018;2.06e-15;1!UBERON:0011158;2.06e-15;1!UBERON:0001021;2.06e-15;1!UBERON:0002473;2.06e-15;1!UBERON:0005340;2.06e-15;1!UBERON:0003544;2.06e-15;1!UBERON:0005970;2.06e-15;1!UBERON:0002316;2.06e-15;1!UBERON:0001020;2.06e-15;1!UBERON:0003128;2.06e-15;1!UBERON:0002437;2.06e-15;1!UBERON:0001703;2.06e-15;1!UBERON:0002241;2.06e-15;1!UBERON:0001032;4.91e-15;24!UBERON:0004456;4.91e-15;24!UBERON:0007625;1.56e-12;11!UBERON:0000019;1.57e-12;19!UBERON:0000047;1.57e-12;19!UBERON:0004088;1.57e-12;19!UBERON:0010230;1.57e-12;19!UBERON:0000970;6.44e-12;20!UBERON:0001456;2.31e-11;21!UBERON:0000020;2.14e-10;23!UBERON:0001897;2.31e-08;2!UBERON:0003714;2.31e-08;2!UBERON:0010225;2.31e-08;2!UBERON:0002780;1.07e-07;41!UBERON:0001890;1.07e-07;41!UBERON:0000033;7.44e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.01e-59,6;UBERON:0005388,1.01e-59,6;UBERON:0001802,1.01e-59,6;UBERON:0001781,1.22e-57,4;UBERON:0001782,4.49e-44,3;UBERON:0005424,4.49e-44,3;UBERON:0005162,3.41e-29,2;UBERON:0000122,3.41e-29,2;UBERON:0003056,5.22e-22,61;UBERON:0003075,1.26e-19,82;UBERON:0007284,1.26e-19,82;UBERON:0002346,1.12e-18,86;UBERON:0000019,4.95e-18,20;UBERON:0000047,4.95e-18,20;UBERON:0010312,4.95e-18,20;UBERON:0004088,4.95e-18,20;UBERON:0010230,4.95e-18,20;UBERON:0003072,4.95e-18,20;UBERON:0004128,4.95e-18,20;UBERON:0003071,4.95e-18,20;UBERON:0000970,3.55e-17,21;UBERON:0002104,3.55e-17,21;UBERON:0001456,2.13e-16,22;UBERON:0002038,9.99e-16,1;UBERON:0009661,9.99e-16,1;UBERON:0002950,9.99e-16,1;UBERON:0001891,9.99e-16,1;UBERON:0009616,9.99e-16,1;UBERON:0010286,9.99e-16,1;UBERON:0002336,1.34e-15,1;UBERON:0011215,1.34e-15,1;UBERON:0001018,1.34e-15,1;UBERON:0002473,1.34e-15,1;UBERON:0005340,1.34e-15,1;UBERON:0003544,1.34e-15,1;UBERON:0005970,1.34e-15,1;UBERON:0002316,1.34e-15,1;UBERON:0001020,1.34e-15,1;UBERON:0002437,1.34e-15,1;UBERON:0000941,2.06e-15,1;UBERON:0001785,2.06e-15,1;UBERON:0002464,2.06e-15,1;UBERON:0004904,2.06e-15,1;UBERON:0001021,2.06e-15,1;UBERON:0003902,2.06e-15,1;UBERON:0005425,2.06e-15,1;UBERON:0003112,2.75e-15,1;UBERON:0011158,2.75e-15,1;UBERON:0003128,2.75e-15,1;UBERON:0001703,2.75e-15,1;UBERON:0002241,2.75e-15,1;UBERON:0004761,2.75e-15,1;UBERON:0009617,2.75e-15,1;UBERON:0010371,2.78e-15,104;UBERON:0000020,4.91e-15,24;UBERON:0001032,4.91e-15,24;UBERON:0004456,4.91e-15,24;UBERON:0010314,3.59e-14,132;UBERON:0007625,1.56e-12,11;UBERON:0005085,1.22e-11,31;UBERON:0007023,2.23e-11,114;UBERON:0004121,1.49e-10,171;UBERON:0000924,1.49e-10,171;UBERON:0006601,1.49e-10,171;UBERON:0001016,3.93e-09,89;UBERON:0000033,5.89e-09,56;UBERON:0001049,1.16e-08,56;UBERON:0005068,1.16e-08,56;UBERON:0006241,1.16e-08,56;UBERON:0007135,1.16e-08,56;UBERON:0002780,1.93e-08,41;UBERON:0001890,1.93e-08,41;UBERON:0003080,1.93e-08,41;UBERON:0006240,1.93e-08,41;UBERON:0003714,2.31e-08,2;UBERON:0001897,2.48e-08,2;UBERON:0010225,2.48e-08,2;UBERON:0005253,2.67e-08,2;UBERON:0000153,4.66e-08,62;UBERON:0007811,4.66e-08,62;UBERON:0001017,7.46e-08,81;UBERON:0001444,2.41e-07,49;UBERON:0000955,4.98e-07,68;UBERON:0006238,4.98e-07,68;UBERON:0001893,8.94e-07,34 | |||
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|short_description=p@chr9:140088882..140088898,- | |||
}} | }} |
Latest revision as of 00:39, 1 August 2015
Short description: | p@chr9:140088882..140088898, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:140088882..140088898, - |
Coexpression cluster: | C789_retina_Retinal_medulla_stomach_lung_eye_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.49e-44 | 3 |
visual pigment cell | 2.89e-33 | 4 |
pigment cell | 5.70e-10 | 14 |