FFCP PHASE1:Hg19::chr19:34756467..34756506,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9710|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29016|TSSclassifier=W|UniProt=|association_with_transcript=4bp_to_uc010edk.1_5end|coexpression_cluster_id=C2448|description=CAGE_peak_2_at_KIAA0355_5end|id=chr19:34756467..34756506,+|ontology_enrichment_celltype=CL:0002139!2.60e-24!24;CL:0000115!8.83e-20!35;CL:0000071!2.92e-18!18;CL:0002546!2.92e-18!18;CL:0002078!9.93e-16!44;CL:1000413!7.47e-11!9;CL:0000213!5.04e-09!57;CL:0000215!5.04e-09!57;CL:0002544!9.44e-08!6;CL:0005020!1.31e-07!6;CL:0002138!1.31e-07!6;CL:0005022!1.31e-07!6|ontology_enrichment_celltype_v019=CL:0002139;9.31e-32;24!CL:0000115;5.29e-24;36!CL:0000071;1.04e-23;18!CL:0002078;5.57e-14;45!CL:1000413;6.43e-14;9!CL:0002544;8.29e-10;6!CL:0002138;1.37e-09;6!CL:0000213;3.83e-09;58!CL:0000215;3.83e-09;58!CL:0002543;3.38e-08;6|ontology_enrichment_celltype_v019_2=CL:0002139,8.46e-32,24;CL:0000115,3.67e-28,36;CL:0000071,9.60e-24,18;CL:0002546,9.60e-24,18;CL:0002078,1.47e-20,45;CL:1000413,6.75e-14,9;CL:0000213,7.05e-14,58;CL:0000215,7.05e-14,58;CL:0002544,8.76e-10,6;CL:0005020,1.35e-09,6;CL:0002138,1.35e-09,6;CL:0005022,1.35e-09,6;CL:0002543,3.14e-08,6|ontology_enrichment_development_v019=CL:0002546;1.04e-23;18!CL:0005022;1.37e-09;6!UBERON:0006601;1.58e-08;82!UBERON:0004872;1.72e-08;7!UBERON:0006603;2.97e-08;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.93e-70!115;UBERON:0001049!2.86e-27!57;UBERON:0005068!2.86e-27!57;UBERON:0006241!2.86e-27!57;UBERON:0007135!2.86e-27!57;UBERON:0002346!2.65e-24!90;UBERON:0003075!1.65e-23!86;UBERON:0007284!1.65e-23!86;UBERON:0004111!2.97e-23!241;UBERON:0002616!1.01e-21!59;UBERON:0003080!2.01e-21!42;UBERON:0005743!3.29e-21!86;UBERON:0000477!5.37e-21!286;UBERON:0002780!1.99e-20!41;UBERON:0001890!1.99e-20!41;UBERON:0006240!1.99e-20!41;UBERON:0000025!2.09e-20!194;UBERON:0001017!5.74e-20!82;UBERON:0000955!8.15e-19!69;UBERON:0006238!8.15e-19!69;UBERON:0000073!1.87e-18!94;UBERON:0001016!1.87e-18!94;UBERON:0001986!2.92e-18!18;UBERON:0004638!2.92e-18!18;UBERON:0004852!2.92e-18!18;UBERON:0002020!9.27e-17!34;UBERON:0003528!9.27e-17!34;UBERON:0001893!2.15e-16!34;UBERON:0003056!2.22e-16!61;UBERON:0002791!8.14e-16!33;UBERON:0001869!2.53e-15!32;UBERON:0000487!4.74e-15!22;UBERON:0000153!5.11e-15!129;UBERON:0007811!5.11e-15!129;UBERON:0000483!1.68e-13!309;UBERON:0002619!2.05e-13!22;UBERON:0000924!3.49e-13!173;UBERON:0006601!3.49e-13!173;UBERON:0000119!4.50e-13!312;UBERON:0000033!4.65e-13!123;UBERON:0000468!9.95e-13!659;UBERON:0004121!1.78e-12!169;UBERON:0006914!1.99e-12!25;UBERON:0001950!4.15e-12!20;UBERON:0000956!4.07e-11!25;UBERON:0000203!4.07e-11!25;UBERON:0003915!7.47e-11!9;UBERON:0004700!7.47e-11!9;UBERON:0001917!7.47e-11!9;UBERON:0000922!3.34e-10!612;UBERON:0000467!6.67e-10!625;UBERON:0000480!8.26e-10!626;UBERON:0000064!2.84e-09!219;UBERON:0003135!1.11e-08!11;UBERON:0002050!4.58e-08!605;UBERON:0005423!4.58e-08!605;UBERON:0000055!6.57e-08!69;UBERON:0000923!1.11e-07!604;UBERON:0005291!1.11e-07!604;UBERON:0006598!1.11e-07!604;UBERON:0002532!1.11e-07!604;UBERON:0002298!1.83e-07!8;UBERON:0002308!2.18e-07!9;UBERON:0000125!2.18e-07!9;UBERON:0002420!2.84e-07!9;UBERON:0007245!2.84e-07!9;UBERON:0010009!2.84e-07!9;UBERON:0010011!2.84e-07!9;UBERON:0000454!2.84e-07!9;UBERON:0003076!4.65e-07!15;UBERON:0003057!4.65e-07!15|ontology_enrichment_uberon_v019=UBERON:0004638;1.04e-23;18!UBERON:0001986;1.04e-23;18!UBERON:0004852;1.04e-23;18!UBERON:0000487;2.54e-18;22!UBERON:0007023;3.54e-16;114!UBERON:0006914;1.96e-15;25!UBERON:0003528;1.21e-14;34!UBERON:0002020;1.21e-14;34!UBERON:0002619;1.24e-14;22!UBERON:0001869;3.03e-14;32!UBERON:0002791;3.38e-14;32!UBERON:0003915;6.43e-14;9!UBERON:0004700;6.43e-14;9!UBERON:0001917;6.43e-14;9!UBERON:0001893;2.32e-13;34!UBERON:0001950;6.40e-13;20!UBERON:0000956;2.34e-12;25!UBERON:0000203;2.34e-12;25!UBERON:0002780;9.36e-11;41!UBERON:0001890;9.36e-11;41!UBERON:0000490;1.23e-09;33!UBERON:0003135;1.57e-09;11!UBERON:0000073;4.19e-09;53!UBERON:0002616;4.19e-09;53!UBERON:0002465;1.32e-08;10!UBERON:0000922;9.33e-08;49!UBERON:0002298;3.40e-07;6!UBERON:0001638;3.82e-07;9!UBERON:0003920;3.82e-07;9!UBERON:0004582;3.82e-07;9!UBERON:0001473;6.58e-07;8!UBERON:0004536;6.58e-07;8!UBERON:0006558;6.58e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.51e-65,114;UBERON:0004111,5.30e-24,240;UBERON:0004638,9.60e-24,18;UBERON:0001986,9.60e-24,18;UBERON:0004852,9.60e-24,18;UBERON:0000025,1.30e-20,192;UBERON:0001049,1.38e-19,56;UBERON:0005068,1.38e-19,56;UBERON:0006241,1.38e-19,56;UBERON:0007135,1.38e-19,56;UBERON:0000487,2.38e-18,22;UBERON:0000073,2.44e-18,53;UBERON:0002616,2.44e-18,53;UBERON:0003528,9.64e-17,34;UBERON:0002020,9.64e-17,34;UBERON:0003075,1.76e-15,82;UBERON:0007284,1.76e-15,82;UBERON:0006914,1.86e-15,25;UBERON:0002780,2.58e-15,41;UBERON:0001890,2.58e-15,41;UBERON:0003080,2.58e-15,41;UBERON:0006240,2.58e-15,41;UBERON:0001893,5.03e-15,34;UBERON:0001869,5.78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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29016 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=4bp_to_uc010edk.1_5end | |||
|coexpression_cluster_id=C2448 | |||
|description=CAGE_peak_2_at_KIAA0355_5end | |||
|id=chr19:34756467..34756506,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.60e-24!24;CL:0000115!8.83e-20!35;CL:0000071!2.92e-18!18;CL:0002546!2.92e-18!18;CL:0002078!9.93e-16!44;CL:1000413!7.47e-11!9;CL:0000213!5.04e-09!57;CL:0000215!5.04e-09!57;CL:0002544!9.44e-08!6;CL:0005020!1.31e-07!6;CL:0002138!1.31e-07!6;CL:0005022!1.31e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.31e-32;24!CL:0000115;5.29e-24;36!CL:0000071;1.04e-23;18!CL:0002078;5.57e-14;45!CL:1000413;6.43e-14;9!CL:0002544;8.29e-10;6!CL:0002138;1.37e-09;6!CL:0000213;3.83e-09;58!CL:0000215;3.83e-09;58!CL:0002543;3.38e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.46e-32,24;CL:0000115,3.67e-28,36;CL:0000071,9.60e-24,18;CL:0002546,9.60e-24,18;CL:0002078,1.47e-20,45;CL:1000413,6.75e-14,9;CL:0000213,7.05e-14,58;CL:0000215,7.05e-14,58;CL:0002544,8.76e-10,6;CL:0005020,1.35e-09,6;CL:0002138,1.35e-09,6;CL:0005022,1.35e-09,6;CL:0002543,3.14e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.04e-23;18!CL:0005022;1.37e-09;6!UBERON:0006601;1.58e-08;82!UBERON:0004872;1.72e-08;7!UBERON:0006603;2.97e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;1.04e-23;18!UBERON:0001986;1.04e-23;18!UBERON:0004852;1.04e-23;18!UBERON:0000487;2.54e-18;22!UBERON:0007023;3.54e-16;114!UBERON:0006914;1.96e-15;25!UBERON:0003528;1.21e-14;34!UBERON:0002020;1.21e-14;34!UBERON:0002619;1.24e-14;22!UBERON:0001869;3.03e-14;32!UBERON:0002791;3.38e-14;32!UBERON:0003915;6.43e-14;9!UBERON:0004700;6.43e-14;9!UBERON:0001917;6.43e-14;9!UBERON:0001893;2.32e-13;34!UBERON:0001950;6.40e-13;20!UBERON:0000956;2.34e-12;25!UBERON:0000203;2.34e-12;25!UBERON:0002780;9.36e-11;41!UBERON:0001890;9.36e-11;41!UBERON:0000490;1.23e-09;33!UBERON:0003135;1.57e-09;11!UBERON:0000073;4.19e-09;53!UBERON:0002616;4.19e-09;53!UBERON:0002465;1.32e-08;10!UBERON:0000922;9.33e-08;49!UBERON:0002298;3.40e-07;6!UBERON:0001638;3.82e-07;9!UBERON:0003920;3.82e-07;9!UBERON:0004582;3.82e-07;9!UBERON:0001473;6.58e-07;8!UBERON:0004536;6.58e-07;8!UBERON:0006558;6.58e-07;8 | |||
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| |||
|short_description=p2@KIAA0355 | |||
}} |
Revision as of 20:00, 11 September 2013
Short description: | p2@KIAA0355 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KIAA0355_5end |
Coexpression cluster: | C2448_lung_heart_adipose_uterus_spleen_penis_diaphragm |
Association with transcript: | 4bp_to_uc010edk.1_5end |
EntrezGene: | KIAA0355 |
HGNC: | 29016 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.46e-32 | 24 |
endothelial cell | 3.67e-28 | 36 |
blood vessel endothelial cell | 9.60e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.60e-24 | 18 |
meso-epithelial cell | 1.47e-20 | 45 |
endothelial cell of artery | 6.75e-14 | 9 |
lining cell | 7.05e-14 | 58 |
barrier cell | 7.05e-14 | 58 |
aortic endothelial cell | 8.76e-10 | 6 |
lymphangioblast | 1.35e-09 | 6 |
endothelial cell of lymphatic vessel | 1.35e-09 | 6 |
vascular lymphangioblast | 1.35e-09 | 6 |
vein endothelial cell | 3.14e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.