FFCP PHASE1:Mm9::chr15:25682615..25682652,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=17909|HGNC=|MCL_coexpression_id=204|UniProt=E9Q5G1,Q80TR9|association_with_transcript=-12bp_to_ENSMUST00000022882,uc007vjd.1,uc007vje.1_5end|description=CAGE_peak_6_at_Myo10_5end|id=chr15:25682615..25682652,+|ontology_enrichment_celltype=CL:0000117!2.90e-18!23;CL:0000337!2.90e-18!23;CL:0000221!5.87e-17!44;CL:0000133!5.87e-17!44;CL:0002319!2.61e-16!43;CL:0000055!3.71e-12!50;CL:0000540!5.62e-11!33;CL:0000047!5.62e-11!33;CL:0000031!5.62e-11!33;CL:0000404!5.62e-11!33;CL:0000393!6.78e-08!39;CL:0000211!6.78e-08!39;CL:0002453!9.90e-07!8|ontology_enrichment_celltype_v019_2=CL:0000117,5.91e-33,23;CL:0000337,5.91e-33,23;CL:0000221,8.16e-33,44;CL:0000133,8.16e-33,44;CL:0002319,1.44e-31,43;CL:0000540,5.72e-23,33;CL:0000047,5.72e-23,33;CL:0000031,5.72e-23,33;CL:0000404,5.72e-23,33;CL:0000393,2.11e-18,39;CL:0000211,2.11e-18,39;CL:0002321,2.76e-17,70;CL:0002453,7.32e-12,8;CL:0000333,3.51e-09,10;CL:0000095,3.51e-09,10;CL:0000243,3.51e-09,10;CL:0000123,3.51e-09,10;CL:0000125,3.51e-09,10;CL:0000030,3.51e-09,10;CL:0000339,3.51e-09,10;CL:0002609,1.07e-08,6;CL:0000128,2.00e-08,6;CL:0000126,2.00e-08,6;CL:0000127,2.00e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.81e-33!75;UBERON:0001016!1.81e-33!75;UBERON:0001017!3.46e-33!73;UBERON:0005743!3.46e-33!73;UBERON:0001049!2.29e-30!52;UBERON:0005068!2.29e-30!52;UBERON:0006241!2.29e-30!52;UBERON:0007135!2.29e-30!52;UBERON:0000955!8.18e-29!50;UBERON:0006238!8.18e-29!50;UBERON:0002616!5.58e-28!49;UBERON:0004121!4.97e-25!102;UBERON:0000924!4.97e-25!102;UBERON:0006601!4.97e-25!102;UBERON:0000033!2.57e-24!63;UBERON:0002020!5.28e-24!34;UBERON:0003080!3.91e-23!40;UBERON:0002780!2.50e-22!39;UBERON:0001890!2.50e-22!39;UBERON:0006240!2.50e-22!39;UBERON:0002346!5.96e-21!71;UBERON:0003075!5.96e-21!71;UBERON:0007284!5.96e-21!71;UBERON:0002791!3.89e-20!29;UBERON:0003528!3.89e-20!29;UBERON:0001893!3.89e-20!29;UBERON:0003056!8.42e-19!49;UBERON:0007811!9.74e-14!86;UBERON:0000956!1.81e-13!21;UBERON:0001869!1.81e-13!21;UBERON:0000203!1.81e-13!21;UBERON:0000153!1.31e-11!94;UBERON:0002619!4.38e-11!17;UBERON:0002420!5.94e-08!8;UBERON:0007245!5.94e-08!8;UBERON:0010009!5.94e-08!8;UBERON:0010011!5.94e-08!8;UBERON:0000454!5.94e-08!8;UBERON:0003076!1.37e-07!12;UBERON:0003057!1.37e-07!12;UBERON:0001954!7.74e-07!7;UBERON:0003022!7.74e-07!7;UBERON:0002421!7.74e-07!7;UBERON:0000349!7.74e-07!7;UBERON:0002600!7.74e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.17e-55,73;UBERON:0001016,2.60e-53,75;UBERON:0000073,1.14e-47,54;UBERON:0001049,1.45e-44,52;UBERON:0005068,1.45e-44,52;UBERON:0006241,1.45e-44,52;UBERON:0007135,1.45e-44,52;UBERON:0002020,5.94e-42,34;UBERON:0004121,2.55e-41,95;UBERON:0000924,2.55e-41,95;UBERON:0006601,2.55e-41,95;UBERON:0000955,3.61e-37,47;UBERON:0006238,3.61e-37,47;UBERON:0002616,1.00e-35,46;UBERON:0003528,1.08e-34,29;UBERON:0002791,1.08e-34,29;UBERON:0001893,1.08e-34,29;UBERON:0003080,2.98e-34,40;UBERON:0002346,3.52e-34,64;UBERON:0003075,3.52e-34,64;UBERON:0007284,3.52e-34,64;UBERON:0002780,8.31e-33,39;UBERON:0001890,8.31e-33,39;UBERON:0006240,8.31e-33,39;UBERON:0010371,4.84e-32,73;UBERON:0003056,2.47e-26,49;UBERON:0010314,3.88e-23,92;UBERON:0000956,2.98e-22,21;UBERON:0001869,2.98e-22,21;UBERON:0000203,2.98e-22,21;UBERON:0002619,8.56e-18,17;UBERON:0004111,9.30e-16,122;UBERON:0000025,1.57e-15,114;UBERON:0011216,7.47e-14,194;UBERON:0002420,1.48e-13,8;UBERON:0007245,1.48e-13,8;UBERON:0010009,1.48e-13,8;UBERON:0010011,1.48e-13,8;UBERON:0000454,1.48e-13,8;UBERON:0001954,1.79e-11,7;UBERON:0003022,1.79e-11,7;UBERON:0002421,1.79e-11,7;UBERON:0000349,1.79e-11,7;UBERON:0002600,1.79e-11,7;UBERON:0003076,4.48e-10,12;UBERON:0003057,4.48e-10,12;UBERON:0002240,1.06e-09,6;UBERON:0005174,1.06e-09,6;UBERON:0001137,1.06e-09,6;UBERON:0000369,7.90e-09,5;UBERON:0002435,7.90e-09,5;UBERON:0000204,7.90e-09,5;UBERON:0010082,7.90e-09,5;UBERON:0002021,2.79e-08,10;UBERON:0000411,2.79e-08,10;UBERON:0001950,2.79e-08,10;UBERON:0001948,3.74e-08,5;UBERON:0002315,3.74e-08,5;UBERON:0002950,1.12e-07,4;UBERON:0001891,1.12e-07,4;UBERON:0009616,1.12e-07,4;UBERON:0010286,1.12e-07,4;UBERON:0000483,3.50e-07,174;UBERON:0000119,5.51e-07,176|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8634842264463,5.4921545683618,4.6663175777828,8.25919887589639,10.062679505548,0,0,0,0,0,0,1.41621522601718,2.64495489636016,3.1691570175309,0,0.889294796111139,0,0,0,7.78960287347852,29.9690278150813,1.34796496001021,1.62007125998029,1.47227472945967,3.42781181284564,2.87129103237098,2.44981598429908,4.69642807989358,2.75765635983006,3.30347642998166,3.44755812830007,3.5329502648936,2.50583946687368,3.7509933876988,4.16730696445408,4.4669279840221,4.50210088025344,3.66715794664344,3.53554302568401,2.27794689278565,2.05039390407831,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,2.11265129665021,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,3.14560342750128,4.57500602818627,2.51308704225729,2.78118912307642,1.27857728665165,4.57133698031032,3.89379031362618,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.281105173679186,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.74937841044784,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,3.37156238974363,2.34423373184406,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,1.13552068166615,0.178065603667255,0.162886959353576,2.14461159864296,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,1.44048875225048,1.68166288917581,0.643011105094777,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,0,1.3748254587495,4.11049511862385,2.2661816921691,0.675022500231806,1.80128481289688,1.81256963593682,2.07104124700728,0.830298780673413,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.384150914429216,0.34461281373368,0.476293691283074,0.463537303779422,0.964546102318525,0.412085900803307,0,0.342869252385415,0.177475806159338,0.715308569841963,0.581385666529314,0.282328141245992,0.846146078916765,0.548783918618318,0.526139422875686,0.543216455383447,0,0.593175090620871,0.591026894253381,0.409231043169689,0.464810523557898,0.385813221962283,0.499621155875892,0.233931608445408,0,0.191288332068843,0,0.695603506861264|short_description=p6@Myo10}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17909 | |||
|HGNC= | |||
|MCL_coexpression_id=204 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q5G1,uniprot:Q80TR9 | |||
|association_with_transcript=-12bp_to_ENSMUST00000022882,uc007vjd.1,uc007vje.1_5end | |||
|cluster_id=chr15:25682615..25682652,+ | |||
|description=CAGE_peak_6_at_Myo10_5end | |||
|id=chr15:25682615..25682652,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.90e-18!23;CL:0000337!2.90e-18!23;CL:0000221!5.87e-17!44;CL:0000133!5.87e-17!44;CL:0002319!2.61e-16!43;CL:0000055!3.71e-12!50;CL:0000540!5.62e-11!33;CL:0000047!5.62e-11!33;CL:0000031!5.62e-11!33;CL:0000404!5.62e-11!33;CL:0000393!6.78e-08!39;CL:0000211!6.78e-08!39;CL:0002453!9.90e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.91e-33,23;CL:0000337,5.91e-33,23;CL:0000221,8.16e-33,44;CL:0000133,8.16e-33,44;CL:0002319,1.44e-31,43;CL:0000540,5.72e-23,33;CL:0000047,5.72e-23,33;CL:0000031,5.72e-23,33;CL:0000404,5.72e-23,33;CL:0000393,2.11e-18,39;CL:0000211,2.11e-18,39;CL:0002321,2.76e-17,70;CL:0002453,7.32e-12,8;CL:0000333,3.51e-09,10;CL:0000095,3.51e-09,10;CL:0000243,3.51e-09,10;CL:0000123,3.51e-09,10;CL:0000125,3.51e-09,10;CL:0000030,3.51e-09,10;CL:0000339,3.51e-09,10;CL:0002609,1.07e-08,6;CL:0000128,2.00e-08,6;CL:0000126,2.00e-08,6;CL:0000127,2.00e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.81e-33!75;UBERON:0001016!1.81e-33!75;UBERON:0001017!3.46e-33!73;UBERON:0005743!3.46e-33!73;UBERON:0001049!2.29e-30!52;UBERON:0005068!2.29e-30!52;UBERON:0006241!2.29e-30!52;UBERON:0007135!2.29e-30!52;UBERON:0000955!8.18e-29!50;UBERON:0006238!8.18e-29!50;UBERON:0002616!5.58e-28!49;UBERON:0004121!4.97e-25!102;UBERON:0000924!4.97e-25!102;UBERON:0006601!4.97e-25!102;UBERON:0000033!2.57e-24!63;UBERON:0002020!5.28e-24!34;UBERON:0003080!3.91e-23!40;UBERON:0002780!2.50e-22!39;UBERON:0001890!2.50e-22!39;UBERON:0006240!2.50e-22!39;UBERON:0002346!5.96e-21!71;UBERON:0003075!5.96e-21!71;UBERON:0007284!5.96e-21!71;UBERON:0002791!3.89e-20!29;UBERON:0003528!3.89e-20!29;UBERON:0001893!3.89e-20!29;UBERON:0003056!8.42e-19!49;UBERON:0007811!9.74e-14!86;UBERON:0000956!1.81e-13!21;UBERON:0001869!1.81e-13!21;UBERON:0000203!1.81e-13!21;UBERON:0000153!1.31e-11!94;UBERON:0002619!4.38e-11!17;UBERON:0002420!5.94e-08!8;UBERON:0007245!5.94e-08!8;UBERON:0010009!5.94e-08!8;UBERON:0010011!5.94e-08!8;UBERON:0000454!5.94e-08!8;UBERON:0003076!1.37e-07!12;UBERON:0003057!1.37e-07!12;UBERON:0001954!7.74e-07!7;UBERON:0003022!7.74e-07!7;UBERON:0002421!7.74e-07!7;UBERON:0000349!7.74e-07!7;UBERON:0002600!7.74e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.17e-55,73;UBERON:0001016,2.60e-53,75;UBERON:0000073,1.14e-47,54;UBERON:0001049,1.45e-44,52;UBERON:0005068,1.45e-44,52;UBERON:0006241,1.45e-44,52;UBERON:0007135,1.45e-44,52;UBERON:0002020,5.94e-42,34;UBERON:0004121,2.55e-41,95;UBERON:0000924,2.55e-41,95;UBERON:0006601,2.55e-41,95;UBERON:0000955,3.61e-37,47;UBERON:0006238,3.61e-37,47;UBERON:0002616,1.00e-35,46;UBERON:0003528,1.08e-34,29;UBERON:0002791,1.08e-34,29;UBERON:0001893,1.08e-34,29;UBERON:0003080,2.98e-34,40;UBERON:0002346,3.52e-34,64;UBERON:0003075,3.52e-34,64;UBERON:0007284,3.52e-34,64;UBERON:0002780,8.31e-33,39;UBERON:0001890,8.31e-33,39;UBERON:0006240,8.31e-33,39;UBERON:0010371,4.84e-32,73;UBERON:0003056,2.47e-26,49;UBERON:0010314,3.88e-23,92;UBERON:0000956,2.98e-22,21;UBERON:0001869,2.98e-22,21;UBERON:0000203,2.98e-22,21;UBERON:0002619,8.56e-18,17;UBERON:0004111,9.30e-16,122;UBERON:0000025,1.57e-15,114;UBERON:0011216,7.47e-14,194;UBERON:0002420,1.48e-13,8;UBERON:0007245,1.48e-13,8;UBERON:0010009,1.48e-13,8;UBERON:0010011,1.48e-13,8;UBERON:0000454,1.48e-13,8;UBERON:0001954,1.79e-11,7;UBERON:0003022,1.79e-11,7;UBERON:0002421,1.79e-11,7;UBERON:0000349,1.79e-11,7;UBERON:0002600,1.79e-11,7;UBERON:0003076,4.48e-10,12;UBERON:0003057,4.48e-10,12;UBERON:0002240,1.06e-09,6;UBERON:0005174,1.06e-09,6;UBERON:0001137,1.06e-09,6;UBERON:0000369,7.90e-09,5;UBERON:0002435,7.90e-09,5;UBERON:0000204,7.90e-09,5;UBERON:0010082,7.90e-09,5;UBERON:0002021,2.79e-08,10;UBERON:0000411,2.79e-08,10;UBERON:0001950,2.79e-08,10;UBERON:0001948,3.74e-08,5;UBERON:0002315,3.74e-08,5;UBERON:0002950,1.12e-07,4;UBERON:0001891,1.12e-07,4;UBERON:0009616,1.12e-07,4;UBERON:0010286,1.12e-07,4;UBERON:0000483,3.50e-07,174;UBERON:0000119,5.51e-07,176 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8634842264463,5.4921545683618,4.6663175777828,8.25919887589639,10.062679505548,0,0,0,0,0,0,1.41621522601718,2.64495489636016,3.1691570175309,0,0.889294796111139,0,0,0,7.78960287347852,29.9690278150813,1.34796496001021,1.62007125998029,1.47227472945967,3.42781181284564,2.87129103237098,2.44981598429908,4.69642807989358,2.75765635983006,3.30347642998166,3.44755812830007,3.5329502648936,2.50583946687368,3.7509933876988,4.16730696445408,4.4669279840221,4.50210088025344,3.66715794664344,3.53554302568401,2.27794689278565,2.05039390407831,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,2.11265129665021,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,3.14560342750128,4.57500602818627,2.51308704225729,2.78118912307642,1.27857728665165,4.57133698031032,3.89379031362618,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.281105173679186,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.74937841044784,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,3.37156238974363,2.34423373184406,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,1.13552068166615,0.178065603667255,0.162886959353576,2.14461159864296,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,1.44048875225048,1.68166288917581,0.643011105094777,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,0,1.3748254587495,4.11049511862385,2.2661816921691,0.675022500231806,1.80128481289688,1.81256963593682,2.07104124700728,0.830298780673413,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.384150914429216,0.34461281373368,0.476293691283074,0.463537303779422,0.964546102318525,0.412085900803307,0,0.342869252385415,0.177475806159338,0.715308569841963,0.581385666529314,0.282328141245992,0.846146078916765,0.548783918618318,0.526139422875686,0.543216455383447,0,0.593175090620871,0.591026894253381,0.409231043169689,0.464810523557898,0.385813221962283,0.499621155875892,0.233931608445408,0,0.191288332068843,0,0.695603506861264 | |||
|short_description=p6@Myo10 | |||
}} |
Revision as of 03:07, 5 August 2015
Short description: | p6@Myo10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Myo10_5end |
Coexpression cluster: | MCL_coexpression_mm9:204 |
Association with transcript: | -12bp_to_ENSMUST00000022882, uc007vjd.1, uc007vje.1_5end |
EntrezGene: | 17909 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.91e-33 | 23 |
neuroblast (sensu Vertebrata) | 5.91e-33 | 23 |
ectodermal cell | 8.16e-33 | 44 |
neurectodermal cell | 8.16e-33 | 44 |
neural cell | 1.44e-31 | 43 |
neuron | 5.72e-23 | 33 |
neuronal stem cell | 5.72e-23 | 33 |
neuroblast | 5.72e-23 | 33 |
electrically signaling cell | 5.72e-23 | 33 |
electrically responsive cell | 2.11e-18 | 39 |
electrically active cell | 2.11e-18 | 39 |
embryonic cell | 2.76e-17 | 70 |
oligodendrocyte precursor cell | 7.32e-12 | 8 |
migratory neural crest cell | 3.51e-09 | 10 |
neuron associated cell | 3.51e-09 | 10 |
glial cell (sensu Vertebrata) | 3.51e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 3.51e-09 | 10 |
glial cell | 3.51e-09 | 10 |
glioblast | 3.51e-09 | 10 |
glioblast (sensu Vertebrata) | 3.51e-09 | 10 |
neuron of cerebral cortex | 1.07e-08 | 6 |
oligodendrocyte | 2.00e-08 | 6 |
macroglial cell | 2.00e-08 | 6 |
astrocyte | 2.00e-08 | 6 |