FFCP PHASE1:Hg19::chr17:8214130..8214149,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22899|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15590|TSSclassifier=S|UniProt=E7ERD8,O94989|association_with_transcript=0bp_to_ENST00000455564,NM_025014,uc002gld.2_5end|coexpression_cluster_id=C140|description=CAGE_peak_2_at_ARHGEF15_5end|id=chr17:8214130..8214149,+|ontology_enrichment_celltype=CL:0002139!4.45e-29!24;CL:0000115!8.27e-27!35;CL:0000071!2.00e-22!18;CL:0002546!2.00e-22!18;CL:0002078!7.23e-19!44;CL:0000213!4.72e-12!57;CL:0000215!4.72e-12!57;CL:1000413!5.65e-12!9;CL:0002543!1.41e-08!6;CL:0002544!1.61e-08!6;CL:0005020!3.41e-08!6;CL:0002138!3.41e-08!6;CL:0005022!3.41e-08!6|ontology_enrichment_celltype_v019=CL:0002139;2.03e-35;24!CL:0000115;1.93e-29;36!CL:0000071;3.16e-27;18!CL:0002078;1.89e-16;45!CL:1000413;2.30e-14;9!CL:0000213;2.37e-11;58!CL:0000215;2.37e-11;58!CL:0002543;3.49e-10;6!CL:0002544;4.03e-10;6!CL:0002138;1.04e-09;6|ontology_enrichment_celltype_v019_2=CL:0002139,2.10e-35,24;CL:0000115,8.61e-35,36;CL:0000071,3.28e-27,18;CL:0002546,3.28e-27,18;CL:0002078,1.61e-25,45;CL:0000213,2.40e-17,58;CL:0000215,2.40e-17,58;CL:1000413,2.35e-14,9;CL:0002543,3.48e-10,6;CL:0002544,4.11e-10,6;CL:0005020,1.03e-09,6;CL:0002138,1.03e-09,6;CL:0005022,1.03e-09,6|ontology_enrichment_development_v019=CL:0002546;3.16e-27;18!CL:0005022;1.04e-09;6!UBERON:0004872;4.45e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.99e-67!115;UBERON:0004111!7.82e-30!241;UBERON:0001049!2.48e-28!57;UBERON:0005068!2.48e-28!57;UBERON:0006241!2.48e-28!57;UBERON:0007135!2.48e-28!57;UBERON:0000025!2.05e-27!194;UBERON:0000477!7.02e-26!286;UBERON:0002616!4.21e-23!59;UBERON:0003080!4.74e-23!42;UBERON:0001986!2.00e-22!18;UBERON:0004638!2.00e-22!18;UBERON:0004852!2.00e-22!18;UBERON:0002780!3.87e-22!41;UBERON:0001890!3.87e-22!41;UBERON:0006240!3.87e-22!41;UBERON:0003075!1.57e-21!86;UBERON:0007284!1.57e-21!86;UBERON:0002346!8.63e-20!90;UBERON:0000955!3.18e-19!69;UBERON:0006238!3.18e-19!69;UBERON:0001017!3.81e-19!82;UBERON:0005743!1.45e-18!86;UBERON:0000487!1.68e-18!22;UBERON:0002020!2.64e-18!34;UBERON:0003528!2.64e-18!34;UBERON:0001893!7.29e-18!34;UBERON:0002791!2.28e-17!33;UBERON:0001869!9.95e-17!32;UBERON:0000073!4.13e-16!94;UBERON:0001016!4.13e-16!94;UBERON:0006914!2.21e-15!25;UBERON:0002619!3.28e-15!22;UBERON:0000483!4.87e-15!309;UBERON:0000119!1.37e-14!312;UBERON:0003056!4.17e-14!61;UBERON:0001950!7.20e-14!20;UBERON:0000956!1.14e-12!25;UBERON:0000203!1.14e-12!25;UBERON:0003915!5.65e-12!9;UBERON:0004700!5.65e-12!9;UBERON:0001917!5.65e-12!9;UBERON:0000153!1.77e-11!129;UBERON:0007811!1.77e-11!129;UBERON:0000468!2.46e-11!659;UBERON:0000055!3.41e-11!69;UBERON:0000467!3.11e-10!625;UBERON:0000033!3.39e-10!123;UBERON:0000480!3.84e-10!626;UBERON:0002049!5.90e-09!79;UBERON:0007798!5.90e-09!79;UBERON:0004121!1.31e-08!169;UBERON:0000064!1.38e-08!219;UBERON:0000922!2.78e-08!612;UBERON:0001981!3.04e-08!60;UBERON:0007500!3.04e-08!60;UBERON:0004537!3.04e-08!60;UBERON:0006965!3.04e-08!60;UBERON:0004872!3.94e-08!84;UBERON:0000924!4.84e-08!173;UBERON:0006601!4.84e-08!173;UBERON:0003914!1.44e-07!118;UBERON:0002298!1.90e-07!8;UBERON:0001009!3.04e-07!113;UBERON:0002308!3.05e-07!9;UBERON:0000125!3.05e-07!9;UBERON:0002465!3.84e-07!10;UBERON:0000481!5.04e-07!347;UBERON:0001638!5.82e-07!9;UBERON:0003920!5.82e-07!9;UBERON:0004582!5.82e-07!9;UBERON:0002420!7.73e-07!9;UBERON:0007245!7.73e-07!9;UBERON:0010009!7.73e-07!9;UBERON:0010011!7.73e-07!9;UBERON:0000454!7.73e-07!9;UBERON:0002050!8.99e-07!605;UBERON:0005423!8.99e-07!605|ontology_enrichment_uberon_v019=UBERON:0004638;3.16e-27;18!UBERON:0001986;3.16e-27;18!UBERON:0004852;3.16e-27;18!UBERON:0000487;4.79e-21;22!UBERON:0006914;9.87e-18;25!UBERON:0003915;2.30e-14;9!UBERON:0004700;2.30e-14;9!UBERON:0001917;2.30e-14;9!UBERON:0002619;4.96e-14;22!UBERON:0003528;1.24e-13;34!UBERON:0002020;1.24e-13;34!UBERON:0007023;2.92e-13;114!UBERON:0002780;4.96e-13;41!UBERON:0001890;4.96e-13;41!UBERON:0001950;1.82e-12;20!UBERON:0001893;1.95e-12;34!UBERON:0002791;1.95e-12;32!UBERON:0000073;2.66e-12;53!UBERON:0002616;2.66e-12;53!UBERON:0000956;8.20e-12;25!UBERON:0000203;8.20e-12;25!UBERON:0001869;1.84e-11;32!UBERON:0000490;4.55e-11;33!UBERON:0002465;1.19e-08;10!UBERON:0001638;1.94e-08;9!UBERON:0003920;1.94e-08;9!UBERON:0004582;1.94e-08;9!UBERON:0000055;3.24e-08;65!UBERON:0000955;5.57e-07;68!UBERON:0001473;5.70e-07;8!UBERON:0004536;5.70e-07;8!UBERON:0006558;5.70e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.14e-57,114;UBERON:0004111,2.57e-28,240;UBERON:0004638,3.28e-27,18;UBERON:0001986,3.28e-27,18;UBERON:0004852,3.28e-27,18;UBERON:0000025,2.17e-25,192;UBERON:0000487,4.93e-21,22;UBERON:0000073,4.85e-20,53;UBERON:0002616,4.85e-20,53;UBERON:0001049,1.13e-19,56;UBERON:0005068,1.13e-19,56;UBERON:0006241,1.13e-19,56;UBERON:0007135,1.13e-19,56;UBERON:0006914,1.01e-17,25;UBERON:0002780,1.60e-17,41;UBERON:0001890,1.60e-17,41;UBERON:0003080,1.60e-17,41;UBERON:0006240,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22899 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15590 | |||
|TSSclassifier=S | |||
|UniProt=E7ERD8,O94989 | |||
|association_with_transcript=0bp_to_ENST00000455564,NM_025014,uc002gld.2_5end | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_2_at_ARHGEF15_5end | |||
|id=chr17:8214130..8214149,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.45e-29!24;CL:0000115!8.27e-27!35;CL:0000071!2.00e-22!18;CL:0002546!2.00e-22!18;CL:0002078!7.23e-19!44;CL:0000213!4.72e-12!57;CL:0000215!4.72e-12!57;CL:1000413!5.65e-12!9;CL:0002543!1.41e-08!6;CL:0002544!1.61e-08!6;CL:0005020!3.41e-08!6;CL:0002138!3.41e-08!6;CL:0005022!3.41e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.03e-35;24!CL:0000115;1.93e-29;36!CL:0000071;3.16e-27;18!CL:0002078;1.89e-16;45!CL:1000413;2.30e-14;9!CL:0000213;2.37e-11;58!CL:0000215;2.37e-11;58!CL:0002543;3.49e-10;6!CL:0002544;4.03e-10;6!CL:0002138;1.04e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.10e-35,24;CL:0000115,8.61e-35,36;CL:0000071,3.28e-27,18;CL:0002546,3.28e-27,18;CL:0002078,1.61e-25,45;CL:0000213,2.40e-17,58;CL:0000215,2.40e-17,58;CL:1000413,2.35e-14,9;CL:0002543,3.48e-10,6;CL:0002544,4.11e-10,6;CL:0005020,1.03e-09,6;CL:0002138,1.03e-09,6;CL:0005022,1.03e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.16e-27;18!CL:0005022;1.04e-09;6!UBERON:0004872;4.45e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@ARHGEF15 | |||
}} |
Revision as of 16:42, 11 September 2013
Short description: | p2@ARHGEF15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ARHGEF15_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000455564, NM_025014, uc002gld.2_5end |
EntrezGene: | ARHGEF15 |
HGNC: | 15590 |
UniProt: | E7ERD8O94989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.10e-35 | 24 |
endothelial cell | 8.61e-35 | 36 |
blood vessel endothelial cell | 3.28e-27 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.28e-27 | 18 |
meso-epithelial cell | 1.61e-25 | 45 |
lining cell | 2.40e-17 | 58 |
barrier cell | 2.40e-17 | 58 |
endothelial cell of artery | 2.35e-14 | 9 |
vein endothelial cell | 3.48e-10 | 6 |
aortic endothelial cell | 4.11e-10 | 6 |
lymphangioblast | 1.03e-09 | 6 |
endothelial cell of lymphatic vessel | 1.03e-09 | 6 |
vascular lymphangioblast | 1.03e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.