FFCP PHASE1:Mm9::chr6:114198039..114198052,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=287|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:114198039..114198052,+|id=chr6:114198039..114198052,+|ontology_enrichment_celltype=CL:0000117!1.14e-14!23;CL:0000337!1.14e-14!23;CL:0000540!9.76e-10!33;CL:0000047!9.76e-10!33;CL:0000031!9.76e-10!33;CL:0000404!9.76e-10!33;CL:0000393!1.84e-07!39;CL:0000211!1.84e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.53e-21,23;CL:0000337,1.53e-21,23;CL:0000540,3.37e-14,33;CL:0000047,3.37e-14,33;CL:0000031,3.37e-14,33;CL:0000404,3.37e-14,33;CL:0000393,1.33e-11,39;CL:0000211,1.33e-11,39;CL:0002610,7.72e-11,3;CL:0002614,9.64e-11,3;CL:0002612,2.68e-10,3;CL:0002319,2.82e-10,43;CL:0000221,5.54e-10,44;CL:0000133,5.54e-10,44;CL:0002611,4.72e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.00e-32!52;UBERON:0005068!3.00e-32!52;UBERON:0006241!3.00e-32!52;UBERON:0007135!3.00e-32!52;UBERON:0001017!2.10e-30!73;UBERON:0005743!2.10e-30!73;UBERON:0000033!8.35e-30!63;UBERON:0000955!1.53e-29!50;UBERON:0006238!1.53e-29!50;UBERON:0000073!3.21e-29!75;UBERON:0001016!3.21e-29!75;UBERON:0002616!2.86e-28!49;UBERON:0002346!3.86e-27!71;UBERON:0003075!3.86e-27!71;UBERON:0007284!3.86e-27!71;UBERON:0004121!2.36e-23!102;UBERON:0000924!2.36e-23!102;UBERON:0006601!2.36e-23!102;UBERON:0003056!6.31e-23!49;UBERON:0002020!2.77e-22!34;UBERON:0003080!1.90e-21!40;UBERON:0002780!3.03e-20!39;UBERON:0001890!3.03e-20!39;UBERON:0006240!3.03e-20!39;UBERON:0007811!2.04e-19!86;UBERON:0000153!1.11e-16!94;UBERON:0002791!5.92e-16!29;UBERON:0003528!5.92e-16!29;UBERON:0001893!5.92e-16!29;UBERON:0003076!2.48e-11!12;UBERON:0003057!2.48e-11!12;UBERON:0002420!2.07e-10!8;UBERON:0007245!2.07e-10!8;UBERON:0010009!2.07e-10!8;UBERON:0010011!2.07e-10!8;UBERON:0000454!2.07e-10!8;UBERON:0002021!2.29e-10!10;UBERON:0000411!2.29e-10!10;UBERON:0001950!2.29e-10!10;UBERON:0002240!9.66e-10!6;UBERON:0005174!9.66e-10!6;UBERON:0001137!9.66e-10!6;UBERON:0002298!1.63e-09!6;UBERON:0000025!1.86e-08!114;UBERON:0001948!1.98e-08!5;UBERON:0002315!1.98e-08!5;UBERON:0000956!3.72e-08!21;UBERON:0001869!3.72e-08!21;UBERON:0000203!3.72e-08!21;UBERON:0002619!7.70e-08!17;UBERON:0004111!8.60e-08!122;UBERON:0002950!5.15e-07!4;UBERON:0001891!5.15e-07!4;UBERON:0009616!5.15e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.47e-32,54;UBERON:0001017,3.75e-29,73;UBERON:0001016,3.03e-28,75;UBERON:0001049,1.65e-27,52;UBERON:0005068,1.65e-27,52;UBERON:0006241,1.65e-27,52;UBERON:0007135,1.65e-27,52;UBERON:0002346,1.26e-23,64;UBERON:0003075,1.26e-23,64;UBERON:0007284,1.26e-23,64;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0002020,4.77e-23,34;UBERON:0010371,3.86e-20,73;UBERON:0002240,1.36e-19,6;UBERON:0005174,1.36e-19,6;UBERON:0001137,1.36e-19,6;UBERON:0000955,1.72e-17,47;UBERON:0006238,1.72e-17,47;UBERON:0001948,1.06e-16,5;UBERON:0002315,1.06e-16,5;UBERON:0003076,2.49e-16,12;UBERON:0003057,2.49e-16,12;UBERON:0002616,8.78e-16,46;UBERON:0010314,5.17e-15,92;UBERON:0003080,3.58e-14,40;UBERON:0002950,1.36e-13,4;UBERON:0001891,1.36e-13,4;UBERON:0009616,1.36e-13,4;UBERON:0010286,1.36e-13,4;UBERON:0002021,1.88e-13,10;UBERON:0000411,1.88e-13,10;UBERON:0001950,1.88e-13,10;UBERON:0003528,1.03e-12,29;UBERON:0002791,1.03e-12,29;UBERON:0001893,1.03e-12,29;UBERON:0003056,1.12e-12,49;UBERON:0002780,1.59e-12,39;UBERON:0001890,1.59e-12,39;UBERON:0006240,1.59e-12,39;UBERON:0004684,7.72e-11,3;UBERON:0002275,7.72e-11,3;UBERON:0002038,9.64e-11,3;UBERON:0009663,9.64e-11,3;UBERON:0009661,9.64e-11,3;UBERON:0000125,9.64e-11,3;UBERON:0002308,9.64e-11,3;UBERON:0002257,2.68e-10,3;UBERON:0000025,4.63e-10,114;UBERON:0002420,8.67e-10,8;UBERON:0007245,8.67e-10,8;UBERON:0010009,8.67e-10,8;UBERON:0010011,8.67e-10,8;UBERON:0000454,8.67e-10,8;UBERON:0004111,4.26e-09,122;UBERON:0002256,4.72e-08,2;UBERON:0011216,8.52e-08,194;UBERON:0002619,1.44e-07,17;UBERON:0001896,3.99e-07,2;UBERON:0002298,3.99e-07,2;UBERON:0005290,3.99e-07,2;UBERON:0010096,3.99e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0,9.99778445413313,8.1721360152097,0,0,0,7.70811166995721,5.74593021383345,6.91229399653096,0.263772575460388,0.0914876436024097,1.04182674111352,7.2587579740359,6.19038871034848,5.34793867218835,8.83885756421003,6.12198227436143,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,2.69623150928681,1.83000241127451,0.628271760564322,0.521472960576829,0,3.32460871295296,2.43361894601636,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,1.03111909406213,1.37016503954128,1.5107877947794,0,0.45032120322422,0.906284817968409,1.55328093525546,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0,0,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0,0,0.409231043169689,0,0.385813221962283,0,0,0.429742108096597,0,0.220591419119515,0|short_description=p@chr6:114198039..114198052,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:114198039..114198052,+ | |||
|description=CAGE_peak_at_chr6:114198039..114198052,+ | |||
|id=chr6:114198039..114198052,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.14e-14!23;CL:0000337!1.14e-14!23;CL:0000540!9.76e-10!33;CL:0000047!9.76e-10!33;CL:0000031!9.76e-10!33;CL:0000404!9.76e-10!33;CL:0000393!1.84e-07!39;CL:0000211!1.84e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.53e-21,23;CL:0000337,1.53e-21,23;CL:0000540,3.37e-14,33;CL:0000047,3.37e-14,33;CL:0000031,3.37e-14,33;CL:0000404,3.37e-14,33;CL:0000393,1.33e-11,39;CL:0000211,1.33e-11,39;CL:0002610,7.72e-11,3;CL:0002614,9.64e-11,3;CL:0002612,2.68e-10,3;CL:0002319,2.82e-10,43;CL:0000221,5.54e-10,44;CL:0000133,5.54e-10,44;CL:0002611,4.72e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.00e-32!52;UBERON:0005068!3.00e-32!52;UBERON:0006241!3.00e-32!52;UBERON:0007135!3.00e-32!52;UBERON:0001017!2.10e-30!73;UBERON:0005743!2.10e-30!73;UBERON:0000033!8.35e-30!63;UBERON:0000955!1.53e-29!50;UBERON:0006238!1.53e-29!50;UBERON:0000073!3.21e-29!75;UBERON:0001016!3.21e-29!75;UBERON:0002616!2.86e-28!49;UBERON:0002346!3.86e-27!71;UBERON:0003075!3.86e-27!71;UBERON:0007284!3.86e-27!71;UBERON:0004121!2.36e-23!102;UBERON:0000924!2.36e-23!102;UBERON:0006601!2.36e-23!102;UBERON:0003056!6.31e-23!49;UBERON:0002020!2.77e-22!34;UBERON:0003080!1.90e-21!40;UBERON:0002780!3.03e-20!39;UBERON:0001890!3.03e-20!39;UBERON:0006240!3.03e-20!39;UBERON:0007811!2.04e-19!86;UBERON:0000153!1.11e-16!94;UBERON:0002791!5.92e-16!29;UBERON:0003528!5.92e-16!29;UBERON:0001893!5.92e-16!29;UBERON:0003076!2.48e-11!12;UBERON:0003057!2.48e-11!12;UBERON:0002420!2.07e-10!8;UBERON:0007245!2.07e-10!8;UBERON:0010009!2.07e-10!8;UBERON:0010011!2.07e-10!8;UBERON:0000454!2.07e-10!8;UBERON:0002021!2.29e-10!10;UBERON:0000411!2.29e-10!10;UBERON:0001950!2.29e-10!10;UBERON:0002240!9.66e-10!6;UBERON:0005174!9.66e-10!6;UBERON:0001137!9.66e-10!6;UBERON:0002298!1.63e-09!6;UBERON:0000025!1.86e-08!114;UBERON:0001948!1.98e-08!5;UBERON:0002315!1.98e-08!5;UBERON:0000956!3.72e-08!21;UBERON:0001869!3.72e-08!21;UBERON:0000203!3.72e-08!21;UBERON:0002619!7.70e-08!17;UBERON:0004111!8.60e-08!122;UBERON:0002950!5.15e-07!4;UBERON:0001891!5.15e-07!4;UBERON:0009616!5.15e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.47e-32,54;UBERON:0001017,3.75e-29,73;UBERON:0001016,3.03e-28,75;UBERON:0001049,1.65e-27,52;UBERON:0005068,1.65e-27,52;UBERON:0006241,1.65e-27,52;UBERON:0007135,1.65e-27,52;UBERON:0002346,1.26e-23,64;UBERON:0003075,1.26e-23,64;UBERON:0007284,1.26e-23,64;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0002020,4.77e-23,34;UBERON:0010371,3.86e-20,73;UBERON:0002240,1.36e-19,6;UBERON:0005174,1.36e-19,6;UBERON:0001137,1.36e-19,6;UBERON:0000955,1.72e-17,47;UBERON:0006238,1.72e-17,47;UBERON:0001948,1.06e-16,5;UBERON:0002315,1.06e-16,5;UBERON:0003076,2.49e-16,12;UBERON:0003057,2.49e-16,12;UBERON:0002616,8.78e-16,46;UBERON:0010314,5.17e-15,92;UBERON:0003080,3.58e-14,40;UBERON:0002950,1.36e-13,4;UBERON:0001891,1.36e-13,4;UBERON:0009616,1.36e-13,4;UBERON:0010286,1.36e-13,4;UBERON:0002021,1.88e-13,10;UBERON:0000411,1.88e-13,10;UBERON:0001950,1.88e-13,10;UBERON:0003528,1.03e-12,29;UBERON:0002791,1.03e-12,29;UBERON:0001893,1.03e-12,29;UBERON:0003056,1.12e-12,49;UBERON:0002780,1.59e-12,39;UBERON:0001890,1.59e-12,39;UBERON:0006240,1.59e-12,39;UBERON:0004684,7.72e-11,3;UBERON:0002275,7.72e-11,3;UBERON:0002038,9.64e-11,3;UBERON:0009663,9.64e-11,3;UBERON:0009661,9.64e-11,3;UBERON:0000125,9.64e-11,3;UBERON:0002308,9.64e-11,3;UBERON:0002257,2.68e-10,3;UBERON:0000025,4.63e-10,114;UBERON:0002420,8.67e-10,8;UBERON:0007245,8.67e-10,8;UBERON:0010009,8.67e-10,8;UBERON:0010011,8.67e-10,8;UBERON:0000454,8.67e-10,8;UBERON:0004111,4.26e-09,122;UBERON:0002256,4.72e-08,2;UBERON:0011216,8.52e-08,194;UBERON:0002619,1.44e-07,17;UBERON:0001896,3.99e-07,2;UBERON:0002298,3.99e-07,2;UBERON:0005290,3.99e-07,2;UBERON:0010096,3.99e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0,9.99778445413313,8.1721360152097,0,0,0,7.70811166995721,5.74593021383345,6.91229399653096,0.263772575460388,0.0914876436024097,1.04182674111352,7.2587579740359,6.19038871034848,5.34793867218835,8.83885756421003,6.12198227436143,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,2.69623150928681,1.83000241127451,0.628271760564322,0.521472960576829,0,3.32460871295296,2.43361894601636,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,1.03111909406213,1.37016503954128,1.5107877947794,0,0.45032120322422,0.906284817968409,1.55328093525546,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0,0,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0,0,0.409231043169689,0,0.385813221962283,0,0,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p@chr6:114198039..114198052,+ | |||
}} |
Latest revision as of 22:30, 4 August 2015
Short description: | p@chr6:114198039..114198052, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:114198039..114198052, + |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.53e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.53e-21 | 23 |
neuron | 3.37e-14 | 33 |
neuronal stem cell | 3.37e-14 | 33 |
neuroblast | 3.37e-14 | 33 |
electrically signaling cell | 3.37e-14 | 33 |
electrically responsive cell | 1.33e-11 | 39 |
electrically active cell | 1.33e-11 | 39 |
raphe nuclei neuron | 7.72e-11 | 3 |
neuron of the substantia nigra | 9.64e-11 | 3 |
neuron of the ventral spinal cord | 2.68e-10 | 3 |
neural cell | 2.82e-10 | 43 |
ectodermal cell | 5.54e-10 | 44 |
neurectodermal cell | 5.54e-10 | 44 |
neuron of the dorsal spinal cord | 4.72e-08 | 2 |