FFCP PHASE1:Mm9::chr8:72632345..72632357,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=530|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:72632345..72632357,-|id=chr8:72632345..72632357,-|ontology_enrichment_celltype=CL:0002319!1.82e-23!43;CL:0000221!1.07e-22!44;CL:0000133!1.07e-22!44;CL:0000117!4.42e-22!23;CL:0000337!4.42e-22!23;CL:0000055!9.60e-19!50;CL:0000540!1.36e-17!33;CL:0000047!1.36e-17!33;CL:0000031!1.36e-17!33;CL:0000404!1.36e-17!33;CL:0000393!1.04e-13!39;CL:0000211!1.04e-13!39;CL:0002321!1.27e-10!70;CL:0000220!1.27e-10!70;CL:0002453!8.02e-09!8|ontology_enrichment_celltype_v019_2=CL:0002319,8.31e-28,43;CL:0000221,4.56e-27,44;CL:0000133,4.56e-27,44;CL:0000117,1.97e-24,23;CL:0000337,1.97e-24,23;CL:0002453,1.52e-17,8;CL:0000540,4.71e-16,33;CL:0000047,4.71e-16,33;CL:0000031,4.71e-16,33;CL:0000404,4.71e-16,33;CL:0002321,2.96e-15,70;CL:0000333,7.79e-14,10;CL:0000095,7.79e-14,10;CL:0000243,7.79e-14,10;CL:0000123,7.79e-14,10;CL:0000125,7.79e-14,10;CL:0000030,7.79e-14,10;CL:0000339,7.79e-14,10;CL:0000393,4.31e-13,39;CL:0000211,4.31e-13,39;CL:0000128,6.82e-12,6;CL:0000126,6.82e-12,6;CL:0000127,6.82e-12,6;CL:0002612,1.39e-09,3;CL:0002613,7.91e-09,3;CL:0000878,1.69e-07,2;CL:0000129,1.69e-07,2;CL:0002611,3.15e-07,2;CL:0002605,7.55e-07,2;CL:0002604,7.55e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.18e-38!73;UBERON:0005743!1.18e-38!73;UBERON:0000073!3.42e-37!75;UBERON:0001016!3.42e-37!75;UBERON:0002020!4.57e-31!34;UBERON:0001049!2.26e-30!52;UBERON:0005068!2.26e-30!52;UBERON:0006241!2.26e-30!52;UBERON:0007135!2.26e-30!52;UBERON:0004121!1.55e-26!102;UBERON:0000924!1.55e-26!102;UBERON:0006601!1.55e-26!102;UBERON:0000955!1.04e-25!50;UBERON:0006238!1.04e-25!50;UBERON:0002346!4.84e-25!71;UBERON:0003075!4.84e-25!71;UBERON:0007284!4.84e-25!71;UBERON:0002616!1.03e-24!49;UBERON:0003080!1.13e-24!40;UBERON:0002791!2.18e-24!29;UBERON:0003528!2.18e-24!29;UBERON:0001893!2.18e-24!29;UBERON:0002780!1.06e-23!39;UBERON:0001890!1.06e-23!39;UBERON:0006240!1.06e-23!39;UBERON:0003056!6.51e-21!49;UBERON:0000033!2.27e-20!63;UBERON:0000956!5.28e-18!21;UBERON:0001869!5.28e-18!21;UBERON:0000203!5.28e-18!21;UBERON:0002619!9.59e-14!17;UBERON:0007811!7.33e-12!86;UBERON:0000153!6.22e-10!94;UBERON:0002021!1.23e-08!10;UBERON:0000411!1.23e-08!10;UBERON:0001950!1.23e-08!10;UBERON:0002240!1.66e-08!6;UBERON:0005174!1.66e-08!6;UBERON:0001137!1.66e-08!6;UBERON:0001948!5.66e-08!5;UBERON:0002315!5.66e-08!5;UBERON:0000025!1.77e-07!114;UBERON:0002420!1.78e-07!8;UBERON:0007245!1.78e-07!8;UBERON:0010009!1.78e-07!8;UBERON:0010011!1.78e-07!8;UBERON:0000454!1.78e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.16e-43,34;UBERON:0001017,8.04e-35,73;UBERON:0001016,9.61e-34,75;UBERON:0003528,6.16e-31,29;UBERON:0002791,6.16e-31,29;UBERON:0001893,6.16e-31,29;UBERON:0000073,9.37e-31,54;UBERON:0001049,1.53e-29,52;UBERON:0005068,1.53e-29,52;UBERON:0006241,1.53e-29,52;UBERON:0007135,1.53e-29,52;UBERON:0004121,1.87e-25,95;UBERON:0000924,1.87e-25,95;UBERON:0006601,1.87e-25,95;UBERON:0000956,7.45e-24,21;UBERON:0001869,7.45e-24,21;UBERON:0000203,7.45e-24,21;UBERON:0002346,4.94e-23,64;UBERON:0003075,4.94e-23,64;UBERON:0007284,4.94e-23,64;UBERON:0002780,5.98e-22,39;UBERON:0001890,5.98e-22,39;UBERON:0006240,5.98e-22,39;UBERON:0002619,6.93e-22,17;UBERON:0003080,2.68e-21,40;UBERON:0002616,2.59e-20,46;UBERON:0000955,8.67e-20,47;UBERON:0006238,8.67e-20,47;UBERON:0010371,1.49e-19,73;UBERON:0002021,1.36e-17,10;UBERON:0000411,1.36e-17,10;UBERON:0001950,1.36e-17,10;UBERON:0003056,1.25e-16,49;UBERON:0001948,3.52e-15,5;UBERON:0002315,3.52e-15,5;UBERON:0010314,1.95e-14,92;UBERON:0002240,1.35e-12,6;UBERON:0005174,1.35e-12,6;UBERON:0001137,1.35e-12,6;UBERON:0000025,1.23e-10,114;UBERON:0004111,1.35e-09,122;UBERON:0002257,1.39e-09,3;UBERON:0011216,1.77e-09,194;UBERON:0000369,9.29e-09,5;UBERON:0002435,9.29e-09,5;UBERON:0000204,9.29e-09,5;UBERON:0010082,9.29e-09,5;UBERON:0003076,1.24e-08,12;UBERON:0003057,1.24e-08,12;UBERON:0002420,4.06e-08,8;UBERON:0007245,4.06e-08,8;UBERON:0010009,4.06e-08,8;UBERON:0010011,4.06e-08,8;UBERON:0000454,4.06e-08,8;UBERON:0002256,3.15e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,2.85592037554813,2.91644848611425,1.25987779462826,1.43752564364972,0,0,0,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0,0,0,0,0,10.4860038681442,5.76327457982332,1.34796496001021,3.78016627328734,0.420649922702764,4.28476476605705,3.3130281142742,0.61245399607477,1.0543001812006,0,0,0.638436690425939,1.22885226604995,1.18697658957174,2.74462930807229,1.56274011167028,1.11673199600552,0.56276261003168,0.45839474333043,8.83885756421003,4.12877874317399,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,1.00523481690292,0.695297280769106,0.511430914660661,0.83115217823824,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=530 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:72632345..72632357,- | |||
|id=chr8:72632345..72632357,- | |||
|ontology_enrichment_celltype=CL:0002319!1.82e-23!43;CL:0000221!1.07e-22!44;CL:0000133!1.07e-22!44;CL:0000117!4.42e-22!23;CL:0000337!4.42e-22!23;CL:0000055!9.60e-19!50;CL:0000540!1.36e-17!33;CL:0000047!1.36e-17!33;CL:0000031!1.36e-17!33;CL:0000404!1.36e-17!33;CL:0000393!1.04e-13!39;CL:0000211!1.04e-13!39;CL:0002321!1.27e-10!70;CL:0000220!1.27e-10!70;CL:0002453!8.02e-09!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.31e-28,43;CL:0000221,4.56e-27,44;CL:0000133,4.56e-27,44;CL:0000117,1.97e-24,23;CL:0000337,1.97e-24,23;CL:0002453,1.52e-17,8;CL:0000540,4.71e-16,33;CL:0000047,4.71e-16,33;CL:0000031,4.71e-16,33;CL:0000404,4.71e-16,33;CL:0002321,2.96e-15,70;CL:0000333,7.79e-14,10;CL:0000095,7.79e-14,10;CL:0000243,7.79e-14,10;CL:0000123,7.79e-14,10;CL:0000125,7.79e-14,10;CL:0000030,7.79e-14,10;CL:0000339,7.79e-14,10;CL:0000393,4.31e-13,39;CL:0000211,4.31e-13,39;CL:0000128,6.82e-12,6;CL:0000126,6.82e-12,6;CL:0000127,6.82e-12,6;CL:0002612,1.39e-09,3;CL:0002613,7.91e-09,3;CL:0000878,1.69e-07,2;CL:0000129,1.69e-07,2;CL:0002611,3.15e-07,2;CL:0002605,7.55e-07,2;CL:0002604,7.55e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.18e-38!73;UBERON:0005743!1.18e-38!73;UBERON:0000073!3.42e-37!75;UBERON:0001016!3.42e-37!75;UBERON:0002020!4.57e-31!34;UBERON:0001049!2.26e-30!52;UBERON:0005068!2.26e-30!52;UBERON:0006241!2.26e-30!52;UBERON:0007135!2.26e-30!52;UBERON:0004121!1.55e-26!102;UBERON:0000924!1.55e-26!102;UBERON:0006601!1.55e-26!102;UBERON:0000955!1.04e-25!50;UBERON:0006238!1.04e-25!50;UBERON:0002346!4.84e-25!71;UBERON:0003075!4.84e-25!71;UBERON:0007284!4.84e-25!71;UBERON:0002616!1.03e-24!49;UBERON:0003080!1.13e-24!40;UBERON:0002791!2.18e-24!29;UBERON:0003528!2.18e-24!29;UBERON:0001893!2.18e-24!29;UBERON:0002780!1.06e-23!39;UBERON:0001890!1.06e-23!39;UBERON:0006240!1.06e-23!39;UBERON:0003056!6.51e-21!49;UBERON:0000033!2.27e-20!63;UBERON:0000956!5.28e-18!21;UBERON:0001869!5.28e-18!21;UBERON:0000203!5.28e-18!21;UBERON:0002619!9.59e-14!17;UBERON:0007811!7.33e-12!86;UBERON:0000153!6.22e-10!94;UBERON:0002021!1.23e-08!10;UBERON:0000411!1.23e-08!10;UBERON:0001950!1.23e-08!10;UBERON:0002240!1.66e-08!6;UBERON:0005174!1.66e-08!6;UBERON:0001137!1.66e-08!6;UBERON:0001948!5.66e-08!5;UBERON:0002315!5.66e-08!5;UBERON:0000025!1.77e-07!114;UBERON:0002420!1.78e-07!8;UBERON:0007245!1.78e-07!8;UBERON:0010009!1.78e-07!8;UBERON:0010011!1.78e-07!8;UBERON:0000454!1.78e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.16e-43,34;UBERON:0001017,8.04e-35,73;UBERON:0001016,9.61e-34,75;UBERON:0003528,6.16e-31,29;UBERON:0002791,6.16e-31,29;UBERON:0001893,6.16e-31,29;UBERON:0000073,9.37e-31,54;UBERON:0001049,1.53e-29,52;UBERON:0005068,1.53e-29,52;UBERON:0006241,1.53e-29,52;UBERON:0007135,1.53e-29,52;UBERON:0004121,1.87e-25,95;UBERON:0000924,1.87e-25,95;UBERON:0006601,1.87e-25,95;UBERON:0000956,7.45e-24,21;UBERON:0001869,7.45e-24,21;UBERON:0000203,7.45e-24,21;UBERON:0002346,4.94e-23,64;UBERON:0003075,4.94e-23,64;UBERON:0007284,4.94e-23,64;UBERON:0002780,5.98e-22,39;UBERON:0001890,5.98e-22,39;UBERON:0006240,5.98e-22,39;UBERON:0002619,6.93e-22,17;UBERON:0003080,2.68e-21,40;UBERON:0002616,2.59e-20,46;UBERON:0000955,8.67e-20,47;UBERON:0006238,8.67e-20,47;UBERON:0010371,1.49e-19,73;UBERON:0002021,1.36e-17,10;UBERON:0000411,1.36e-17,10;UBERON:0001950,1.36e-17,10;UBERON:0003056,1.25e-16,49;UBERON:0001948,3.52e-15,5;UBERON:0002315,3.52e-15,5;UBERON:0010314,1.95e-14,92;UBERON:0002240,1.35e-12,6;UBERON:0005174,1.35e-12,6;UBERON:0001137,1.35e-12,6;UBERON:0000025,1.23e-10,114;UBERON:0004111,1.35e-09,122;UBERON:0002257,1.39e-09,3;UBERON:0011216,1.77e-09,194;UBERON:0000369,9.29e-09,5;UBERON:0002435,9.29e-09,5;UBERON:0000204,9.29e-09,5;UBERON:0010082,9.29e-09,5;UBERON:0003076,1.24e-08,12;UBERON:0003057,1.24e-08,12;UBERON:0002420,4.06e-08,8;UBERON:0007245,4.06e-08,8;UBERON:0010009,4.06e-08,8;UBERON:0010011,4.06e-08,8;UBERON:0000454,4.06e-08,8;UBERON:0002256,3.15e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,2.85592037554813,2.91644848611425,1.25987779462826,1.43752564364972,0,0,0,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0,0,0,0,0,10.4860038681442,5.76327457982332,1.34796496001021,3.78016627328734,0.420649922702764,4.28476476605705,3.3130281142742,0.61245399607477,1.0543001812006,0,0,0.638436690425939,1.22885226604995,1.18697658957174,2.74462930807229,1.56274011167028,1.11673199600552,0.56276261003168,0.45839474333043,8.83885756421003,4.12877874317399,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,1.00523481690292,0.695297280769106,0.511430914660661,0.83115217823824,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,4.14292712856459,2.86447756719698,2.92150409984269,0,3.0215755895588,1.35004500046361,0,2.26571204492102,2.07104124700728,0.103787347584177,0,0,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p@chr8:72632345..72632357,- | |||
}} |
Revision as of 15:56, 14 September 2013
Short description: | p@chr8:72632345..72632357, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:72632345..72632357, - |
Coexpression cluster: | MCL_coexpression_mm9:530 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.31e-28 | 43 |
ectodermal cell | 4.56e-27 | 44 |
neurectodermal cell | 4.56e-27 | 44 |
CNS neuron (sensu Vertebrata) | 1.97e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.97e-24 | 23 |
oligodendrocyte precursor cell | 1.52e-17 | 8 |
neuron | 4.71e-16 | 33 |
neuronal stem cell | 4.71e-16 | 33 |
neuroblast | 4.71e-16 | 33 |
electrically signaling cell | 4.71e-16 | 33 |
embryonic cell | 2.96e-15 | 70 |
migratory neural crest cell | 7.79e-14 | 10 |
neuron associated cell | 7.79e-14 | 10 |
glial cell (sensu Vertebrata) | 7.79e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 7.79e-14 | 10 |
glial cell | 7.79e-14 | 10 |
glioblast | 7.79e-14 | 10 |
glioblast (sensu Vertebrata) | 7.79e-14 | 10 |
electrically responsive cell | 4.31e-13 | 39 |
electrically active cell | 4.31e-13 | 39 |
oligodendrocyte | 6.82e-12 | 6 |
macroglial cell | 6.82e-12 | 6 |
astrocyte | 6.82e-12 | 6 |
neuron of the ventral spinal cord | 1.39e-09 | 3 |
striatum neuron | 7.91e-09 | 3 |
central nervous system macrophage | 1.69e-07 | 2 |
microglial cell | 1.69e-07 | 2 |
neuron of the dorsal spinal cord | 3.15e-07 | 2 |
astrocyte of the cerebral cortex | 7.55e-07 | 2 |
astrocyte of the hippocampus | 7.55e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.