FFCP PHASE1:Mm9::chr13:100195373..100195395,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100195373..100195395,-|id=chr13:100195373..100195395,-|ontology_enrichment_celltype=CL:0000540!1.97e-20!33;CL:0000047!1.97e-20!33;CL:0000031!1.97e-20!33;CL:0000404!1.97e-20!33;CL:0000117!4.24e-17!23;CL:0000337!4.24e-17!23;CL:0000393!1.15e-16!39;CL:0000211!1.15e-16!39;CL:0000221!4.79e-16!44;CL:0000133!4.79e-16!44;CL:0002319!8.18e-16!43;CL:0000055!9.38e-13!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.23e-36,23;CL:0000337,8.23e-36,23;CL:0000540,2.29e-32,33;CL:0000047,2.29e-32,33;CL:0000031,2.29e-32,33;CL:0000404,2.29e-32,33;CL:0000393,2.87e-26,39;CL:0000211,2.87e-26,39;CL:0002319,3.73e-23,43;CL:0000221,1.83e-22,44;CL:0000133,1.83e-22,44;CL:0002321,1.57e-11,70;CL:0002609,1.34e-07,6;CL:0000723,2.30e-07,91;CL:0000048,2.30e-07,91;CL:0002612,3.79e-07,3;CL:0002613,5.65e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.60e-34!75;UBERON:0001016!9.60e-34!75;UBERON:0001017!1.00e-32!73;UBERON:0005743!1.00e-32!73;UBERON:0004121!2.00e-29!102;UBERON:0000924!2.00e-29!102;UBERON:0006601!2.00e-29!102;UBERON:0002346!8.86e-27!71;UBERON:0003075!8.86e-27!71;UBERON:0007284!8.86e-27!71;UBERON:0001049!1.46e-24!52;UBERON:0005068!1.46e-24!52;UBERON:0006241!1.46e-24!52;UBERON:0007135!1.46e-24!52;UBERON:0000033!2.61e-23!63;UBERON:0000955!8.70e-23!50;UBERON:0006238!8.70e-23!50;UBERON:0002616!3.28e-22!49;UBERON:0003056!8.66e-22!49;UBERON:0002020!1.73e-20!34;UBERON:0003080!2.77e-20!40;UBERON:0002780!1.06e-19!39;UBERON:0001890!1.06e-19!39;UBERON:0006240!1.06e-19!39;UBERON:0002791!9.48e-17!29;UBERON:0003528!9.48e-17!29;UBERON:0001893!9.48e-17!29;UBERON:0000956!1.58e-11!21;UBERON:0001869!1.58e-11!21;UBERON:0000203!1.58e-11!21;UBERON:0007811!5.89e-11!86;UBERON:0000153!4.54e-10!94;UBERON:0002619!3.70e-09!17;UBERON:0002021!1.08e-08!10;UBERON:0000411!1.08e-08!10;UBERON:0001950!1.08e-08!10;UBERON:0000025!4.70e-07!114;UBERON:0004111!6.07e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-42,73;UBERON:0002020,9.87e-42,34;UBERON:0001016,2.95e-41,75;UBERON:0000073,1.27e-37,54;UBERON:0001049,1.88e-34,52;UBERON:0005068,1.88e-34,52;UBERON:0006241,1.88e-34,52;UBERON:0007135,1.88e-34,52;UBERON:0003528,5.76e-33,29;UBERON:0002791,5.76e-33,29;UBERON:0001893,5.76e-33,29;UBERON:0004121,7.14e-32,95;UBERON:0000924,7.14e-32,95;UBERON:0006601,7.14e-32,95;UBERON:0002346,1.29e-31,64;UBERON:0003075,1.29e-31,64;UBERON:0007284,1.29e-31,64;UBERON:0010371,1.55e-26,73;UBERON:0000955,1.64e-26,47;UBERON:0006238,1.64e-26,47;UBERON:0003080,4.87e-26,40;UBERON:0002616,2.37e-25,46;UBERON:0002780,8.18e-25,39;UBERON:0001890,8.18e-25,39;UBERON:0006240,8.18e-25,39;UBERON:0000956,1.49e-22,21;UBERON:0001869,1.49e-22,21;UBERON:0000203,1.49e-22,21;UBERON:0003056,1.52e-21,49;UBERON:0002619,3.29e-19,17;UBERON:0010314,4.38e-19,92;UBERON:0002021,1.49e-18,10;UBERON:0000411,1.49e-18,10;UBERON:0001950,1.49e-18,10;UBERON:0002420,2.38e-11,8;UBERON:0007245,2.38e-11,8;UBERON:0010009,2.38e-11,8;UBERON:0010011,2.38e-11,8;UBERON:0000454,2.38e-11,8;UBERON:0002240,2.78e-11,6;UBERON:0005174,2.78e-11,6;UBERON:0001137,2.78e-11,6;UBERON:0000025,7.30e-11,114;UBERON:0001948,7.35e-10,5;UBERON:0002315,7.35e-10,5;UBERON:0004111,1.37e-09,122;UBERON:0011216,2.37e-09,194;UBERON:0003076,1.40e-08,12;UBERON:0003057,1.40e-08,12;UBERON:0002950,1.86e-07,4;UBERON:0001891,1.86e-07,4;UBERON:0009616,1.86e-07,4;UBERON:0010286,1.86e-07,4;UBERON:0002257,3.79e-07,3;UBERON:0000369,9.28e-07,5;UBERON:0002435,9.28e-07,5;UBERON:0000204,9.28e-07,5;UBERON:0010082,9.28e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,5.46254444320914,4.7609188134483,2.53532561402472,0.338844532069132,0,0,0,0,0,0.384218305321555,5.91030790158323,3.64516033495565,2.10324961351382,2.28520787523043,2.42955395046775,2.81728838194394,3.06705507258356,0.919218786610021,2.20231761998777,4.59674417106676,5.22262213071228,3.95658863190582,7.95942499340964,8.85552729946492,3.07101298901519,2.8138130501584,5.34793867218835,8.83885756421003,8.25755748634797,5.40558392893372,0.605809546665472,0.982430281388212,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.452167921657868,0.470354828542819,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.64769703345305,0.457500602818626,3.5183218591602,0.869121600961382,1.79000820131231,2.0778804455956,0.973447578406546,0.203678727700633,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,1.20563854268572,0.680364991513279,0.512454881139399,0.749613796477831,0.258703370739016,0.215567992932842,0,0.351902248327898,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.938104239924385,0.180062061461015,0.23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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:100195373..100195395,- | |||
|id=chr13:100195373..100195395,- | |||
|ontology_enrichment_celltype=CL:0000540!1.97e-20!33;CL:0000047!1.97e-20!33;CL:0000031!1.97e-20!33;CL:0000404!1.97e-20!33;CL:0000117!4.24e-17!23;CL:0000337!4.24e-17!23;CL:0000393!1.15e-16!39;CL:0000211!1.15e-16!39;CL:0000221!4.79e-16!44;CL:0000133!4.79e-16!44;CL:0002319!8.18e-16!43;CL:0000055!9.38e-13!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.23e-36,23;CL:0000337,8.23e-36,23;CL:0000540,2.29e-32,33;CL:0000047,2.29e-32,33;CL:0000031,2.29e-32,33;CL:0000404,2.29e-32,33;CL:0000393,2.87e-26,39;CL:0000211,2.87e-26,39;CL:0002319,3.73e-23,43;CL:0000221,1.83e-22,44;CL:0000133,1.83e-22,44;CL:0002321,1.57e-11,70;CL:0002609,1.34e-07,6;CL:0000723,2.30e-07,91;CL:0000048,2.30e-07,91;CL:0002612,3.79e-07,3;CL:0002613,5.65e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.60e-34!75;UBERON:0001016!9.60e-34!75;UBERON:0001017!1.00e-32!73;UBERON:0005743!1.00e-32!73;UBERON:0004121!2.00e-29!102;UBERON:0000924!2.00e-29!102;UBERON:0006601!2.00e-29!102;UBERON:0002346!8.86e-27!71;UBERON:0003075!8.86e-27!71;UBERON:0007284!8.86e-27!71;UBERON:0001049!1.46e-24!52;UBERON:0005068!1.46e-24!52;UBERON:0006241!1.46e-24!52;UBERON:0007135!1.46e-24!52;UBERON:0000033!2.61e-23!63;UBERON:0000955!8.70e-23!50;UBERON:0006238!8.70e-23!50;UBERON:0002616!3.28e-22!49;UBERON:0003056!8.66e-22!49;UBERON:0002020!1.73e-20!34;UBERON:0003080!2.77e-20!40;UBERON:0002780!1.06e-19!39;UBERON:0001890!1.06e-19!39;UBERON:0006240!1.06e-19!39;UBERON:0002791!9.48e-17!29;UBERON:0003528!9.48e-17!29;UBERON:0001893!9.48e-17!29;UBERON:0000956!1.58e-11!21;UBERON:0001869!1.58e-11!21;UBERON:0000203!1.58e-11!21;UBERON:0007811!5.89e-11!86;UBERON:0000153!4.54e-10!94;UBERON:0002619!3.70e-09!17;UBERON:0002021!1.08e-08!10;UBERON:0000411!1.08e-08!10;UBERON:0001950!1.08e-08!10;UBERON:0000025!4.70e-07!114;UBERON:0004111!6.07e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-42,73;UBERON:0002020,9.87e-42,34;UBERON:0001016,2.95e-41,75;UBERON:0000073,1.27e-37,54;UBERON:0001049,1.88e-34,52;UBERON:0005068,1.88e-34,52;UBERON:0006241,1.88e-34,52;UBERON:0007135,1.88e-34,52;UBERON:0003528,5.76e-33,29;UBERON:0002791,5.76e-33,29;UBERON:0001893,5.76e-33,29;UBERON:0004121,7.14e-32,95;UBERON:0000924,7.14e-32,95;UBERON:0006601,7.14e-32,95;UBERON:0002346,1.29e-31,64;UBERON:0003075,1.29e-31,64;UBERON:0007284,1.29e-31,64;UBERON:0010371,1.55e-26,73;UBERON:0000955,1.64e-26,47;UBERON:0006238,1.64e-26,47;UBERON:0003080,4.87e-26,40;UBERON:0002616,2.37e-25,46;UBERON:0002780,8.18e-25,39;UBERON:0001890,8.18e-25,39;UBERON:0006240,8.18e-25,39;UBERON:0000956,1.49e-22,21;UBERON:0001869,1.49e-22,21;UBERON:0000203,1.49e-22,21;UBERON:0003056,1.52e-21,49;UBERON:0002619,3.29e-19,17;UBERON:0010314,4.38e-19,92;UBERON:0002021,1.49e-18,10;UBERON:0000411,1.49e-18,10;UBERON:0001950,1.49e-18,10;UBERON:0002420,2.38e-11,8;UBERON:0007245,2.38e-11,8;UBERON:0010009,2.38e-11,8;UBERON:0010011,2.38e-11,8;UBERON:0000454,2.38e-11,8;UBERON:0002240,2.78e-11,6;UBERON:0005174,2.78e-11,6;UBERON:0001137,2.78e-11,6;UBERON:0000025,7.30e-11,114;UBERON:0001948,7.35e-10,5;UBERON:0002315,7.35e-10,5;UBERON:0004111,1.37e-09,122;UBERON:0011216,2.37e-09,194;UBERON:0003076,1.40e-08,12;UBERON:0003057,1.40e-08,12;UBERON:0002950,1.86e-07,4;UBERON:0001891,1.86e-07,4;UBERON:0009616,1.86e-07,4;UBERON:0010286,1.86e-07,4;UBERON:0002257,3.79e-07,3;UBERON:0000369,9.28e-07,5;UBERON:0002435,9.28e-07,5;UBERON:0000204,9.28e-07,5;UBERON:0010082,9.28e-07,5 | |||
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|short_description=p@chr13:100195373..100195395,- | |||
}} |
Revision as of 23:40, 12 September 2013
Short description: | p@chr13:100195373..100195395, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100195373..100195395, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.23e-36 | 23 |
neuroblast (sensu Vertebrata) | 8.23e-36 | 23 |
neuron | 2.29e-32 | 33 |
neuronal stem cell | 2.29e-32 | 33 |
neuroblast | 2.29e-32 | 33 |
electrically signaling cell | 2.29e-32 | 33 |
electrically responsive cell | 2.87e-26 | 39 |
electrically active cell | 2.87e-26 | 39 |
neural cell | 3.73e-23 | 43 |
ectodermal cell | 1.83e-22 | 44 |
neurectodermal cell | 1.83e-22 | 44 |
embryonic cell | 1.57e-11 | 70 |
neuron of cerebral cortex | 1.34e-07 | 6 |
somatic stem cell | 2.30e-07 | 91 |
multi fate stem cell | 2.30e-07 | 91 |
neuron of the ventral spinal cord | 3.79e-07 | 3 |
striatum neuron | 5.65e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.