FFCP PHASE1:Hg19::chr11:31833965..31833994,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5954|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9934|TSSclassifier=S|UniProt=E9PP27|association_with_transcript=26bp_to_ENST00000530348_5end|coexpression_cluster_id=C11|description=CAGE_peak_10_at_RCN1_5end|id=chr11:31833965..31833994,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;4.71e-75;3!UBERON:0005425;7.62e-26;1!UBERON:0006241;1.53e-09;3!UBERON:0003056;1.53e-09;3!UBERON:0003057;1.53e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:6193;7.62e-26;1!DOID:3350;1.21e-13;2|ontology_enrichment_disease_v019_2=DOID:6193,9.79e-26,1;DOID:3350,1.37e-13,2|ontology_enrichment_uberon=UBERON:0001049!2.59e-79!57;UBERON:0005068!2.59e-79!57;UBERON:0006241!2.59e-79!57;UBERON:0007135!2.59e-79!57;UBERON:0005743!7.63e-68!86;UBERON:0002616!1.22e-67!59;UBERON:0003075!2.49e-65!86;UBERON:0007284!2.49e-65!86;UBERON:0000073!6.66e-64!94;UBERON:0001016!6.66e-64!94;UBERON:0002346!5.22e-62!90;UBERON:0001017!2.53e-61!82;UBERON:0000955!5.03e-59!69;UBERON:0006238!5.03e-59!69;UBERON:0002780!8.97e-46!41;UBERON:0001890!8.97e-46!41;UBERON:0006240!8.97e-46!41;UBERON:0003080!1.48e-44!42;UBERON:0001893!2.50e-42!34;UBERON:0002020!4.17e-42!34;UBERON:0003528!4.17e-42!34;UBERON:0003056!4.76e-40!61;UBERON:0002791!1.07e-39!33;UBERON:0003076!4.92e-38!15;UBERON:0003057!4.92e-38!15;UBERON:0004732!1.10e-37!13;UBERON:0000033!1.30e-37!123;UBERON:0001869!8.14e-37!32;UBERON:0000153!1.94e-35!129;UBERON:0007811!1.94e-35!129;UBERON:0007023!4.30e-35!115;UBERON:0004733!3.64e-34!12;UBERON:0002028!3.64e-34!12;UBERON:0007277!3.64e-34!12;UBERON:0004121!3.33e-33!169;UBERON:0000924!3.31e-32!173;UBERON:0006601!3.31e-32!173;UBERON:0002619!4.62e-26!22;UBERON:0001950!1.25e-24!20;UBERON:0002680!2.52e-24!9;UBERON:0001895!2.52e-24!9;UBERON:0010092!2.52e-24!9;UBERON:0002308!1.42e-23!9;UBERON:0000125!1.42e-23!9;UBERON:0000956!1.13e-22!25;UBERON:0000203!1.13e-22!25;UBERON:0002298!1.13e-20!8;UBERON:0002420!1.69e-18!9;UBERON:0007245!1.69e-18!9;UBERON:0010009!1.69e-18!9;UBERON:0010011!1.69e-18!9;UBERON:0000454!1.69e-18!9;UBERON:0000025!2.95e-18!194;UBERON:0009663!7.84e-18!7;UBERON:0002037!1.36e-15!6;UBERON:0006215!1.36e-15!6;UBERON:0000064!5.90e-15!219;UBERON:0000200!2.84e-14!6;UBERON:0000483!1.18e-13!309;UBERON:0000119!2.00e-13!312;UBERON:0004111!6.56e-13!241;UBERON:0001896!1.16e-11!3;UBERON:0005290!1.16e-11!3;UBERON:0010096!1.16e-11!3;UBERON:0002021!1.56e-11!5;UBERON:0005383!3.02e-11!3;UBERON:0005382!3.02e-11!3;UBERON:0006331!7.73e-11!3;UBERON:0000988!1.59e-10!3;UBERON:0000477!3.32e-10!286;UBERON:0000369!1.54e-08!4;UBERON:0002435!1.54e-08!4;UBERON:0000204!1.54e-08!4;UBERON:0010082!1.54e-08!4;UBERON:0000475!1.78e-08!365;UBERON:0005162!2.08e-08!2;UBERON:0000122!2.08e-08!2;UBERON:0001875!4.75e-08!2;UBERON:0006514!4.75e-08!2;UBERON:0001873!5.10e-08!2;UBERON:0010122!5.10e-08!2;UBERON:0002148!1.72e-07!2;UBERON:0009662!1.72e-07!2;UBERON:0001871!6.64e-07!7;UBERON:0000966!9.51e-07!5;UBERON:0005388!9.51e-07!5;UBERON:0001802!9.51e-07!5|ontology_enrichment_uberon_v019=UBERON:0002037;4.90e-38;6!UBERON:0004732;5.32e-31;13!UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0002680;1.16e-25;9!UBERON:0001895;1.16e-25;9!UBERON:0004733;1.87e-19;12!UBERON:0002028;1.87e-19;12!UBERON:0001897;1.21e-13;2!UBERON:0003714;1.21e-13;2!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2!UBERON:0010225;1.21e-13;2!UBERON:0002240;1.53e-09;3!UBERON:0005174;1.53e-09;3!UBERON:0001137;1.53e-09;3!UBERON:0002784;1.80e-07;4!UBERON:0001016;1.91e-07;83|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.90e-38,6;UBERON:0006215,4.90e-38,6;UBERON:0004732,5.32e-31,13;UBERON:0003076,6.78e-27,15;UBERON:0003057,6.78e-27,15;UBERON:0000941,7.62e-26,1;UBERON:0001785,7.62e-26,1;UBERON:0002464,7.62e-26,1;UBERON:0004904,7.62e-26,1;UBERON:0001021,7.62e-26,1;UBERON:0003902,7.62e-26,1;UBERON:0005425,7.62e-26,1;UBERON:0002680,1.17e-25,9;UBERON:0001895,1.17e-25,9;UBERON:0010092,1.17e-25,9;UBERON:0004733,1.87e-19,12;UBERON:0002028,1.87e-19,12;UBERON:0007277,1.87e-19,12;UBERON:0001897,1.07e-13,2;UBERON:0010225,1.07e-13,2;UBERON:0003714,1.21e-13,2;UBERON:0005162,1.21e-13,2;UBERON:0000122,1.21e-13,2;UBERON:0001049,3.72e-11,56;UBERON:0005068,3.72e-11,56;UBERON:0006241,3.72e-11,56;UBERON:0007135,3.72e-11,56;UBERON:0003075,7.14e-11,82;UBERON:0007284,7.14e-11,82;UBERON:0002346,2.24e-10,86;UBERON:0001016,8.14e-10,89;UBERON:0002240,1.81e-09,3;UBERON:0005174,1.81e-09,3;UBERON:0001137,1.81e-09,3;UBERON:0010371,1.32e-08,104;UBERON:0007023,6.31e-08,114;UBERON:0000073,7.87e-08,53;UBERON:0002616,7.87e-08,53;UBERON:0001017,1.01e-07,81;UBERON:0002784,1.69e-07,4;UBERON:0001781,1.80e-07,4;UBERON:0010314,8.63e-07,132|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5954 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9934 | |||
|TSSclassifier=S | |||
|UniProt=E9PP27 | |||
|association_with_transcript=26bp_to_ENST00000530348_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_10_at_RCN1_5end | |||
|id=chr11:31833965..31833994,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.71e-75;3!UBERON:0005425;7.62e-26;1!UBERON:0006241;1.53e-09;3!UBERON:0003056;1.53e-09;3!UBERON:0003057;1.53e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;7.62e-26;1!DOID:3350;1.21e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,9.79e-26,1;DOID:3350,1.37e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.59e-79!57;UBERON:0005068!2.59e-79!57;UBERON:0006241!2.59e-79!57;UBERON:0007135!2.59e-79!57;UBERON:0005743!7.63e-68!86;UBERON:0002616!1.22e-67!59;UBERON:0003075!2.49e-65!86;UBERON:0007284!2.49e-65!86;UBERON:0000073!6.66e-64!94;UBERON:0001016!6.66e-64!94;UBERON:0002346!5.22e-62!90;UBERON:0001017!2.53e-61!82;UBERON:0000955!5.03e-59!69;UBERON:0006238!5.03e-59!69;UBERON:0002780!8.97e-46!41;UBERON:0001890!8.97e-46!41;UBERON:0006240!8.97e-46!41;UBERON:0003080!1.48e-44!42;UBERON:0001893!2.50e-42!34;UBERON:0002020!4.17e-42!34;UBERON:0003528!4.17e-42!34;UBERON:0003056!4.76e-40!61;UBERON:0002791!1.07e-39!33;UBERON:0003076!4.92e-38!15;UBERON:0003057!4.92e-38!15;UBERON:0004732!1.10e-37!13;UBERON:0000033!1.30e-37!123;UBERON:0001869!8.14e-37!32;UBERON:0000153!1.94e-35!129;UBERON:0007811!1.94e-35!129;UBERON:0007023!4.30e-35!115;UBERON:0004733!3.64e-34!12;UBERON:0002028!3.64e-34!12;UBERON:0007277!3.64e-34!12;UBERON:0004121!3.33e-33!169;UBERON:0000924!3.31e-32!173;UBERON:0006601!3.31e-32!173;UBERON:0002619!4.62e-26!22;UBERON:0001950!1.25e-24!20;UBERON:0002680!2.52e-24!9;UBERON:0001895!2.52e-24!9;UBERON:0010092!2.52e-24!9;UBERON:0002308!1.42e-23!9;UBERON:0000125!1.42e-23!9;UBERON:0000956!1.13e-22!25;UBERON:0000203!1.13e-22!25;UBERON:0002298!1.13e-20!8;UBERON:0002420!1.69e-18!9;UBERON:0007245!1.69e-18!9;UBERON:0010009!1.69e-18!9;UBERON:0010011!1.69e-18!9;UBERON:0000454!1.69e-18!9;UBERON:0000025!2.95e-18!194;UBERON:0009663!7.84e-18!7;UBERON:0002037!1.36e-15!6;UBERON:0006215!1.36e-15!6;UBERON:0000064!5.90e-15!219;UBERON:0000200!2.84e-14!6;UBERON:0000483!1.18e-13!309;UBERON:0000119!2.00e-13!312;UBERON:0004111!6.56e-13!241;UBERON:0001896!1.16e-11!3;UBERON:0005290!1.16e-11!3;UBERON:0010096!1.16e-11!3;UBERON:0002021!1.56e-11!5;UBERON:0005383!3.02e-11!3;UBERON:0005382!3.02e-11!3;UBERON:0006331!7.73e-11!3;UBERON:0000988!1.59e-10!3;UBERON:0000477!3.32e-10!286;UBERON:0000369!1.54e-08!4;UBERON:0002435!1.54e-08!4;UBERON:0000204!1.54e-08!4;UBERON:0010082!1.54e-08!4;UBERON:0000475!1.78e-08!365;UBERON:0005162!2.08e-08!2;UBERON:0000122!2.08e-08!2;UBERON:0001875!4.75e-08!2;UBERON:0006514!4.75e-08!2;UBERON:0001873!5.10e-08!2;UBERON:0010122!5.10e-08!2;UBERON:0002148!1.72e-07!2;UBERON:0009662!1.72e-07!2;UBERON:0001871!6.64e-07!7;UBERON:0000966!9.51e-07!5;UBERON:0005388!9.51e-07!5;UBERON:0001802!9.51e-07!5 | |||
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|short_description=p10@RCN1 | |||
}} |
Revision as of 17:27, 10 September 2013
Short description: | p10@RCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_RCN1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 26bp_to_ENST00000530348_5end |
EntrezGene: | RCN1 |
HGNC: | 9934 |
UniProt: | E9PP27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 9.79e-26 | 1 |
mesenchymal cell neoplasm | 1.37e-13 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.