FFCP PHASE1:Hg19::chr8:16050142..16050168,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7376 | |||
|TSSclassifier=weak | |||
|UniProt=E5RFI4,F5GZJ2 | |||
|association_with_transcript=0bp_to_ENST00000381998,ENST00000519060,ENST00000536385_5end | |||
|coexpression_cluster_id=C602 | |||
|description=CAGE_peak_1_at_MSR1_5end | |||
|id=chr8:16050142..16050168,- | |||
|ontology_enrichment_celltype=CL:0002194!1.45e-42!63;CL:0000576!1.45e-42!63;CL:0000040!1.45e-42!63;CL:0000559!1.45e-42!63;CL:0002009!1.03e-41!65;CL:0002057!1.64e-38!42;CL:0000557!2.94e-37!71;CL:0000839!4.99e-37!70;CL:0000766!2.13e-36!76;CL:0000860!1.15e-34!45;CL:0002087!1.12e-20!119;CL:0000763!8.00e-20!112;CL:0000049!8.00e-20!112;CL:0000738!2.09e-18!140;CL:0002031!1.38e-17!124;CL:0000037!2.48e-12!172;CL:0000566!2.48e-12!172;CL:0002032!9.04e-11!165;CL:0000837!9.04e-11!165;CL:0000988!2.06e-10!182;CL:0002393!1.06e-07!9;CL:0002397!1.06e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.24e-34;39!CL:0000234;1.24e-34;39!CL:0000860;4.30e-34;33!CL:0002057;4.30e-34;33!CL:0000576;4.97e-27;48!CL:0000766;1.05e-18;69!CL:0000235;8.02e-09;6!CL:0000763;5.85e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.47e-50,48;CL:0000234,1.47e-50,48;CL:0002194,5.36e-49,59;CL:0000576,5.36e-49,59;CL:0000040,5.36e-49,59;CL:0000559,5.36e-49,59;CL:0002009,1.06e-46,61;CL:0000860,5.16e-43,42;CL:0002057,5.16e-43,42;CL:0000839,1.39e-41,66;CL:0000766,4.63e-41,72;CL:0000557,1.18e-40,67;CL:0000763,2.38e-21,108;CL:0000049,2.38e-21,108;CL:0002087,1.23e-19,115;CL:0000738,8.48e-16,136;CL:0002031,1.51e-15,120;CL:0000037,8.39e-10,168;CL:0002032,2.44e-09,161;CL:0000837,2.44e-09,161;CL:0000235,7.94e-09,6;CL:0000988,1.87e-08,177;CL:0002393,2.41e-07,9;CL:0002397,2.41e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-31;42!CL:0000049;5.00e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.99e-52!115;UBERON:0002390!1.64e-33!102;UBERON:0003061!1.64e-33!102;UBERON:0002371!1.65e-32!80;UBERON:0002193!4.06e-30!112;UBERON:0001474!1.48e-28!86;UBERON:0002405!9.66e-25!115;UBERON:0004765!2.40e-22!101;UBERON:0001434!2.40e-22!101;UBERON:0001049!6.34e-19!57;UBERON:0005068!6.34e-19!57;UBERON:0006241!6.34e-19!57;UBERON:0007135!6.34e-19!57;UBERON:0003081!1.50e-18!216;UBERON:0003080!2.34e-15!42;UBERON:0002780!1.03e-14!41;UBERON:0001890!1.03e-14!41;UBERON:0006240!1.03e-14!41;UBERON:0002204!1.47e-14!167;UBERON:0002616!1.74e-14!59;UBERON:0003075!5.94e-13!86;UBERON:0007284!5.94e-13!86;UBERON:0001017!6.92e-13!82;UBERON:0005743!2.10e-12!86;UBERON:0000062!3.44e-12!511;UBERON:0000467!3.79e-12!625;UBERON:0000480!4.93e-12!626;UBERON:0002346!1.10e-11!90;UBERON:0000922!1.59e-11!612;UBERON:0002050!1.71e-11!605;UBERON:0005423!1.71e-11!605;UBERON:0002020!2.00e-11!34;UBERON:0003528!2.00e-11!34;UBERON:0000073!2.22e-11!94;UBERON:0001016!2.22e-11!94;UBERON:0000923!3.79e-11!604;UBERON:0005291!3.79e-11!604;UBERON:0006598!3.79e-11!604;UBERON:0002532!3.79e-11!604;UBERON:0000468!3.98e-11!659;UBERON:0000955!5.66e-11!69;UBERON:0006238!5.66e-11!69;UBERON:0001893!6.00e-11!34;UBERON:0002791!1.29e-10!33;UBERON:0001869!5.15e-10!32;UBERON:0000479!2.17e-09!787;UBERON:0003056!1.23e-08!61;UBERON:0002619!3.09e-08!22;UBERON:0001950!2.65e-07!20;UBERON:0002308!5.72e-07!9;UBERON:0000125!5.72e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.49e-11;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.62e-44,114;UBERON:0002371,1.09e-34,76;UBERON:0002390,1.43e-34,98;UBERON:0003061,1.43e-34,98;UBERON:0002405,9.90e-32,93;UBERON:0002193,2.06e-31,108;UBERON:0001474,1.19e-30,82;UBERON:0004765,3.81e-26,90;UBERON:0003081,1.35e-22,203;UBERON:0001434,1.39e-21,100;UBERON:0002050,3.52e-15,564;UBERON:0000923,4.29e-15,560;UBERON:0010316,4.29e-15,560;UBERON:0005291,4.29e-15,560;UBERON:0006598,4.29e-15,560;UBERON:0010317,4.29e-15,560;UBERON:0002532,4.29e-15,560;UBERON:0002204,1.44e-14,167;UBERON:0005423,2.05e-14,581;UBERON:0000922,9.10e-14,592;UBERON:0001049,2.40e-12,56;UBERON:0005068,2.40e-12,56;UBERON:0006241,2.40e-12,56;UBERON:0007135,2.40e-12,56;UBERON:0000926,3.82e-11,315;UBERON:0004120,3.82e-11,315;UBERON:0006603,3.82e-11,315;UBERON:0000073,1.32e-10,53;UBERON:0002616,1.32e-10,53;UBERON:0000479,6.98e-09,773;UBERON:0002780,7.88e-09,41;UBERON:0001890,7.88e-09,41;UBERON:0003080,7.88e-09,41;UBERON:0006240,7.88e-09,41;UBERON:0001017,1.55e-08,81;UBERON:0001016,4.86e-08,89;UBERON:0003075,5.42e-08,82;UBERON:0007284,5.42e-08,82;UBERON:0002346,3.56e-07,86;UBERON:0000955,7.42e-07,68;UBERON:0006238,7.42e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36162573225888,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,4.60595277716655,4.4896675761662,0,0,0,0,0,0.293600439334847,0.553995408531877,4.41197784434312,2.60413044859022,8.73270349535705,16.518576966968,12.6212028140751,40.8569050970577,71.0406774134962,23.0454858128425,47.6479525656653,91.2792711408453,39.3327091036782,172.61543539329,303.806597943513,172.632027818667,65.1569336592209,98.7591565883254,21.6682378550947,47.0605848856512,95.2442463701882,35.9557575112135,88.7643287875618,137.99948164272,37.0815532963444,103.243456958442,260.30007319623,93.34322036666,53.9789183849166,61.2776042666431,19.9303119678584,177.130309006004,244.054005820654,181.135496484067,42.3779651843358,83.5990233691772,36.3931745557017,50.0675028559302,14.669696697588,23.0624510059213,12.3561494261145,1.20141514273205,5.78612112109488,20.8059302931111,6.76316702476906,23.0156833743439,0,0,0.889509253863555,0,0,0,0.661044872784862,0,0,0,0,0,2.80254281490768,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.511946444617674,0,1.18388626022008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,16.7653216637072,0,0,49.3312038355119,54.6767375119699,49.8592351945744,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4826786753885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7595810334868,8.86184860022106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,203.621464034278,235.642294995212,172.858041741791,0,0,0,0,0,0,0,0,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.0281281270071,238.57211843026,227.700654641674,0,0,0,0,0,0,0,0,0,0.256686072559497,0,1.30139853857622,0,3.85287410269002,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23688091430106,7.76571122947021,3.20182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9173253644876,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0.464845549297286,5.03699754929024,8.3644472419272,2.15623506123262,7.98459045475533,6.95946393660058,5.37440235401368,0,0,0,0,0,0,0,0,0,0,0,5.86329196562617,0,0,0,29.4893322453854,0,0,0,0,0,0,1.31535265576129,0,0,0,1.239293992399,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,19.6760543623468,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,2.1440859791201,2.46817363851717,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,138.303721232668,0,0,0,0.47748896947538,0.593929361665277,0,1.9882952955326,2.95405774462077,0,0,0,14.345855154077,2.21027132424918,0,0,0,0,0,0,0,21.8001926457623,0,0,0,4.91670920257812,0,0,0,7.97499532978273,0,0,0,0,0,0,7.08593108651071,3.37670028151142,0,1.3269511191747,0.591095237907095,7.45910350323507,0,0,7.07942378234933,0,0,0,0,4.14701507651495,4.39668448328939,10.1276607443541,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89213283814692,3.66618086960175,0,0,0,1.7524294574976,2.40773294189637,0.468528891450678,0,0,0,1.18375320854817,2.41981432097328,0.61214552326098,139.263221501187,0,0,0,0,0,0,0,0.138674673013139,0,0,0,11.706686772216,0,0,0,0,3.78257164304836,0,4.06765333404958,0,0,0.886351143382302,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,11.407985485486,6.16074205013969,0,0,0,14.243402464885,4.35404805622199,7.17873024576814,2.59582700648688,3.004582336956,12.274430159303,7.25581502856644,0.720599767084807,0,0,0,0,0,0.169346664131569,4.77137813885582,1.90684768556206,0,0,0,0.2249738915515,0,0.485996453264197,0,15.9975585817372,2.36045646607491,0,0,0,19.2967738120809,16.5522992591358,0,0,0,0,0,0,0,0,16.8535068729795,3.97520666736664,10.342636508924,5.15707146796491,0,0,70.4796922946785,3.61569901729232,193.035399791793,12.9003165671107,0,0,0,2.72008901684737,4.0110383043632,4.59518365145192,1.96723578425883,0,1.77213635993397,5.00307686098049,3.254964198369,20.6427310448426,6.10109783452688,3.78788057942439,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97492088916001,0,0,1.62640664988597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0.106691729694141,2.41100971525142,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,1.41696576325585,2.23487402680012,0.41023272848151,0,0.691572524642179,0.645902582527404,0,0,0,0,0,0,0,0,11.8832318791826,0,0.781514011233092,0,0,0,1.01306376927592,1.56215619722769,3.72036233702131,0.951237152908602,0,0,2.48105589194647,0,0,10.7140367175657,6.05310699993883,11.532346480496,5.00856820972855,13.8375697453717,0,0,1.56330385846713,0.460409414939944,0,0,4.63109247818033,6.75597036638808,0,1.82631744101899,0,0,8.86309147790539,0,0,0,0,0,0,0,2.15113679410139,21.6547561336935,21.1329243802711,3.81048345171836,0,0,0,0,0,0,1.29485767437579,5.44112876338109,0,3.39997695141398,0,0,0,0,0,0,4.630449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| |||
|short_description=p1@MSR1 | |||
}} |
Revision as of 20:47, 22 January 2014
Short description: | p1@MSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MSR1_5end |
Coexpression cluster: | C602_Macrophage_Monocytederived_CD14_Mast_Dendritic_lung_adipose |
Association with transcript: | 0bp_to_ENST00000381998, ENST00000519060, ENST00000536385_5end |
EntrezGene: | MSR1 |
HGNC: | 7376 |
UniProt: | E5RFI4F5GZJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.47e-50 | 48 |
phagocyte | 1.47e-50 | 48 |
monopoietic cell | 5.36e-49 | 59 |
monocyte | 5.36e-49 | 59 |
monoblast | 5.36e-49 | 59 |
promonocyte | 5.36e-49 | 59 |
macrophage dendritic cell progenitor | 1.06e-46 | 61 |
classical monocyte | 5.16e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.16e-43 | 42 |
myeloid lineage restricted progenitor cell | 1.39e-41 | 66 |
myeloid leukocyte | 4.63e-41 | 72 |
granulocyte monocyte progenitor cell | 1.18e-40 | 67 |
myeloid cell | 2.38e-21 | 108 |
common myeloid progenitor | 2.38e-21 | 108 |
nongranular leukocyte | 1.23e-19 | 115 |
leukocyte | 8.48e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.51e-15 | 120 |
hematopoietic stem cell | 8.39e-10 | 168 |
hematopoietic oligopotent progenitor cell | 2.44e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.44e-09 | 161 |
macrophage | 7.94e-09 | 6 |
hematopoietic cell | 1.87e-08 | 177 |
intermediate monocyte | 2.41e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.41e-07 | 9 |