FFCP PHASE1:Hg19::chr2:45169024..45169033,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6496|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10889|TSSclassifier=S|UniProt=O95343|association_with_transcript=-3bp_to_NM_005413,uc002run.1_5end|coexpression_cluster_id=C1905|description=CAGE_peak_12_at_SIX3_5end|id=chr2:45169024..45169033,+|ontology_enrichment_celltype=CL:0002586!2.08e-09!3;CL:0000064!2.40e-09!3;CL:0005012!2.40e-09!3;CL:0000067!2.40e-09!3;CL:0002304!2.40e-09!3;CL:0000306!2.21e-07!4;CL:0002222!2.21e-07!4;CL:0002224!2.21e-07!4;CL:0000149!3.83e-07!4|ontology_enrichment_celltype_v019=CL:0000306;1.81e-09;4!CL:0002222;1.81e-09;4!CL:0002224;1.81e-09;4!CL:0000333;9.54e-08;5|ontology_enrichment_celltype_v019_2=CL:0000306,2.15e-09,4;CL:0002222,2.15e-09,4;CL:0002224,2.15e-09,4|ontology_enrichment_development_v019=UBERON:0010122;5.36e-19;2!UBERON:0003056;1.45e-12;3|ontology_enrichment_disease=DOID:171!9.86e-10!10;DOID:169!5.02e-08!6;DOID:5409!9.92e-07!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!3.51e-27!61;UBERON:0002346!8.84e-26!90;UBERON:0007625!7.11e-25!11;UBERON:0003075!9.26e-24!86;UBERON:0007284!9.26e-24!86;UBERON:0000970!3.06e-22!20;UBERON:0002104!5.05e-21!21;UBERON:0000019!7.24e-20!19;UBERON:0000047!7.24e-20!19;UBERON:0004088!7.24e-20!19;UBERON:0003072!7.24e-20!19;UBERON:0003071!7.24e-20!19;UBERON:0004128!7.24e-20!19;UBERON:0000020!6.60e-19!23;UBERON:0001032!5.56e-18!24;UBERON:0004456!5.56e-18!24;UBERON:0001456!1.08e-17!21;UBERON:0009663!1.84e-15!7;UBERON:0000966!5.17e-15!5;UBERON:0005388!5.17e-15!5;UBERON:0001802!5.17e-15!5;UBERON:0000924!1.15e-14!173;UBERON:0006601!1.15e-14!173;UBERON:0000073!1.87e-14!94;UBERON:0001016!1.87e-14!94;UBERON:0004121!2.98e-13!169;UBERON:0000369!5.63e-13!4;UBERON:0002435!5.63e-13!4;UBERON:0000204!5.63e-13!4;UBERON:0010082!5.63e-13!4;UBERON:0000033!9.25e-13!123;UBERON:0005743!2.07e-12!86;UBERON:0005085!5.13e-12!29;UBERON:0002780!6.64e-12!41;UBERON:0001890!6.64e-12!41;UBERON:0006240!6.64e-12!41;UBERON:0000488!7.22e-12!4;UBERON:0002308!7.68e-12!9;UBERON:0002420!7.68e-12!9;UBERON:0000125!7.68e-12!9;UBERON:0007245!7.68e-12!9;UBERON:0010009!7.68e-12!9;UBERON:0010011!7.68e-12!9;UBERON:0000454!7.68e-12!9;UBERON:0000153!7.93e-12!129;UBERON:0007811!7.93e-12!129;UBERON:0003080!1.53e-11!42;UBERON:0005383!2.03e-10!3;UBERON:0005382!2.03e-10!3;UBERON:0001894!2.05e-10!7;UBERON:0006222!2.05e-10!7;UBERON:0001049!5.23e-10!57;UBERON:0005068!5.23e-10!57;UBERON:0006241!5.23e-10!57;UBERON:0007135!5.23e-10!57;UBERON:0001264!6.38e-10!10;UBERON:0003922!6.38e-10!10;UBERON:0003923!6.38e-10!10;UBERON:0003924!6.38e-10!10;UBERON:0003921!6.38e-10!10;UBERON:0002114!7.85e-10!12;UBERON:0002616!1.54e-09!59;UBERON:0001781!2.08e-09!3;UBERON:0001782!2.08e-09!3;UBERON:0005424!2.08e-09!3;UBERON:0001801!2.26e-09!14;UBERON:0001778!2.40e-09!3;UBERON:0001775!2.40e-09!3;UBERON:0001045!5.97e-09!11;UBERON:0002075!6.78e-09!18;UBERON:0000955!1.38e-08!69;UBERON:0006238!1.38e-08!69;UBERON:0001017!1.82e-08!82;UBERON:0002108!2.24e-08!14;UBERON:0002203!6.61e-08!6;UBERON:0001768!6.61e-08!6;UBERON:0001873!1.66e-07!2;UBERON:0010122!1.66e-07!2;UBERON:0000007!1.82e-07!2;UBERON:0003296!1.86e-07!4;UBERON:0010133!1.86e-07!4;UBERON:0010077!2.21e-07!4;UBERON:0005389!2.21e-07!4;UBERON:0000484!2.21e-07!4;UBERON:0002546!2.21e-07!4;UBERON:0000965!2.21e-07!4;UBERON:0001803!2.21e-07!4;UBERON:0003073!2.21e-07!4;UBERON:0005426!2.21e-07!4;UBERON:0001444!2.73e-07!48;UBERON:0001875!6.75e-07!2;UBERON:0006514!6.75e-07!2;UBERON:0001869!8.96e-07!32|ontology_enrichment_uberon_v019=UBERON:0005383;1.91e-27;3!UBERON:0005382;1.91e-27;3!UBERON:0000369;9.43e-21;4!UBERON:0002435;9.43e-21;4!UBERON:0000204;9.43e-21;4!UBERON:0009663;1.93e-20;7!UBERON:0001873;5.36e-19;2!UBERON:0000007;6.42e-19;2!UBERON:0000966;3.92e-16;5!UBERON:0005388;3.92e-16;5!UBERON:0001802;3.92e-16;5!UBERON:0002420;5.89e-16;9!UBERON:0000125;5.89e-16;9!UBERON:0007245;5.89e-16;9!UBERON:0002308;5.89e-16;9!UBERON:0010009;5.89e-16;9!UBERON:0010011;5.89e-16;9!UBERON:0000454;5.89e-16;9!UBERON:0000970;4.28e-15;20!UBERON:0002104;2.34e-14;21!UBERON:0000020;4.51e-13;23!UBERON:0001032;1.65e-12;24!UBERON:0004456;1.65e-12;24!UBERON:0000019;3.49e-11;19!UBERON:0000047;3.49e-11;19!UBERON:0004088;3.49e-11;19!UBERON:0010230;3.49e-11;19!UBERON:0001874;3.10e-10;1!UBERON:0001456;4.18e-10;21!UBERON:0003296;6.34e-10;4!UBERON:0010133;6.34e-10;4!UBERON:0010077;1.81e-09;4!UBERON:0005389;1.81e-09;4!UBERON:0000484;1.81e-09;4!UBERON:0000965;1.81e-09;4!UBERON:0001803;1.81e-09;4!UBERON:0001264;1.70e-08;10!UBERON:0002075;5.70e-08;18!UBERON:0002780;8.67e-08;41!UBERON:0001890;8.67e-08;41!UBERON:0000013;9.54e-08;5!UBERON:0002410;9.54e-08;5!UBERON:0007625;1.59e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.34e-27,3;UBERON:0005382,1.34e-27,3;UBERON:0000369,7.24e-21,4;UBERON:0002435,7.24e-21,4;UBERON:0000204,7.24e-21,4;UBERON:0010082,7.24e-21,4;UBERON:0009663,1.20e-20,7;UBERON:0001873,4.91e-19,2;UBERON:0010122,4.91e-19,2;UBERON:0000007,6.43e-19,2;UBERON:0003056,2.95e-18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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6496 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10889 | |||
|TSSclassifier=S | |||
|UniProt=O95343 | |||
|association_with_transcript=-3bp_to_NM_005413,uc002run.1_5end | |||
|coexpression_cluster_id=C1905 | |||
|description=CAGE_peak_12_at_SIX3_5end | |||
|id=chr2:45169024..45169033,+ | |||
|ontology_enrichment_celltype=CL:0002586!2.08e-09!3;CL:0000064!2.40e-09!3;CL:0005012!2.40e-09!3;CL:0000067!2.40e-09!3;CL:0002304!2.40e-09!3;CL:0000306!2.21e-07!4;CL:0002222!2.21e-07!4;CL:0002224!2.21e-07!4;CL:0000149!3.83e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.81e-09;4!CL:0002222;1.81e-09;4!CL:0002224;1.81e-09;4!CL:0000333;9.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.15e-09,4;CL:0002222,2.15e-09,4;CL:0002224,2.15e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.36e-19;2!UBERON:0003056;1.45e-12;3 | |||
|ontology_enrichment_disease=DOID:171!9.86e-10!10;DOID:169!5.02e-08!6;DOID:5409!9.92e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p12@SIX3 | |||
}} |
Revision as of 18:45, 12 September 2013
Short description: | p12@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SIX3_5end |
Coexpression cluster: | C1905_caudate_putamen_embryonic_pituitary_globus_cord_rhabdomyosarcoma |
Association with transcript: | -3bp_to_NM_005413, uc002run.1_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | O95343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.15e-09 | 4 |
vertebrate lens cell | 2.15e-09 | 4 |
lens epithelial cell | 2.15e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.