FFCP PHASE1:Hg19::chr19:13617400..13617427,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=773 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1388 | |||
|TSSclassifier=strong | |||
|UniProt=O00555,Q9NS88,B5TYJ1 | |||
|association_with_transcript=-126bp_to_ENST00000325084,ENST00000360228,NM_000068,NM_001127221,NM_001127222,NM_001174080,NM_023035,uc002mwy.3,uc010dze.2_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_CACNA1A_5end | |||
|id=chr19:13617400..13617427,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.37e-15;82!UBERON:0006215;1.72e-15;3!UBERON:0010122;1.55e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.04e-59!57;UBERON:0005068!9.04e-59!57;UBERON:0006241!9.04e-59!57;UBERON:0007135!9.04e-59!57;UBERON:0002616!9.96e-54!59;UBERON:0000955!3.89e-50!69;UBERON:0006238!3.89e-50!69;UBERON:0001017!1.98e-49!82;UBERON:0005743!3.65e-48!86;UBERON:0000073!1.57e-47!94;UBERON:0001016!1.57e-47!94;UBERON:0002780!4.52e-46!41;UBERON:0001890!4.52e-46!41;UBERON:0006240!4.52e-46!41;UBERON:0001869!2.36e-45!32;UBERON:0002020!4.62e-45!34;UBERON:0003528!4.62e-45!34;UBERON:0001893!5.31e-45!34;UBERON:0003080!1.04e-44!42;UBERON:0002791!2.70e-43!33;UBERON:0003075!5.72e-39!86;UBERON:0007284!5.72e-39!86;UBERON:0002346!3.14e-38!90;UBERON:0002619!1.01e-36!22;UBERON:0000956!3.27e-34!25;UBERON:0000203!3.27e-34!25;UBERON:0001950!1.16e-33!20;UBERON:0003056!6.63e-29!61;UBERON:0007023!1.45e-25!115;UBERON:0000033!6.93e-24!123;UBERON:0000153!4.61e-22!129;UBERON:0007811!4.61e-22!129;UBERON:0000924!8.43e-21!173;UBERON:0006601!8.43e-21!173;UBERON:0004121!9.79e-21!169;UBERON:0004732!1.28e-17!13;UBERON:0004733!4.11e-16!12;UBERON:0002028!4.11e-16!12;UBERON:0007277!4.11e-16!12;UBERON:0002680!5.90e-15!9;UBERON:0001895!5.90e-15!9;UBERON:0010092!5.90e-15!9;UBERON:0003076!1.24e-14!15;UBERON:0003057!1.24e-14!15;UBERON:0002420!2.30e-12!9;UBERON:0007245!2.30e-12!9;UBERON:0010009!2.30e-12!9;UBERON:0010011!2.30e-12!9;UBERON:0000454!2.30e-12!9;UBERON:0002308!4.07e-12!9;UBERON:0000125!4.07e-12!9;UBERON:0000200!6.65e-12!6;UBERON:0000025!1.17e-11!194;UBERON:0001871!1.23e-11!7;UBERON:0002037!1.27e-10!6;UBERON:0006215!1.27e-10!6;UBERON:0002021!2.46e-10!5;UBERON:0001872!4.03e-10!5;UBERON:0000349!1.30e-09!5;UBERON:0000475!1.72e-09!365;UBERON:0009663!3.47e-09!7;UBERON:0000369!4.36e-08!4;UBERON:0002435!4.36e-08!4;UBERON:0000204!4.36e-08!4;UBERON:0010082!4.36e-08!4;UBERON:0000064!1.64e-07!219;UBERON:0004111!3.42e-07!241;UBERON:0002771!6.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.00e-83;20!UBERON:0002619;1.07e-83;22!UBERON:0001869;3.16e-78;32!UBERON:0003528;1.88e-76;34!UBERON:0002020;1.88e-76;34!UBERON:0000956;1.87e-73;25!UBERON:0000203;1.87e-73;25!UBERON:0002791;1.01e-72;32!UBERON:0001893;2.28e-72;34!UBERON:0002780;3.38e-51;41!UBERON:0001890;3.38e-51;41!UBERON:0000073;9.50e-43;53!UBERON:0002616;9.50e-43;53!UBERON:0000955;1.07e-34;68!UBERON:0001017;5.96e-30;75!UBERON:0000200;1.04e-27;6!UBERON:0001016;8.59e-25;83!UBERON:0002021;1.29e-23;5!UBERON:0001871;2.81e-23;6!UBERON:0001872;3.31e-23;5!UBERON:0000369;5.66e-18;4!UBERON:0002435;5.66e-18;4!UBERON:0000204;5.66e-18;4!UBERON:0002420;3.71e-17;9!UBERON:0007245;3.71e-17;9!UBERON:0010009;3.71e-17;9!UBERON:0010011;3.71e-17;9!UBERON:0000454;3.71e-17;9!UBERON:0000125;5.34e-17;9!UBERON:0002308;5.34e-17;9!UBERON:0000349;2.07e-14;5!UBERON:0001870;2.21e-14;3!UBERON:0005383;1.09e-13;3!UBERON:0005382;1.09e-13;3!UBERON:0007023;2.69e-13;114!UBERON:0002680;8.40e-13;9!UBERON:0001895;8.40e-13;9!UBERON:0004732;3.36e-12;13!UBERON:0002771;1.21e-10;2!UBERON:0009663;2.50e-10;7!UBERON:0002702;4.42e-10;2!UBERON:0011216;8.36e-10;132!UBERON:0001876;8.90e-10;2!UBERON:0001873;1.55e-09;2!UBERON:0002148;1.55e-09;2!UBERON:0006331;1.55e-09;2!UBERON:0009662;1.55e-09;2!UBERON:0004733;1.59e-09;12!UBERON:0002028;1.59e-09;12!UBERON:0002037;5.99e-08;6!UBERON:0010314;1.22e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,7.75e-89,34;UBERON:0002020,7.75e-89,34;UBERON:0001869,3.22e-88,32;UBERON:0002619,6.25e-84,22;UBERON:0001950,6.70e-84,20;UBERON:0001893,7.96e-83,34;UBERON:0002791,2.74e-81,32;UBERON:0000073,5.81e-80,53;UBERON:0002616,5.81e-80,53;UBERON:0001049,2.24e-75,56;UBERON:0005068,2.24e-75,56;UBERON:0006241,2.24e-75,56;UBERON:0007135,2.24e-75,56;UBERON:0000956,1.17e-73,25;UBERON:0000203,1.17e-73,25;UBERON:0002780,2.42e-73,41;UBERON:0001890,2.42e-73,41;UBERON:0003080,2.42e-73,41;UBERON:0006240,2.42e-73,41;UBERON:0000955,8.55e-73,68;UBERON:0006238,8.55e-73,68;UBERON:0001017,5.97e-64,81;UBERON:0001016,2.46e-60,89;UBERON:0003075,8.11e-53,82;UBERON:0007284,8.11e-53,82;UBERON:0003056,2.40e-51,61;UBERON:0002346,4.74e-50,86;UBERON:0010371,3.32e-40,104;UBERON:0007023,2.37e-36,114;UBERON:0010314,2.13e-32,132;UBERON:0004121,3.42e-28,171;UBERON:0000924,3.42e-28,171;UBERON:0006601,3.42e-28,171;UBERON:0000200,1.15e-27,6;UBERON:0002021,1.08e-23,5;UBERON:0001871,2.15e-23,6;UBERON:0001872,3.72e-23,5;UBERON:0011216,1.24e-22,223;UBERON:0000025,1.72e-18,192;UBERON:0000369,5.08e-18,4;UBERON:0002435,5.08e-18,4;UBERON:0000204,5.08e-18,4;UBERON:0010082,5.08e-18,4;UBERON:0002420,2.48e-17,9;UBERON:0007245,2.48e-17,9;UBERON:0010009,2.48e-17,9;UBERON:0010011,2.48e-17,9;UBERON:0000454,2.48e-17,9;UBERON:0000125,7.45e-17,9;UBERON:0002308,7.45e-17,9;UBERON:0000349,1.24e-14,5;UBERON:0001870,2.27e-14,3;UBERON:0005383,9.55e-14,3;UBERON:0005382,9.55e-14,3;UBERON:0004111,2.42e-13,240;UBERON:0002680,1.17e-12,9;UBERON:0001895,1.17e-12,9;UBERON:0010092,1.17e-12,9;UBERON:0004732,4.64e-12,13;UBERON:0002771,1.33e-10,2;UBERON:0009663,2.36e-10,7;UBERON:0002702,3.86e-10,2;UBERON:0001876,5.31e-10,2;UBERON:0000483,1.02e-09,306;UBERON:0001873,1.30e-09,2;UBERON:0010122,1.30e-09,2;UBERON:0000119,1.49e-09,309;UBERON:0004733,2.03e-09,12;UBERON:0002028,2.03e-09,12;UBERON:0007277,2.03e-09,12;UBERON:0002148,2.87e-09,2;UBERON:0006331,2.87e-09,2;UBERON:0009662,2.87e-09,2;UBERON:0002037,5.93e-08,6;UBERON:0006215,5.93e-08,6;UBERON:0003076,1.79e-07,15;UBERON:0003057,1.79e-07,15 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0.123121058076788,0.612002073732759,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,0.144846518960824,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0,0.211931901159562,1.50045548042201,0.103052529238439,0.257640540045629,0,0.675105328965065,0.0974370051611986,1.26216887122057,0.0920498986422993,0,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,2.95405774462077,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.59750674853184,3.99227596002388,0,0,0,0,0,0,0,0,0,1.77148277162768,1.4471572635049,7.62908681585416,26.4284431235627,13.2996428529096,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,1.40558667435203,0,0,0,0,0,2.14250933141343,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,3.22885059374981,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0,0,0,3.76647251279753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,4.51497180137264,4.13130071331449,0,0.998361463831671,0.745156835296601,0,0,0,0,0,0,0.28984205722165,0.149254802886874,0,0,0.189403005275089,0.50313580350515,0,0,0.604923695052956,0,0,0,0.449803112163605,0.621051827505038,0.414706207840855,0,0,0.450772826991655,0,0,0,0.214821114084977,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00949464840019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,3.59683660540173,7.08482881627925,4.78901577171454,3.69209455633359,2.7727886584389,4.42606415770994,3.87541549516443,1.42769420259154,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,3.30934164630134,2.34323429584154,4.96048311602842,2.47321659756237,3.28184885410932,0,0,0.351742488719241,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.543757863814654,4.34100305514804,0,0,0,2.35673384874003,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0.235676547101626,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48743835260037,1.74540276136151,0,0.371995018166751,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@CACNA1A | |||
}} |
Revision as of 21:40, 20 January 2014
Short description: | p3@CACNA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CACNA1A_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -126bp_to_ENST00000325084, ENST00000360228, NM_000068, NM_001127221, NM_001127222, NM_001174080, NM_023035, uc002mwy.3, uc010dze.2_5end |
EntrezGene: | CACNA1A |
HGNC: | 1388 |
UniProt: | O00555Q9NS88B5TYJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data