FFCP PHASE1:Mm9::chr1:134288235..134288259,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:134288235..134288259,- to FFCP PHASE1:Mm9::chr1:134288235..134288259,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68875 | |EntrezGene=68875 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80W04 | |UniProt=Q80W04 | ||
|association_with_transcript=-377bp_to_ENSMUST00000045473,NM_178874,uc007cot.1_5end | |||
|cluster_id=chr1:134288235..134288259,- | |||
|description=CAGE_peak_5_at_Tmcc2_5end | |||
|id=chr1:134288235..134288259,- | |||
|ontology_enrichment_celltype=CL:0000540!8.44e-18!33;CL:0000047!8.44e-18!33;CL:0000031!8.44e-18!33;CL:0000404!8.44e-18!33;CL:0000221!2.12e-16!44;CL:0000133!2.12e-16!44;CL:0000393!3.20e-16!39;CL:0000211!3.20e-16!39;CL:0002319!4.01e-16!43;CL:0000055!2.32e-14!50;CL:0000117!2.49e-14!23;CL:0000337!2.49e-14!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.75e-28,33;CL:0000047,1.75e-28,33;CL:0000031,1.75e-28,33;CL:0000404,1.75e-28,33;CL:0000117,2.69e-27,23;CL:0000337,2.69e-27,23;CL:0000393,8.55e-23,39;CL:0000211,8.55e-23,39;CL:0002319,6.76e-20,43;CL:0000221,2.96e-19,44;CL:0000133,2.96e-19,44;CL:0002321,3.47e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.72e-32!75;UBERON:0001016!1.72e-32!75;UBERON:0001017!2.23e-32!73;UBERON:0005743!2.23e-32!73;UBERON:0004121!1.17e-27!102;UBERON:0000924!1.17e-27!102;UBERON:0006601!1.17e-27!102;UBERON:0001049!1.06e-23!52;UBERON:0005068!1.06e-23!52;UBERON:0006241!1.06e-23!52;UBERON:0007135!1.06e-23!52;UBERON:0002346!3.46e-23!71;UBERON:0003075!3.46e-23!71;UBERON:0007284!3.46e-23!71;UBERON:0000955!2.09e-22!50;UBERON:0006238!2.09e-22!50;UBERON:0002616!1.07e-21!49;UBERON:0000033!1.59e-21!63;UBERON:0002020!2.97e-17!34;UBERON:0003080!6.94e-17!40;UBERON:0003056!1.59e-16!49;UBERON:0002780!3.45e-16!39;UBERON:0001890!3.45e-16!39;UBERON:0006240!3.45e-16!39;UBERON:0002791!5.28e-14!29;UBERON:0003528!5.28e-14!29;UBERON:0001893!5.28e-14!29;UBERON:0000025!1.66e-09!114;UBERON:0000956!2.86e-09!21;UBERON:0001869!2.86e-09!21;UBERON:0000203!2.86e-09!21;UBERON:0004111!5.47e-09!122;UBERON:0007811!6.41e-09!86;UBERON:0000153!2.65e-08!94;UBERON:0003076!1.74e-07!12;UBERON:0003057!1.74e-07!12;UBERON:0002619!3.00e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.03e-51,73;UBERON:0001016,3.33e-49,75;UBERON:0000073,2.41e-44,54;UBERON:0001049,3.08e-41,52;UBERON:0005068,3.08e-41,52;UBERON:0006241,3.08e-41,52;UBERON:0007135,3.08e-41,52;UBERON:0002346,2.10e-36,64;UBERON:0003075,2.10e-36,64;UBERON:0007284,2.10e-36,64;UBERON:0004121,8.26e-36,95;UBERON:0000924,8.26e-36,95;UBERON:0006601,8.26e-36,95;UBERON:0000955,5.54e-34,47;UBERON:0006238,5.54e-34,47;UBERON:0002616,1.49e-32,46;UBERON:0002020,7.55e-32,34;UBERON:0010371,2.39e-30,73;UBERON:0003080,5.98e-29,40;UBERON:0002780,1.67e-27,39;UBERON:0001890,1.67e-27,39;UBERON:0006240,1.67e-27,39;UBERON:0003528,6.66e-25,29;UBERON:0002791,6.66e-25,29;UBERON:0001893,6.66e-25,29;UBERON:0003056,6.65e-22,49;UBERON:0010314,1.75e-21,92;UBERON:0000956,6.43e-15,21;UBERON:0001869,6.43e-15,21;UBERON:0000203,6.43e-15,21;UBERON:0000025,5.45e-14,114;UBERON:0004111,2.67e-12,122;UBERON:0003076,3.39e-12,12;UBERON:0003057,3.39e-12,12;UBERON:0002420,1.24e-11,8;UBERON:0007245,1.24e-11,8;UBERON:0010009,1.24e-11,8;UBERON:0010011,1.24e-11,8;UBERON:0000454,1.24e-11,8;UBERON:0011216,1.50e-11,194;UBERON:0002619,9.82e-11,17;UBERON:0002240,8.78e-10,6;UBERON:0005174,8.78e-10,6;UBERON:0001137,8.78e-10,6;UBERON:0002021,9.19e-10,10;UBERON:0000411,9.19e-10,10;UBERON:0001950,9.19e-10,10;UBERON:0001948,2.96e-08,5;UBERON:0002315,2.96e-08,5;UBERON:0002950,1.20e-07,4;UBERON:0001891,1.20e-07,4;UBERON:0009616,1.20e-07,4;UBERON:0010286,1.20e-07,4;UBERON:0000369,4.34e-07,5;UBERON:0002435,4.34e-07,5;UBERON:0000204,4.34e-07,5;UBERON:0010082,4.34e-07,5;UBERON:0000483,8.39e-07,174 | |||
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| ||
|short_description=p5@Tmcc2 | |||
}} | }} |
Latest revision as of 09:07, 26 September 2015
Short description: | p5@Tmcc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tmcc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -377bp_to_ENSMUST00000045473, NM_178874, uc007cot.1_5end |
EntrezGene: | Tmcc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.75e-28 | 33 |
neuronal stem cell | 1.75e-28 | 33 |
neuroblast | 1.75e-28 | 33 |
electrically signaling cell | 1.75e-28 | 33 |
CNS neuron (sensu Vertebrata) | 2.69e-27 | 23 |
neuroblast (sensu Vertebrata) | 2.69e-27 | 23 |
electrically responsive cell | 8.55e-23 | 39 |
electrically active cell | 8.55e-23 | 39 |
neural cell | 6.76e-20 | 43 |
ectodermal cell | 2.96e-19 | 44 |
neurectodermal cell | 2.96e-19 | 44 |
embryonic cell | 3.47e-09 | 70 |