FFCP PHASE1:Hg19::chr9:14313893..14313908,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7785 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=36bp_to_uc003zle.2,uc003zlf.2,uc011lmo.1_5end | |||
|coexpression_cluster_id=C2941 | |||
|description=CAGE_peak_7_at_NFIB_5end | |||
|id=chr9:14313893..14313908,- | |||
|ontology_enrichment_celltype=CL:0000220!5.85e-10!246;CL:0002321!8.29e-10!248;CL:0000115!6.33e-08!35;CL:0002139!1.38e-07!24;CL:0002078!2.13e-07!44;CL:0002319!3.08e-07!25;CL:0000213!4.80e-07!57;CL:0000215!4.80e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.27e-09;36!CL:0002139;4.03e-08;24!CL:0002319;2.34e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.90e-10,36;CL:0002139,1.99e-08,24;CL:0002078,2.02e-08,45;CL:0002319,2.33e-07,25;CL:0000213,9.17e-07,58;CL:0000215,9.17e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.58e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.69e-33!286;UBERON:0004111!7.74e-27!241;UBERON:0000119!7.61e-24!312;UBERON:0000025!9.13e-24!194;UBERON:0000483!9.66e-24!309;UBERON:0000481!3.10e-21!347;UBERON:0000468!6.87e-21!659;UBERON:0000073!2.85e-20!94;UBERON:0001016!2.85e-20!94;UBERON:0000467!5.01e-20!625;UBERON:0000922!6.15e-20!612;UBERON:0000480!9.54e-20!626;UBERON:0000924!1.02e-19!173;UBERON:0006601!1.02e-19!173;UBERON:0002050!4.50e-19!605;UBERON:0005423!4.50e-19!605;UBERON:0004121!6.44e-19!169;UBERON:0005743!7.95e-19!86;UBERON:0000923!1.03e-18!604;UBERON:0005291!1.03e-18!604;UBERON:0006598!1.03e-18!604;UBERON:0002532!1.03e-18!604;UBERON:0001017!1.52e-18!82;UBERON:0002346!4.16e-18!90;UBERON:0007023!1.53e-17!115;UBERON:0003075!2.38e-17!86;UBERON:0007284!2.38e-17!86;UBERON:0000153!6.48e-15!129;UBERON:0007811!6.48e-15!129;UBERON:0000475!6.63e-15!365;UBERON:0000033!7.46e-15!123;UBERON:0000955!9.51e-15!69;UBERON:0006238!9.51e-15!69;UBERON:0001049!2.14e-14!57;UBERON:0005068!2.14e-14!57;UBERON:0006241!2.14e-14!57;UBERON:0007135!2.14e-14!57;UBERON:0002616!7.66e-13!59;UBERON:0000064!2.39e-12!219;UBERON:0001048!1.65e-10!168;UBERON:0003056!2.86e-10!61;UBERON:0003914!5.68e-10!118;UBERON:0001893!5.84e-10!34;UBERON:0002049!7.32e-10!79;UBERON:0007798!7.32e-10!79;UBERON:0002020!7.83e-10!34;UBERON:0003528!7.83e-10!34;UBERON:0002780!1.02e-09!41;UBERON:0001890!1.02e-09!41;UBERON:0006240!1.02e-09!41;UBERON:0002791!1.11e-09!33;UBERON:0001869!1.19e-09!32;UBERON:0004872!1.51e-09!84;UBERON:0000062!3.30e-09!511;UBERON:0003080!4.25e-09!42;UBERON:0000055!1.60e-08!69;UBERON:0000956!3.29e-08!25;UBERON:0000203!3.29e-08!25;UBERON:0001981!8.16e-08!60;UBERON:0007500!8.16e-08!60;UBERON:0004537!8.16e-08!60;UBERON:0006965!8.16e-08!60;UBERON:0001009!2.73e-07!113;UBERON:0003076!5.08e-07!15;UBERON:0003057!5.08e-07!15;UBERON:0004535!8.18e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.05e-09;53!UBERON:0002616;3.05e-09;53!UBERON:0002791;4.77e-09;32!UBERON:0001869;7.09e-09;32!UBERON:0001016;8.99e-09;83!UBERON:0003528;9.15e-09;34!UBERON:0002020;9.15e-09;34!UBERON:0001893;1.55e-08;34!UBERON:0000956;1.93e-08;25!UBERON:0000203;1.93e-08;25!UBERON:0000955;4.50e-08;68!UBERON:0001017;5.18e-08;75!UBERON:0002780;7.42e-08;41!UBERON:0001890;7.42e-08;41!UBERON:0004732;1.05e-07;13!UBERON:0004733;3.57e-07;12!UBERON:0002028;3.57e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,7.89e-26,240;UBERON:0000025,1.34e-23,192;UBERON:0007023,1.77e-20,114;UBERON:0001016,2.07e-20,89;UBERON:0001017,2.56e-20,81;UBERON:0011216,2.42e-19,223;UBERON:0000483,6.71e-19,306;UBERON:0000119,2.79e-18,309;UBERON:0002346,9.04e-18,86;UBERON:0003075,2.07e-17,82;UBERON:0007284,2.07e-17,82;UBERON:0001049,1.10e-16,56;UBERON:0005068,1.10e-16,56;UBERON:0006241,1.10e-16,56;UBERON:0007135,1.10e-16,56;UBERON:0010314,1.94e-16,132;UBERON:0000955,5.96e-16,68;UBERON:0006238,5.96e-16,68;UBERON:0000923,1.35e-15,560;UBERON:0010316,1.35e-15,560;UBERON:0005291,1.35e-15,560;UBERON:0006598,1.35e-15,560;UBERON:0010317,1.35e-15,560;UBERON:0002532,1.35e-15,560;UBERON:0002050,1.63e-15,564;UBERON:0000073,3.45e-15,53;UBERON:0002616,3.45e-15,53;UBERON:0004121,4.16e-15,171;UBERON:0000924,4.16e-15,171;UBERON:0006601,4.16e-15,171;UBERON:0005423,1.65e-13,581;UBERON:0010371,1.99e-13,104;UBERON:0000922,3.52e-13,592;UBERON:0001048,1.28e-10,160;UBERON:0003056,9.45e-10,61;UBERON:0002780,9.63e-10,41;UBERON:0001890,9.63e-10,41;UBERON:0003080,9.63e-10,41;UBERON:0006240,9.63e-10,41;UBERON:0001893,1.00e-09,34;UBERON:0003528,1.41e-09,34;UBERON:0002020,1.41e-09,34;UBERON:0001869,2.77e-09,32;UBERON:0002791,4.76e-09,32;UBERON:0003076,5.15e-09,15;UBERON:0003057,5.15e-09,15;UBERON:0003914,2.25e-08,117;UBERON:0000055,2.53e-08,68;UBERON:0000956,2.57e-08,25;UBERON:0000203,2.57e-08,25;UBERON:0002049,2.83e-08,78;UBERON:0007798,2.83e-08,78;UBERON:0004732,4.73e-08,13;UBERON:0004872,6.95e-08,83;UBERON:0004733,1.91e-07,12;UBERON:0002028,1.91e-07,12;UBERON:0007277,1.91e-07,12;UBERON:0007500,8.27e-07,59;UBERON:0001981,8.27e-07,59;UBERON:0004537,8.27e-07,59;UBERON:0006965,8.27e-07,59;UBERON:0004797,8.79e-07,7 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0,0.522371256399677,0,1.39560233594486,0.655324116390517,0,0.123766352960047,0.331397375727916,0.672325146451775,0,1.46062018077475,0.487932798790507,2.21617904538218,2.04000691244253,1.88072832886853,3.72106783270374,5.61185142798825,5.39833350257652,0,0,0,0,0,0,0.919421224478927,1.8072355126695,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.15076305659177,2.1686349143074,0.50133791063589,0.579386075843295,0,0,1.98523116044542,1.77383517970051,2.0202000709419,0.982343066232845,0.728590576585084,1.11235332835329,0,0,0,0,0,0,3.18019851786728,0.860234595106124,1.73570250803797,1.69592382577203,1.67799774483962,4.67700671298115,2.50793959844173,7.23566925674121,8.89415656716776,9.37217715741077,2.41697590265488,0.760272105718513,1.95249646038536,4.77962004449629,2.43042584364528,5.17938424047663,0.898117490504679,3.49095589498299,0,0,3.11442964681692,0,0,0.436094052142534,0,3.29239330327907,1.85372853138506,6.3104056564739,6.38403087957043,0.560677600142307,1.06748995729705,0.24666754841716,3.42332138939743,3.50247747381189,2.7788523529288,0.756787138224657,1.72852777344,1.17160715916898,0,0,0.149448680551801,0.117434498643765,0.485618833104395,0.140450806702248,0,0.491337269247072,0.723280468230358,1.18800285728205,0,0,0,0.336672227908132,1.25118519871964,0,0.438977620880838,0,0.600952235626387,1.36118619792025,0.358779271377724,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0.194874010322397,0.252433774244115,0.368199594569197,0.646584227275248,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.265059536642971,0.116193942869518,0.518305275076852,0.252320850875628,0,0,0.643240938192885,0,0,0,1.30137480043828,1.85443159085912,1.92808823906786,1.98529150918309,0.871517776369625,2.84724742933316,1.8876383142423,1.37355025587742,1.53898862778556,3.69077727312324,4.20725321410337,0,1.47008711385542,1.26755034821831,2.94848165003288,4.72631925345123,0,1.47586126251736,0.857839051492628,0.329250856225877,2.24803506515239,0,0.740707561268237,0.325808305310325,0,1.44331342025273,2.55046890945169,0.70445216541493,1.29929802984966,1.85194205030644,2.09279567458058,0,0,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0.895585227028483,0.581267877027924,0.383382679165211,0,0,0,0,0.12624243342638,1.39695367442772,0.381988425558278,0,0,0.514137463516618,0.300343057843917,0.857479297891735,0.448524337381443,0.43596006883328,0.8800594298514,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0.532844358032199,1.00084595560703,0,0,0.65147236858747,1.06617584622764,0.791951872933429,0,0,0.299918973546171,0,0,0,0.718874566474748,0,0,0,0.410952645100767,0.895304816199478,0,0,0,0,10.9260688415659,26.0279707715243,13.1459098172208,9.38091085872353,12.7587750330633,0,0,0,0.858840442033979,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0,0.300946099727719,0,2.0694614258501,0.664225598535437,0,0.173767228936166,0,0.343143423810856,0,0,0,0.606255142892519,0,0.30239029332968,0.496215615637554,0,0,0.512556597022804,0.511707249066704,0.321707842287215,0,0.925258162815933,0.355123450626254,2.13530605635904,0.519254429183621,0.813472649219715,0,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,2.27466768141793,2.55140557914773,2.37507507712353,3.08454505380579,0,0,0.509752546090077,0,0,0,0,1.28225062558195,0.328014645699706,0.976135183992909,1.13345112812495,0.0915694648183434,0.247528499761764,0.574265537996172,0,1.6068392984416,4.64019447802185,2.15668063960502,1.22802939780904,0.964856007391714,1.71872391789238,2.0302337147992,1.96021243057032,1.15741646340759,0.991709492165869,0.768760269460425,2.16941611240793,0.2023155617111,0.464845549297286,1.25924938732256,1.3940745403212,1.84820148105653,0.532306030317022,1.73986598415015,0.74129687641568,1.5743737541619,0,0.632758849437452,0.762520775695299,0,0.42793898803392,0.95460974377781,0,0,0.54907405947211,0.706874414074119,1.41527737101321,0,0.421258456238981,0,1.70599442741899,1.05650146756755,0.272999822815972,0.141405431953713,0,0.551365343546124,0,3.06915619677634,0,0,0.405820753925408,0.6196469961995,0.845086807596724,0.717056761020258,0.491245205065606,0,0,0.633322905892992,0.658589785919804,1.13841952129715,0.699869440489966,0.288666338176536,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,2.91265252198832,0,0.568272293612826,0,0.593929361665277,0.614321404198464,0,2.2507106625682,7.01244841644307,0,1.05562704063997,2.59022384726391,0.828851746593443,0,1.22722419002586,0.492339221844278,0,2.06697207638852,0.358042349351218,0,1.7755813014648,0,0,2.90799823828566,1.3915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| |||
|short_description=p7@NFIB | |||
}} |
Revision as of 00:52, 23 January 2014
Short description: | p7@NFIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NFIB_5end |
Coexpression cluster: | C2941_parietal_medulloblastoma_lung_occipital_Neural_temporal_small |
Association with transcript: | 36bp_to_uc003zle.2, uc003zlf.2, uc011lmo.1_5end |
EntrezGene: | NFIB |
HGNC: | 7785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.90e-10 | 36 |
endothelial cell of vascular tree | 1.99e-08 | 24 |
meso-epithelial cell | 2.02e-08 | 45 |
neural cell | 2.33e-07 | 25 |
lining cell | 9.17e-07 | 58 |
barrier cell | 9.17e-07 | 58 |