FFCP PHASE1:Hg19::chr16:51185573..51185593,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10524 | |||
|TSSclassifier=weak | |||
|UniProt=Q9NSC2 | |||
|association_with_transcript=-390bp_to_NM_002968,uc010cbv.2,uc010vgs.1_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_3_at_SALL1_5end | |||
|id=chr16:51185573..51185593,- | |||
|ontology_enrichment_celltype=CL:0002319!1.78e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:1000507;9.24e-11;10!CL:1000494;9.24e-11;10!CL:0002322;1.74e-10;5!CL:1000497;5.02e-07;17!CL:0002518;5.02e-07;17!CL:0002605;9.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,7.52e-11,10;CL:1000494,7.52e-11,10;CL:0002322,1.66e-10,5;CL:1000497,4.34e-07,17;CL:0002518,4.34e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.67e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.74e-38!82;UBERON:0005743!1.73e-35!86;UBERON:0001049!4.20e-34!57;UBERON:0005068!4.20e-34!57;UBERON:0006241!4.20e-34!57;UBERON:0007135!4.20e-34!57;UBERON:0000955!2.80e-32!69;UBERON:0006238!2.80e-32!69;UBERON:0000073!3.89e-31!94;UBERON:0001016!3.89e-31!94;UBERON:0003080!1.45e-27!42;UBERON:0002616!4.93e-27!59;UBERON:0002780!4.95e-27!41;UBERON:0001890!4.95e-27!41;UBERON:0006240!4.95e-27!41;UBERON:0003075!3.98e-23!86;UBERON:0007284!3.98e-23!86;UBERON:0002346!4.07e-23!90;UBERON:0001893!5.96e-21!34;UBERON:0002020!8.73e-21!34;UBERON:0003528!8.73e-21!34;UBERON:0002791!3.93e-20!33;UBERON:0003056!3.41e-19!61;UBERON:0001869!5.07e-19!32;UBERON:0007023!5.20e-18!115;UBERON:0000956!2.27e-17!25;UBERON:0000203!2.27e-17!25;UBERON:0000924!1.16e-16!173;UBERON:0006601!1.16e-16!173;UBERON:0004121!2.17e-16!169;UBERON:0000033!5.98e-16!123;UBERON:0000475!3.67e-15!365;UBERON:0000153!4.52e-15!129;UBERON:0007811!4.52e-15!129;UBERON:0000025!7.45e-15!194;UBERON:0002619!1.31e-14!22;UBERON:0000468!3.89e-13!659;UBERON:0000062!5.52e-13!511;UBERON:0001950!5.63e-13!20;UBERON:0000119!5.20e-12!312;UBERON:0000483!1.09e-11!309;UBERON:0004111!8.48e-11!241;UBERON:0000467!2.74e-10!625;UBERON:0000480!3.49e-10!626;UBERON:0000922!6.48e-10!612;UBERON:0000481!4.95e-09!347;UBERON:0000489!1.17e-08!32;UBERON:0003076!8.99e-08!15;UBERON:0003057!8.99e-08!15;UBERON:0001894!1.06e-07!7;UBERON:0006222!1.06e-07!7;UBERON:0000477!1.16e-07!286;UBERON:0002050!2.33e-07!605;UBERON:0005423!2.33e-07!605;UBERON:0000923!3.89e-07!604;UBERON:0005291!3.89e-07!604;UBERON:0006598!3.89e-07!604;UBERON:0002532!3.89e-07!604;UBERON:0002113!7.88e-07!27;UBERON:0003918!7.88e-07!27;UBERON:0005095!7.88e-07!27;UBERON:0007687!7.88e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.07e-27;41!UBERON:0001890;1.07e-27;41!UBERON:0000073;6.23e-23;53!UBERON:0002616;6.23e-23;53!UBERON:0001893;2.93e-22;34!UBERON:0003528;1.42e-21;34!UBERON:0002020;1.42e-21;34!UBERON:0000956;1.46e-21;25!UBERON:0000203;1.46e-21;25!UBERON:0002791;4.80e-21;32!UBERON:0001869;6.73e-21;32!UBERON:0002619;5.04e-17;22!UBERON:0000955;2.61e-15;68!UBERON:0001950;1.91e-14;20!UBERON:0001017;2.37e-14;75!UBERON:0001016;6.37e-13;83!UBERON:0001894;3.11e-12;7!UBERON:0000489;7.78e-11;29!UBERON:0004211;9.24e-11;10!UBERON:0009773;9.24e-11;10!UBERON:0001231;9.24e-11;10!UBERON:0004810;9.24e-11;10!UBERON:0002784;1.82e-08;4!UBERON:0002113;2.13e-08;24!UBERON:0011143;2.13e-08;24!UBERON:0002021;4.10e-08;5!UBERON:0002298;1.02e-07;6!UBERON:0003296;1.43e-07;4!UBERON:0010133;1.43e-07;4!UBERON:0002368;1.73e-07;33!UBERON:0007023;5.54e-07;114!UBERON:0005172;6.05e-07;52!UBERON:0005173;6.05e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.61e-42,56;UBERON:0005068,5.61e-42,56;UBERON:0006241,5.61e-42,56;UBERON:0007135,5.61e-42,56;UBERON:0001017,8.45e-40,81;UBERON:0000073,2.13e-37,53;UBERON:0002616,2.13e-37,53;UBERON:0002780,3.53e-37,41;UBERON:0001890,3.53e-37,41;UBERON:0003080,3.53e-37,41;UBERON:0006240,3.53e-37,41;UBERON:0000955,1.27e-36,68;UBERON:0006238,1.27e-36,68;UBERON:0001016,3.12e-36,89;UBERON:0003075,6.56e-31,82;UBERON:0007284,6.56e-31,82;UBERON:0002346,1.66e-30,86;UBERON:0001893,5.86e-27,34;UBERON:0003056,8.20e-27,61;UBERON:0003528,1.05e-26,34;UBERON:0002020,1.05e-26,34;UBERON:0010371,4.09e-24,104;UBERON:0002791,5.43e-24,32;UBERON:0001869,8.49e-24,32;UBERON:0000956,1.63e-21,25;UBERON:0000203,1.63e-21,25;UBERON:0010314,2.10e-19,132;UBERON:0004121,1.01e-18,171;UBERON:0000924,1.01e-18,171;UBERON:0006601,1.01e-18,171;UBERON:0000025,3.02e-18,192;UBERON:0007023,5.08e-18,114;UBERON:0002619,5.21e-17,22;UBERON:0011216,1.33e-15,223;UBERON:0001950,2.28e-14,20;UBERON:0001894,2.02e-12,7;UBERON:0006222,2.02e-12,7;UBERON:0004111,6.26e-12,240;UBERON:0004810,7.52e-11,10;UBERON:0000483,8.22e-11,306;UBERON:0000119,1.55e-10,309;UBERON:0000489,7.88e-10,31;UBERON:0005172,5.66e-09,54;UBERON:0005173,5.66e-09,54;UBERON:0002784,1.98e-08,4;UBERON:0002368,5.95e-08,35;UBERON:0002021,6.56e-08,5;UBERON:0003296,8.49e-08,4;UBERON:0010133,8.49e-08,4;UBERON:0002298,9.06e-08,6;UBERON:0002417,1.52e-07,60;UBERON:0000916,1.52e-07,60;UBERON:0002113,1.64e-07,26;UBERON:0003918,1.64e-07,26;UBERON:0011143,1.64e-07,26;UBERON:0005095,1.64e-07,26;UBERON:0007687,1.64e-07,26;UBERON:0000922,3.36e-07,592;UBERON:0003076,7.02e-07,15;UBERON:0003057,7.02e-07,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0,0.940364164434263,6.01095572975219,3.14811177667634,4.6450776650077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0.70296429550139,0,0.570471821544449,0.896692083310806,0,0,0,0.408308342509787,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.717558542755448,1.06778694409284,0.423863802319124,0,0.206105058476878,0.257640540045629,0.18611685633159,0.675105328965065,0.194874010322397,0.252433774244115,0.0920498986422993,0,1.42003837006646,1.61203357164224,0.339121184620975,0,0,0,6.95250124938694,7.28913725768169,6.39066685782351,3.52447587052259,5.80337957013945,4.37972830890996,1.56449532329816,0.643240938192885,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,1.96565443335525,4.72631925345123,0,0,0,0,0,0,0,0,0,1.44331342025273,1.62302566965108,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0,0,0,1.06375246633948,2.08014873822732,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0,0,0,0,3.81141936333695,3.90419561572865,0.773288812777695,0.837581326671744,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0.34444334449382,0.364182336013434,0.917870904715969,0.902399225814824,2.31046011313244,4.70609861506113,1.46139224653261,3.9054102690364,0,0,0.863663664408557,0,2.98041081298238,3.51182841698397,2.54876273045038,0,6.26849313222099,0,0,0,0,0,1.64865618636356,2.47237555009527,1.89771849817352,0,0,0,0.193341436584244,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0,0,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0,0,0,0,0,0,1.27281299170375,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0.48763373908959,0,0,1.09199929126389,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,3.09472716103128,0,0,0,0,0,0,1.73856760253663,0,0,0,0,0,0.0986434056369336,0,0,3.87733098438087,1.94813006139888,0,0,0,0.724999575434793,0,0,0,0,0,0,0,1.92954301800653,0,0.995213339381022,0.591095237907095,0,0,0,1.46205491157214,0,0,0,0,0.31900115973192,0.915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0.296521128680622,0.123563938946503,0.104421949505455,7.75113029277786,0,2.34264445725339,0,0,0,0,0,0.91821828489147,0.252746318513952,1.05226393590145,0.414752765588989,0,0,0,0,0.569219092059585,0.277349346026277,1.04135843001079,0,0,0.698906672968121,0,0,0,0,0,0,0.225980740780532,0,0,2.089256266544,0,0,0,0,0,0,0.343189995723929,0,0,0,1.49494626680975,0.418411385249333,1.12198039399954,1.73370353940911,0,2.87501295673185,0,0,0,0,0.229160424011684,1.43574604915363,0,0,0.446342914883745,0.201550417460179,0,1.16495949527454,1.41809728153003,2.39005989305383,2.29172049104229,0,0,1.59045937961861,4.90332262001672,0.803765742325096,1.37539436597234,0.415440338029185,0.2249738915515,0,1.94398581305679,0,10.0871305342974,11.1728272727546,0,0,0,0,0.662091970365432,0,0.542999601753713,0,1.95952416065645,0,0,0,0,8.50002955332878,1.32506888912221,1.55139547633861,4.76037366273684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.732157589411779,3.1297732676625,0,4.10437490686353,4.65723022060376,0.276697269872462,0.124980407962107,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,2.24901556081802,0,0,0,2.08698024724694,0,0,0,0,0,0,1.19428766609585,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,1.53744911152768,0,0,2.76516872303461,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,2.72658681369805,0,0,0,0,0,2.1437183414724,1.92687675289379,1.41696576325585,2.87340946302872,1.02558182120378,1.26035848110859,2.48966108871184,1.61475645631851,4.28308260777463,0,0,0,0,0,0,1.39241355481392,0.451261970095544,1.21023041222112,0,0,0,0,2.43135304626221,0.781078098613847,2.68692835451539,1.71222687523548,1.09394961803644,0,0,0,0,4.28561468702629,27.2389814997247,1.82089681270989,1.82129753081038,0.0887023701626388,0,0,2.58284985311961,1.57854656550838,0,0,0.313972371402056,0.471346769748006,0,0.913158720509496,1.511493138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| |||
|short_description=p3@SALL1 | |||
}} |
Revision as of 03:33, 12 January 2014
Short description: | p3@SALL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SALL1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -390bp_to_NM_002968, uc010cbv.2, uc010vgs.1_5end |
EntrezGene: | SALL1 |
HGNC: | 10524 |
UniProt: | Q9NSC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 7.52e-11 | 10 |
nephron tubule epithelial cell | 7.52e-11 | 10 |
embryonic stem cell | 1.66e-10 | 5 |
kidney cell | 4.34e-07 | 17 |
kidney epithelial cell | 4.34e-07 | 17 |