FFCP PHASE1:Mm9::chr9:52487782..52487791,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=330941|HGNC=|MCL_coexpression_id=2|UniProt=Q32M26,Q8BPR8|association_with_transcript=-248bp_to_ENSMUST00000098768,NM_178906,uc009plx.2_5end|description=CAGE_peak_4_at_AI593442_5end|id=chr9:52487782..52487791,-|ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0000540!1.97e-10!33;CL:0000047!1.97e-10!33;CL:0000031!1.97e-10!33;CL:0000404!1.97e-10!33;CL:0002319!4.28e-09!43;CL:0000221!9.71e-09!44;CL:0000133!9.71e-09!44;CL:0000393!6.38e-08!39;CL:0000211!6.38e-08!39;CL:0000055!6.25e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.49e-10,23;CL:0000337,5.49e-10,23;CL:0002610,8.14e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.85e-33!73;UBERON:0005743!1.85e-33!73;UBERON:0001049!1.82e-32!52;UBERON:0005068!1.82e-32!52;UBERON:0006241!1.82e-32!52;UBERON:0007135!1.82e-32!52;UBERON:0000033!2.49e-32!63;UBERON:0000073!3.94e-32!75;UBERON:0001016!3.94e-32!75;UBERON:0000955!4.41e-30!50;UBERON:0006238!4.41e-30!50;UBERON:0002616!3.07e-29!49;UBERON:0002346!3.89e-29!71;UBERON:0003075!3.89e-29!71;UBERON:0007284!3.89e-29!71;UBERON:0002020!1.04e-27!34;UBERON:0003056!2.41e-27!49;UBERON:0004121!4.75e-27!102;UBERON:0000924!4.75e-27!102;UBERON:0006601!4.75e-27!102;UBERON:0003080!1.12e-23!40;UBERON:0002780!1.35e-22!39;UBERON:0001890!1.35e-22!39;UBERON:0006240!1.35e-22!39;UBERON:0002791!2.01e-22!29;UBERON:0003528!2.01e-22!29;UBERON:0001893!2.01e-22!29;UBERON:0007811!1.03e-19!86;UBERON:0000153!8.21e-17!94;UBERON:0002619!8.94e-15!17;UBERON:0000956!2.33e-14!21;UBERON:0001869!2.33e-14!21;UBERON:0000203!2.33e-14!21;UBERON:0002021!4.91e-14!10;UBERON:0000411!4.91e-14!10;UBERON:0001950!4.91e-14!10;UBERON:0000025!1.24e-09!114;UBERON:0002420!1.96e-09!8;UBERON:0007245!1.96e-09!8;UBERON:0010009!1.96e-09!8;UBERON:0010011!1.96e-09!8;UBERON:0000454!1.96e-09!8;UBERON:0004111!2.45e-09!122;UBERON:0003076!4.87e-09!12;UBERON:0003057!4.87e-09!12;UBERON:0002298!7.07e-08!6;UBERON:0002240!1.16e-07!6;UBERON:0005174!1.16e-07!6;UBERON:0001137!1.16e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.04e-38,54;UBERON:0001049,7.90e-34,52;UBERON:0005068,7.90e-34,52;UBERON:0006241,7.90e-34,52;UBERON:0007135,7.90e-34,52;UBERON:0002020,3.78e-31,34;UBERON:0001017,4.06e-31,73;UBERON:0002021,3.49e-30,10;UBERON:0000411,3.49e-30,10;UBERON:0001950,3.49e-30,10;UBERON:0001016,3.81e-30,75;UBERON:0002616,2.56e-27,46;UBERON:0003528,6.30e-27,29;UBERON:0002791,6.30e-27,29;UBERON:0001893,6.30e-27,29;UBERON:0000955,1.23e-26,47;UBERON:0006238,1.23e-26,47;UBERON:0002346,1.58e-26,64;UBERON:0003075,1.58e-26,64;UBERON:0007284,1.58e-26,64;UBERON:0003080,3.75e-26,40;UBERON:0002780,3.42e-24,39;UBERON:0001890,3.42e-24,39;UBERON:0006240,3.42e-24,39;UBERON:0004121,1.16e-22,95;UBERON:0000924,1.16e-22,95;UBERON:0006601,1.16e-22,95;UBERON:0010371,1.28e-22,73;UBERON:0002619,1.39e-20,17;UBERON:0003056,1.48e-20,49;UBERON:0000956,2.02e-19,21;UBERON:0001869,2.02e-19,21;UBERON:0000203,2.02e-19,21;UBERON:0010314,7.12e-17,92;UBERON:0000025,1.33e-12,114;UBERON:0004111,1.99e-11,122;UBERON:0004684,8.14e-09,3;UBERON:0002275,8.14e-09,3;UBERON:0002420,1.56e-08,8;UBERON:0007245,1.56e-08,8;UBERON:0010009,1.56e-08,8;UBERON:0010011,1.56e-08,8;UBERON:0000454,1.56e-08,8;UBERON:0011216,3.14e-08,194;UBERON:0003076,6.51e-08,12;UBERON:0003057,6.51e-08,12;UBERON:0002240,1.56e-07,6;UBERON:0005174,1.56e-07,6;UBERON:0001137,1.56e-07,6;UBERON:0001896,9.07e-07,2;UBERON:0002298,9.07e-07,2;UBERON:0005290,9.07e-07,2;UBERON:0010096,9.07e-07,2;UBERON:0002950,9.27e-07,4;UBERON:0001891,9.27e-07,4;UBERON:0009616,9.27e-07,4;UBERON:0010286,9.27e-07,4|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,1.05798195854407,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,1.42825492201902,1.10434270475807,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.78762273319263,2.30409799884365,1.31886287730194,0.365950574409639,0.52091337055676,1.3959149950069,0.56276261003168,1.98637722109853,0.883885756421003,0.711858403995515,1.1183966749518,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.79748767285787,5.03250663100489,1.00523481690292,4.34560800480691,5.37002460393694,3.1168206683934,2.10913641988085,0,0,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0,0.0680364991513279,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,4.41608891984667,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,3.21101179975584,1.99259867206745,0,0,0,0,0,0,0,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.3885110557024,6.90487854760765,5.72895513439397,2.749650917499,4.11049511862385,4.5323633843382,8.10027000278167,6.30449684513909,3.17199686288943,6.21312374102184,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.192075457214608,0.17230640686684,0,0,0.38581844092741,0,0.294397840268795,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0.237270036248348,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p4@AI593442}} | ||
|EntrezGene=330941 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q32M26,Q8BPR8 | |||
|association_with_transcript=-248bp_to_ENSMUST00000098768,NM_178906,uc009plx.2_5end | |||
|description=CAGE_peak_4_at_AI593442_5end | |||
|id=chr9:52487782..52487791,- | |||
|ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0000540!1.97e-10!33;CL:0000047!1.97e-10!33;CL:0000031!1.97e-10!33;CL:0000404!1.97e-10!33;CL:0002319!4.28e-09!43;CL:0000221!9.71e-09!44;CL:0000133!9.71e-09!44;CL:0000393!6.38e-08!39;CL:0000211!6.38e-08!39;CL:0000055!6.25e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.49e-10,23;CL:0000337,5.49e-10,23;CL:0002610,8.14e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.85e-33!73;UBERON:0005743!1.85e-33!73;UBERON:0001049!1.82e-32!52;UBERON:0005068!1.82e-32!52;UBERON:0006241!1.82e-32!52;UBERON:0007135!1.82e-32!52;UBERON:0000033!2.49e-32!63;UBERON:0000073!3.94e-32!75;UBERON:0001016!3.94e-32!75;UBERON:0000955!4.41e-30!50;UBERON:0006238!4.41e-30!50;UBERON:0002616!3.07e-29!49;UBERON:0002346!3.89e-29!71;UBERON:0003075!3.89e-29!71;UBERON:0007284!3.89e-29!71;UBERON:0002020!1.04e-27!34;UBERON:0003056!2.41e-27!49;UBERON:0004121!4.75e-27!102;UBERON:0000924!4.75e-27!102;UBERON:0006601!4.75e-27!102;UBERON:0003080!1.12e-23!40;UBERON:0002780!1.35e-22!39;UBERON:0001890!1.35e-22!39;UBERON:0006240!1.35e-22!39;UBERON:0002791!2.01e-22!29;UBERON:0003528!2.01e-22!29;UBERON:0001893!2.01e-22!29;UBERON:0007811!1.03e-19!86;UBERON:0000153!8.21e-17!94;UBERON:0002619!8.94e-15!17;UBERON:0000956!2.33e-14!21;UBERON:0001869!2.33e-14!21;UBERON:0000203!2.33e-14!21;UBERON:0002021!4.91e-14!10;UBERON:0000411!4.91e-14!10;UBERON:0001950!4.91e-14!10;UBERON:0000025!1.24e-09!114;UBERON:0002420!1.96e-09!8;UBERON:0007245!1.96e-09!8;UBERON:0010009!1.96e-09!8;UBERON:0010011!1.96e-09!8;UBERON:0000454!1.96e-09!8;UBERON:0004111!2.45e-09!122;UBERON:0003076!4.87e-09!12;UBERON:0003057!4.87e-09!12;UBERON:0002298!7.07e-08!6;UBERON:0002240!1.16e-07!6;UBERON:0005174!1.16e-07!6;UBERON:0001137!1.16e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.04e-38,54;UBERON:0001049,7.90e-34,52;UBERON:0005068,7.90e-34,52;UBERON:0006241,7.90e-34,52;UBERON:0007135,7.90e-34,52;UBERON:0002020,3.78e-31,34;UBERON:0001017,4.06e-31,73;UBERON:0002021,3.49e-30,10;UBERON:0000411,3.49e-30,10;UBERON:0001950,3.49e-30,10;UBERON:0001016,3.81e-30,75;UBERON:0002616,2.56e-27,46;UBERON:0003528,6.30e-27,29;UBERON:0002791,6.30e-27,29;UBERON:0001893,6.30e-27,29;UBERON:0000955,1.23e-26,47;UBERON:0006238,1.23e-26,47;UBERON:0002346,1.58e-26,64;UBERON:0003075,1.58e-26,64;UBERON:0007284,1.58e-26,64;UBERON:0003080,3.75e-26,40;UBERON:0002780,3.42e-24,39;UBERON:0001890,3.42e-24,39;UBERON:0006240,3.42e-24,39;UBERON:0004121,1.16e-22,95;UBERON:0000924,1.16e-22,95;UBERON:0006601,1.16e-22,95;UBERON:0010371,1.28e-22,73;UBERON:0002619,1.39e-20,17;UBERON:0003056,1.48e-20,49;UBERON:0000956,2.02e-19,21;UBERON:0001869,2.02e-19,21;UBERON:0000203,2.02e-19,21;UBERON:0010314,7.12e-17,92;UBERON:0000025,1.33e-12,114;UBERON:0004111,1.99e-11,122;UBERON:0004684,8.14e-09,3;UBERON:0002275,8.14e-09,3;UBERON:0002420,1.56e-08,8;UBERON:0007245,1.56e-08,8;UBERON:0010009,1.56e-08,8;UBERON:0010011,1.56e-08,8;UBERON:0000454,1.56e-08,8;UBERON:0011216,3.14e-08,194;UBERON:0003076,6.51e-08,12;UBERON:0003057,6.51e-08,12;UBERON:0002240,1.56e-07,6;UBERON:0005174,1.56e-07,6;UBERON:0001137,1.56e-07,6;UBERON:0001896,9.07e-07,2;UBERON:0002298,9.07e-07,2;UBERON:0005290,9.07e-07,2;UBERON:0010096,9.07e-07,2;UBERON:0002950,9.27e-07,4;UBERON:0001891,9.27e-07,4;UBERON:0009616,9.27e-07,4;UBERON:0010286,9.27e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,1.05798195854407,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,1.42825492201902,1.10434270475807,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.78762273319263,2.30409799884365,1.31886287730194,0.365950574409639,0.52091337055676,1.3959149950069,0.56276261003168,1.98637722109853,0.883885756421003,0.711858403995515,1.1183966749518,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.79748767285787,5.03250663100489,1.00523481690292,4.34560800480691,5.37002460393694,3.1168206683934,2.10913641988085,0,0,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0,0.0680364991513279,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,4.41608891984667,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,3.21101179975584,1.99259867206745,0,0,0,0,0,0,0,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.3885110557024,6.90487854760765,5.72895513439397,2.749650917499,4.11049511862385,4.5323633843382,8.10027000278167,6.30449684513909,3.17199686288943,6.21312374102184,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.192075457214608,0.17230640686684,0,0,0.38581844092741,0,0.294397840268795,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0.237270036248348,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p4@AI593442 | |||
}} |
Revision as of 18:12, 14 September 2013
Short description: | p4@AI593442 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_AI593442_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -248bp_to_ENSMUST00000098768, NM_178906, uc009plx.2_5end |
EntrezGene: | AI593442 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.49e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.49e-10 | 23 |
raphe nuclei neuron | 8.14e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.