FFCP PHASE1:Mm9::chr11:68947637..68947666,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23801|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=-152bp_to_ENSMUST00000156874_5end|description=CAGE_peak_3_at_Aloxe3_5end|id=chr11:68947637..68947666,+|ontology_enrichment_celltype=CL:0000117!5.55e-11!23;CL:0000337!5.55e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.35e-18,23;CL:0000337,3.35e-18,23;CL:0000540,2.65e-11,33;CL:0000047,2.65e-11,33;CL:0000031,2.65e-11,33;CL:0000404,2.65e-11,33;CL:0000393,6.78e-09,39;CL:0000211,6.78e-09,39;CL:0000221,2.19e-08,44;CL:0000133,2.19e-08,44;CL:0002319,1.12e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.00e-22!52;UBERON:0005068!3.00e-22!52;UBERON:0006241!3.00e-22!52;UBERON:0007135!3.00e-22!52;UBERON:0000033!1.38e-20!63;UBERON:0000955!1.87e-20!50;UBERON:0006238!1.87e-20!50;UBERON:0002616!5.25e-20!49;UBERON:0003080!4.30e-18!40;UBERON:0003056!7.34e-18!49;UBERON:0002780!1.54e-17!39;UBERON:0001890!1.54e-17!39;UBERON:0006240!1.54e-17!39;UBERON:0002346!1.64e-17!71;UBERON:0003075!1.64e-17!71;UBERON:0007284!1.64e-17!71;UBERON:0002020!4.27e-17!34;UBERON:0001017!4.62e-17!73;UBERON:0005743!4.62e-17!73;UBERON:0000073!7.67e-16!75;UBERON:0001016!7.67e-16!75;UBERON:0004121!1.49e-14!102;UBERON:0000924!1.49e-14!102;UBERON:0006601!1.49e-14!102;UBERON:0002791!1.51e-13!29;UBERON:0003528!1.51e-13!29;UBERON:0001893!1.51e-13!29;UBERON:0000153!2.21e-13!94;UBERON:0007811!2.54e-13!86;UBERON:0002619!3.41e-09!17;UBERON:0000956!1.09e-08!21;UBERON:0001869!1.09e-08!21;UBERON:0000203!1.09e-08!21;UBERON:0002021!5.50e-08!10;UBERON:0000411!5.50e-08!10;UBERON:0001950!5.50e-08!10;UBERON:0004111!8.39e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.46e-39,54;UBERON:0001049,2.72e-36,52;UBERON:0005068,2.72e-36,52;UBERON:0006241,2.72e-36,52;UBERON:0007135,2.72e-36,52;UBERON:0002020,5.98e-33,34;UBERON:0001017,1.78e-31,73;UBERON:0001016,2.36e-30,75;UBERON:0002346,1.73e-29,64;UBERON:0003075,1.73e-29,64;UBERON:0007284,1.73e-29,64;UBERON:0003080,8.72e-28,40;UBERON:0002616,3.12e-27,46;UBERON:0002780,1.48e-26,39;UBERON:0001890,1.48e-26,39;UBERON:0006240,1.48e-26,39;UBERON:0000955,1.79e-26,47;UBERON:0006238,1.79e-26,47;UBERON:0010371,3.81e-26,73;UBERON:0003528,1.07e-24,29;UBERON:0002791,1.07e-24,29;UBERON:0001893,1.07e-24,29;UBERON:0004121,1.88e-24,95;UBERON:0000924,1.88e-24,95;UBERON:0006601,1.88e-24,95;UBERON:0003056,4.95e-23,49;UBERON:0010314,1.13e-18,92;UBERON:0002021,3.68e-17,10;UBERON:0000411,3.68e-17,10;UBERON:0001950,3.68e-17,10;UBERON:0002619,4.35e-15,17;UBERON:0004111,7.31e-15,122;UBERON:0000956,1.22e-13,21;UBERON:0001869,1.22e-13,21;UBERON:0000203,1.22e-13,21;UBERON:0000025,2.81e-13,114;UBERON:0002420,2.94e-13,8;UBERON:0007245,2.94e-13,8;UBERON:0010009,2.94e-13,8;UBERON:0010011,2.94e-13,8;UBERON:0000454,2.94e-13,8;UBERON:0002240,6.40e-11,6;UBERON:0005174,6.40e-11,6;UBERON:0001137,6.40e-11,6;UBERON:0001948,6.69e-10,5;UBERON:0002315,6.69e-10,5;UBERON:0000369,6.01e-09,5;UBERON:0002435,6.01e-09,5;UBERON:0000204,6.01e-09,5;UBERON:0010082,6.01e-09,5;UBERON:0003076,1.29e-08,12;UBERON:0003057,1.29e-08,12;UBERON:0000483,2.87e-07,174;UBERON:0011216,3.25e-07,194;UBERON:0000119,4.50e-07,176;UBERON:0002950,4.55e-07,4;UBERON:0001891,4.55e-07,4;UBERON:0009616,4.55e-07,4;UBERON:0010286,4.55e-07,4|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.405017814995072,0,2.85650984403804,4.63823935998388,0.489963196859816,0.670918297127655,1.83843757322004,2.20231761998777,2.042997409363,2.15049146558741,1.71452174049252,1.37231465403614,2.6045668527838,2.79182999001381,2.25105044012672,1.37518422999129,4.12480019663135,4.41352210477219,1.86399445825301,0,0,1.44932244350839,0,0,0,0,0,0,0,0.259786004602869,0,1.12674735821344,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.258937883647172,0.593768556259299,0,0,0,0,0.470354828542819,0.251333182659351,0,0,0,0.161766849947409,0,0,0,2.63502717310392,1.67557365450764,0,0,0,0,1.3481157546434,2.28750301409313,5.02617408451458,2.43354048269187,1.27857728665165,1.0389402227978,0.648965052271031,0.712875546952214,0.497627882440372,2.27450482590307,1.68353484709179,0.260240885925407,0.229902104433473,0,0.30140963567143,0.204109497453984,0.640568601424249,0.187403449119458,0.776110112217047,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,1.02891068203972,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,1.44066457330998,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.1991412732543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| ||
|EntrezGene=23801 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt= | |||
|association_with_transcript=-152bp_to_ENSMUST00000156874_5end | |||
|description=CAGE_peak_3_at_Aloxe3_5end | |||
|id=chr11:68947637..68947666,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.55e-11!23;CL:0000337!5.55e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.35e-18,23;CL:0000337,3.35e-18,23;CL:0000540,2.65e-11,33;CL:0000047,2.65e-11,33;CL:0000031,2.65e-11,33;CL:0000404,2.65e-11,33;CL:0000393,6.78e-09,39;CL:0000211,6.78e-09,39;CL:0000221,2.19e-08,44;CL:0000133,2.19e-08,44;CL:0002319,1.12e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.00e-22!52;UBERON:0005068!3.00e-22!52;UBERON:0006241!3.00e-22!52;UBERON:0007135!3.00e-22!52;UBERON:0000033!1.38e-20!63;UBERON:0000955!1.87e-20!50;UBERON:0006238!1.87e-20!50;UBERON:0002616!5.25e-20!49;UBERON:0003080!4.30e-18!40;UBERON:0003056!7.34e-18!49;UBERON:0002780!1.54e-17!39;UBERON:0001890!1.54e-17!39;UBERON:0006240!1.54e-17!39;UBERON:0002346!1.64e-17!71;UBERON:0003075!1.64e-17!71;UBERON:0007284!1.64e-17!71;UBERON:0002020!4.27e-17!34;UBERON:0001017!4.62e-17!73;UBERON:0005743!4.62e-17!73;UBERON:0000073!7.67e-16!75;UBERON:0001016!7.67e-16!75;UBERON:0004121!1.49e-14!102;UBERON:0000924!1.49e-14!102;UBERON:0006601!1.49e-14!102;UBERON:0002791!1.51e-13!29;UBERON:0003528!1.51e-13!29;UBERON:0001893!1.51e-13!29;UBERON:0000153!2.21e-13!94;UBERON:0007811!2.54e-13!86;UBERON:0002619!3.41e-09!17;UBERON:0000956!1.09e-08!21;UBERON:0001869!1.09e-08!21;UBERON:0000203!1.09e-08!21;UBERON:0002021!5.50e-08!10;UBERON:0000411!5.50e-08!10;UBERON:0001950!5.50e-08!10;UBERON:0004111!8.39e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.46e-39,54;UBERON:0001049,2.72e-36,52;UBERON:0005068,2.72e-36,52;UBERON:0006241,2.72e-36,52;UBERON:0007135,2.72e-36,52;UBERON:0002020,5.98e-33,34;UBERON:0001017,1.78e-31,73;UBERON:0001016,2.36e-30,75;UBERON:0002346,1.73e-29,64;UBERON:0003075,1.73e-29,64;UBERON:0007284,1.73e-29,64;UBERON:0003080,8.72e-28,40;UBERON:0002616,3.12e-27,46;UBERON:0002780,1.48e-26,39;UBERON:0001890,1.48e-26,39;UBERON:0006240,1.48e-26,39;UBERON:0000955,1.79e-26,47;UBERON:0006238,1.79e-26,47;UBERON:0010371,3.81e-26,73;UBERON:0003528,1.07e-24,29;UBERON:0002791,1.07e-24,29;UBERON:0001893,1.07e-24,29;UBERON:0004121,1.88e-24,95;UBERON:0000924,1.88e-24,95;UBERON:0006601,1.88e-24,95;UBERON:0003056,4.95e-23,49;UBERON:0010314,1.13e-18,92;UBERON:0002021,3.68e-17,10;UBERON:0000411,3.68e-17,10;UBERON:0001950,3.68e-17,10;UBERON:0002619,4.35e-15,17;UBERON:0004111,7.31e-15,122;UBERON:0000956,1.22e-13,21;UBERON:0001869,1.22e-13,21;UBERON:0000203,1.22e-13,21;UBERON:0000025,2.81e-13,114;UBERON:0002420,2.94e-13,8;UBERON:0007245,2.94e-13,8;UBERON:0010009,2.94e-13,8;UBERON:0010011,2.94e-13,8;UBERON:0000454,2.94e-13,8;UBERON:0002240,6.40e-11,6;UBERON:0005174,6.40e-11,6;UBERON:0001137,6.40e-11,6;UBERON:0001948,6.69e-10,5;UBERON:0002315,6.69e-10,5;UBERON:0000369,6.01e-09,5;UBERON:0002435,6.01e-09,5;UBERON:0000204,6.01e-09,5;UBERON:0010082,6.01e-09,5;UBERON:0003076,1.29e-08,12;UBERON:0003057,1.29e-08,12;UBERON:0000483,2.87e-07,174;UBERON:0011216,3.25e-07,194;UBERON:0000119,4.50e-07,176;UBERON:0002950,4.55e-07,4;UBERON:0001891,4.55e-07,4;UBERON:0009616,4.55e-07,4;UBERON:0010286,4.55e-07,4 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.405017814995072,0,2.85650984403804,4.63823935998388,0.489963196859816,0.670918297127655,1.83843757322004,2.20231761998777,2.042997409363,2.15049146558741,1.71452174049252,1.37231465403614,2.6045668527838,2.79182999001381,2.25105044012672,1.37518422999129,4.12480019663135,4.41352210477219,1.86399445825301,0,0,1.44932244350839,0,0,0,0,0,0,0,0.259786004602869,0,1.12674735821344,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.258937883647172,0.593768556259299,0,0,0,0,0.470354828542819,0.251333182659351,0,0,0,0.161766849947409,0,0,0,2.63502717310392,1.67557365450764,0,0,0,0,1.3481157546434,2.28750301409313,5.02617408451458,2.43354048269187,1.27857728665165,1.0389402227978,0.648965052271031,0.712875546952214,0.497627882440372,2.27450482590307,1.68353484709179,0.260240885925407,0.229902104433473,0,0.30140963567143,0.204109497453984,0.640568601424249,0.187403449119458,0.776110112217047,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,1.02891068203972,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,1.44066457330998,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.49095073923223,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.567760340833074,0.712262414669021,0.977321756121456,0.824850614862677,1.32745138339963,0.971122544619926,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.948110273807448,0,0,5.44703369206061,0.18006109403131,1.03486947026204,0.857348140126369,0.532020700926821,0.891844088010353,1.31639216481697,4.26250928760439,0.23467170806371,0.21183207086382,4.41056796109924,0.32977250588296,0.645857706783622,0.361877549568935,0.477489376012546,0.164140899745061,0,1.11255181206306,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0,0,0.158167996790568,0,0.648032044930808,0,0.436725127492355,0.539457385539283,0.41326727862668,0.785267825952089,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,1.5256441023948,0.781226309063701,1.25831213310853,0.966336483304024,0.864090018773596,0.316011120628178,0.608175645870493,0.718976700153791,0.51968329191118,0.179026695667481,0.198681354781265,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,0.221985953374065,0,0.503653849092235,0,0,0.36630324853453,0.428736758158132,4.01257683228291,1.6942555278512,2.76195141904306,1.71868654031819,1.89038500578056,2.74033007908257,3.7769694869485,2.70009000092722,5.40385443869065,3.17199686288943,2.5888015587591,0.103787347584177,0.399024873401031,0.341467211508268,0,0.419226325255965,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.561849044819294,0.640251524048693,0.402048282689293,0.476293691283074,0.115884325944855,0,0,0.441596760403192,0.342869252385415,0,0,0.581385666529314,0.376437521661322,0.25384382367503,1.09756783723664,0.526139422875686,0.271608227691724,0.561142271657738,0.355905054372522,0.591026894253381,0,0,0.385813221962283,0.999242311751784,0.233931608445408,1.07435527024149,1.14772999241306,0,0.231867835620421 | |||
|short_description=p3@Aloxe3 | |||
}} |
Revision as of 20:33, 12 September 2013
Short description: | p3@Aloxe3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Aloxe3_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -152bp_to_ENSMUST00000156874_5end |
EntrezGene: | Aloxe3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.35e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.35e-18 | 23 |
neuron | 2.65e-11 | 33 |
neuronal stem cell | 2.65e-11 | 33 |
neuroblast | 2.65e-11 | 33 |
electrically signaling cell | 2.65e-11 | 33 |
electrically responsive cell | 6.78e-09 | 39 |
electrically active cell | 6.78e-09 | 39 |
ectodermal cell | 2.19e-08 | 44 |
neurectodermal cell | 2.19e-08 | 44 |
neural cell | 1.12e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.