FFCP PHASE1:Mm9::chr8:72619177..72619195,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr8:72619177..72619195,- | |id=chr8:72619177..72619195,- | ||
|ontology_enrichment_celltype=CL:0000117!4.74e-24!23;CL:0000337!4.74e-24!23;CL:0002319!3.04e-21!43;CL:0000221!1.69e-20!44;CL:0000133!1.69e-20!44;CL:0000055!1.11e-16!50;CL:0000540!1.72e-15!33;CL:0000047!1.72e-15!33;CL:0000031!1.72e-15!33;CL:0000404!1.72e-15!33;CL:0000393!7.67e-12!39;CL:0000211!7.67e-12!39;CL:0002321!6.24e-09!70;CL:0000220!6.24e-09!70;CL:0002609!2.31e-07!6;CL:0002453!2.35e-07!8 | |ontology_enrichment_celltype=CL:0000117!4.74e-24!23;CL:0000337!4.74e-24!23;CL:0002319!3.04e-21!43;CL:0000221!1.69e-20!44;CL:0000133!1.69e-20!44;CL:0000055!1.11e-16!50;CL:0000540!1.72e-15!33;CL:0000047!1.72e-15!33;CL:0000031!1.72e-15!33;CL:0000404!1.72e-15!33;CL:0000393!7.67e-12!39;CL:0000211!7.67e-12!39;CL:0002321!6.24e-09!70;CL:0000220!6.24e-09!70;CL:0002609!2.31e-07!6;CL:0002453!2.35e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.34e-39,23;CL:0000337,9.34e-39,23;CL:0002319,3.30e-32,43;CL:0000221,2.58e-31,44;CL:0000133,2.58e-31,44;CL:0000540,2.82e-25,33;CL:0000047,2.82e-25,33;CL:0000031,2.82e-25,33;CL:0000404,2.82e-25,33;CL:0000393,1.63e-20,39;CL:0000211,1.63e-20,39;CL:0002321,4.71e-17,70;CL:0002609,5.62e-12,6;CL:0002453,1.23e-09,8;CL:0000333,1.55e-07,10;CL:0000095,1.55e-07,10;CL:0000243,1.55e-07,10;CL:0000123,1.55e-07,10;CL:0000125,1.55e-07,10;CL:0000030,1.55e-07,10;CL:0000339,1.55e-07,10;CL:0000723,1.55e-07,91;CL:0000048,1.55e-07,91;CL:0002612,2.39e-07,3;CL:0002613,7.12e-07,3;CL:0002608,9.84e-07,3;CL:0000034,9.99e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.43e-35!34;UBERON:0001017!2.90e-35!73;UBERON:0005743!2.90e-35!73;UBERON:0000073!4.70e-35!75;UBERON:0001016!4.70e-35!75;UBERON:0001049!3.34e-32!52;UBERON:0005068!3.34e-32!52;UBERON:0006241!3.34e-32!52;UBERON:0007135!3.34e-32!52;UBERON:0000955!4.39e-31!50;UBERON:0006238!4.39e-31!50;UBERON:0002616!3.08e-30!49;UBERON:0002791!1.84e-29!29;UBERON:0003528!1.84e-29!29;UBERON:0001893!1.84e-29!29;UBERON:0000033!1.52e-27!63;UBERON:0003080!2.95e-27!40;UBERON:0002780!8.63e-27!39;UBERON:0001890!8.63e-27!39;UBERON:0006240!8.63e-27!39;UBERON:0003056!2.61e-26!49;UBERON:0004121!1.05e-25!102;UBERON:0000924!1.05e-25!102;UBERON:0006601!1.05e-25!102;UBERON:0002346!6.75e-25!71;UBERON:0003075!6.75e-25!71;UBERON:0007284!6.75e-25!71;UBERON:0000956!5.30e-22!21;UBERON:0001869!5.30e-22!21;UBERON:0000203!5.30e-22!21;UBERON:0002619!4.49e-18!17;UBERON:0007811!4.33e-16!86;UBERON:0000153!1.74e-13!94;UBERON:0002021!2.06e-11!10;UBERON:0000411!2.06e-11!10;UBERON:0001950!2.06e-11!10;UBERON:0002420!1.86e-08!8;UBERON:0007245!1.86e-08!8;UBERON:0010009!1.86e-08!8;UBERON:0010011!1.86e-08!8;UBERON:0000454!1.86e-08!8;UBERON:0001954!4.52e-08!7;UBERON:0003022!4.52e-08!7;UBERON:0002421!4.52e-08!7;UBERON:0000349!4.52e-08!7;UBERON:0002600!4.52e-08!7;UBERON:0000025!3.35e-07!114;UBERON:0001948!4.07e-07!5;UBERON:0002315!4.07e-07!5 | |ontology_enrichment_uberon=UBERON:0002020!1.43e-35!34;UBERON:0001017!2.90e-35!73;UBERON:0005743!2.90e-35!73;UBERON:0000073!4.70e-35!75;UBERON:0001016!4.70e-35!75;UBERON:0001049!3.34e-32!52;UBERON:0005068!3.34e-32!52;UBERON:0006241!3.34e-32!52;UBERON:0007135!3.34e-32!52;UBERON:0000955!4.39e-31!50;UBERON:0006238!4.39e-31!50;UBERON:0002616!3.08e-30!49;UBERON:0002791!1.84e-29!29;UBERON:0003528!1.84e-29!29;UBERON:0001893!1.84e-29!29;UBERON:0000033!1.52e-27!63;UBERON:0003080!2.95e-27!40;UBERON:0002780!8.63e-27!39;UBERON:0001890!8.63e-27!39;UBERON:0006240!8.63e-27!39;UBERON:0003056!2.61e-26!49;UBERON:0004121!1.05e-25!102;UBERON:0000924!1.05e-25!102;UBERON:0006601!1.05e-25!102;UBERON:0002346!6.75e-25!71;UBERON:0003075!6.75e-25!71;UBERON:0007284!6.75e-25!71;UBERON:0000956!5.30e-22!21;UBERON:0001869!5.30e-22!21;UBERON:0000203!5.30e-22!21;UBERON:0002619!4.49e-18!17;UBERON:0007811!4.33e-16!86;UBERON:0000153!1.74e-13!94;UBERON:0002021!2.06e-11!10;UBERON:0000411!2.06e-11!10;UBERON:0001950!2.06e-11!10;UBERON:0002420!1.86e-08!8;UBERON:0007245!1.86e-08!8;UBERON:0010009!1.86e-08!8;UBERON:0010011!1.86e-08!8;UBERON:0000454!1.86e-08!8;UBERON:0001954!4.52e-08!7;UBERON:0003022!4.52e-08!7;UBERON:0002421!4.52e-08!7;UBERON:0000349!4.52e-08!7;UBERON:0002600!4.52e-08!7;UBERON:0000025!3.35e-07!114;UBERON:0001948!4.07e-07!5;UBERON:0002315!4.07e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.69e-53,34;UBERON:0001017,6.04e-43,73;UBERON:0000073,6.48e-43,54;UBERON:0003528,1.41e-42,29;UBERON:0002791,1.41e-42,29;UBERON:0001893,1.41e-42,29;UBERON:0001016,1.46e-41,75;UBERON:0001049,4.66e-37,52;UBERON:0005068,4.66e-37,52;UBERON:0006241,4.66e-37,52;UBERON:0007135,4.66e-37,52;UBERON:0000956,3.10e-35,21;UBERON:0001869,3.10e-35,21;UBERON:0000203,3.10e-35,21;UBERON:0004121,6.32e-31,95;UBERON:0000924,6.32e-31,95;UBERON:0006601,6.32e-31,95;UBERON:0002780,5.98e-30,39;UBERON:0001890,5.98e-30,39;UBERON:0006240,5.98e-30,39;UBERON:0003080,4.92e-29,40;UBERON:0002616,7.42e-29,46;UBERON:0002346,1.32e-28,64;UBERON:0003075,1.32e-28,64;UBERON:0007284,1.32e-28,64;UBERON:0002619,3.48e-28,17;UBERON:0000955,4.31e-28,47;UBERON:0006238,4.31e-28,47;UBERON:0010371,4.34e-24,73;UBERON:0003056,1.74e-22,49;UBERON:0002021,3.10e-19,10;UBERON:0000411,3.10e-19,10;UBERON:0001950,3.10e-19,10;UBERON:0010314,1.84e-17,92;UBERON:0000025,1.48e-12,114;UBERON:0001948,1.54e-11,5;UBERON:0002315,1.54e-11,5;UBERON:0004111,3.23e-11,122;UBERON:0011216,1.84e-10,194;UBERON:0001954,2.07e-10,7;UBERON:0003022,2.07e-10,7;UBERON:0002421,2.07e-10,7;UBERON:0000349,2.07e-10,7;UBERON:0002600,2.07e-10,7;UBERON:0002240,1.58e-09,6;UBERON:0005174,1.58e-09,6;UBERON:0001137,1.58e-09,6;UBERON:0002420,1.20e-08,8;UBERON:0007245,1.20e-08,8;UBERON:0010009,1.20e-08,8;UBERON:0010011,1.20e-08,8;UBERON:0000454,1.20e-08,8;UBERON:0003076,3.60e-08,12;UBERON:0003057,3.60e-08,12;UBERON:0002257,2.39e-07,3;UBERON:0000369,6.14e-07,5;UBERON:0002435,6.14e-07,5;UBERON:0000204,6.14e-07,5;UBERON:0010082,6.14e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.79655344036982,2.19686182734472,2.72201858703997,1.95980990275508,0,0,0,0,0,0,0,1.01158230429799,3.1739458756322,1.90149421051854,0,0,0,0,0,13.4820049733282,9.60545763303886,2.17748185847803,3.10513658162888,2.10324961351382,5.14171771926846,8.1721360152097,1.22490799214954,2.1086003624012,5.51531271966013,2.20231761998777,1.27687338085188,1.99688493233117,1.45074916503213,2.56165402086747,4.68822033501084,1.67509799400829,0.56276261003168,1.5279824777681,10.0173719061047,6.69146899755784,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,2.63874139437015,1.39059456153821,0.767146371990992,0.83115217823824,0.486723789203273,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,4.42489833230923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05490517932983,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,2.30162618253588,1.71868654031819,3.78077001156113,1.37016503954128,1.5107877947794,3.37511250115903,3.15224842256954,3.17199686288943,2.07104124700728,0.207574695168353,1.19707462020309,0,0.486213434136588,0,0.183843508450014,0,0.824140228955577,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.581385666529314,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,1.12228454331548,0.711810108745045,0.197008964751127,1.22769312950907,0.464810523557898,0,0.999242311751784,0.467863216890817,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.79655344036982,2.19686182734472,2.72201858703997,1.95980990275508,0,0,0,0,0,0,0,1.01158230429799,3.1739458756322,1.90149421051854,0,0,0,0,0,13.4820049733282,9.60545763303886,2.17748185847803,3.10513658162888,2.10324961351382,5.14171771926846,8.1721360152097,1.22490799214954,2.1086003624012,5.51531271966013,2.20231761998777,1.27687338085188,1.99688493233117,1.45074916503213,2.56165402086747,4.68822033501084,1.67509799400829,0.56276261003168,1.5279824777681,10.0173719061047,6.69146899755784,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,2.63874139437015,1.39059456153821,0.767146371990992,0.83115217823824,0.486723789203273,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,4.42489833230923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05490517932983,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,2.30162618253588,1.71868654031819,3.78077001156113,1.37016503954128,1.5107877947794,3.37511250115903,3.15224842256954,3.17199686288943,2.07104124700728,0.207574695168353,1.19707462020309,0,0.486213434136588,0,0.183843508450014,0,0.824140228955577,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.581385666529314,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,1.12228454331548,0.711810108745045,0.197008964751127,1.22769312950907,0.464810523557898,0,0.999242311751784,0.467863216890817,0,0.191288332068843,0,0 | ||
|short_description=p@chr8:72619177..72619195,- | |short_description=p@chr8:72619177..72619195,- | ||
}} | }} |
Revision as of 09:04, 14 November 2012
Short description: | p@chr8:72619177..72619195, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:72619177..72619195, - |
Coexpression cluster: | MCL_coexpression_mm9:530 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.34e-39 | 23 |
neuroblast (sensu Vertebrata) | 9.34e-39 | 23 |
neural cell | 3.30e-32 | 43 |
ectodermal cell | 2.58e-31 | 44 |
neurectodermal cell | 2.58e-31 | 44 |
neuron | 2.82e-25 | 33 |
neuronal stem cell | 2.82e-25 | 33 |
neuroblast | 2.82e-25 | 33 |
electrically signaling cell | 2.82e-25 | 33 |
electrically responsive cell | 1.63e-20 | 39 |
electrically active cell | 1.63e-20 | 39 |
embryonic cell | 4.71e-17 | 70 |
neuron of cerebral cortex | 5.62e-12 | 6 |
oligodendrocyte precursor cell | 1.23e-09 | 8 |
migratory neural crest cell | 1.55e-07 | 10 |
neuron associated cell | 1.55e-07 | 10 |
glial cell (sensu Vertebrata) | 1.55e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.55e-07 | 10 |
glial cell | 1.55e-07 | 10 |
glioblast | 1.55e-07 | 10 |
glioblast (sensu Vertebrata) | 1.55e-07 | 10 |
somatic stem cell | 1.55e-07 | 91 |
multi fate stem cell | 1.55e-07 | 91 |
neuron of the ventral spinal cord | 2.39e-07 | 3 |
striatum neuron | 7.12e-07 | 3 |
hippocampal neuron | 9.84e-07 | 3 |
stem cell | 9.99e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.