FFCP PHASE1:Mm9::chr15:88890498..88890530,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=406218|HGNC=|MCL_coexpression_id=1|UniProt=Q6IMP4|association_with_transcript=321bp_to_ENSMUST00000162424_5end|description=CAGE_peak_2_at_Panx2_5end|id=chr15:88890498..88890530,+|ontology_enrichment_celltype=CL:0000117!5.41e-16!23;CL:0000337!5.41e-16!23;CL:0000540!2.52e-11!33;CL:0000047!2.52e-11!33;CL:0000031!2.52e-11!33;CL:0000404!2.52e-11!33;CL:0000393!7.75e-08!39;CL:0000211!7.75e-08!39;CL:0000221!1.67e-07!44;CL:0000133!1.67e-07!44;CL:0002319!3.79e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,9.88e-27,23;CL:0000337,9.88e-27,23;CL:0000540,1.04e-16,33;CL:0000047,1.04e-16,33;CL:0000031,1.04e-16,33;CL:0000404,1.04e-16,33;CL:0000393,3.35e-13,39;CL:0000211,3.35e-13,39;CL:0002319,2.02e-11,43;CL:0000221,4.98e-11,44;CL:0000133,4.98e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.29e-29!71;UBERON:0003075!6.29e-29!71;UBERON:0007284!6.29e-29!71;UBERON:0001049!1.06e-25!52;UBERON:0005068!1.06e-25!52;UBERON:0006241!1.06e-25!52;UBERON:0007135!1.06e-25!52;UBERON:0000033!2.32e-25!63;UBERON:0001017!6.73e-25!73;UBERON:0005743!6.73e-25!73;UBERON:0000955!7.60e-24!50;UBERON:0006238!7.60e-24!50;UBERON:0000073!1.76e-23!75;UBERON:0001016!1.76e-23!75;UBERON:0002616!4.60e-23!49;UBERON:0004121!7.86e-22!102;UBERON:0000924!7.86e-22!102;UBERON:0006601!7.86e-22!102;UBERON:0003056!3.61e-21!49;UBERON:0002020!5.81e-19!34;UBERON:0003080!1.53e-18!40;UBERON:0002780!9.36e-18!39;UBERON:0001890!9.36e-18!39;UBERON:0006240!9.36e-18!39;UBERON:0002791!7.10e-15!29;UBERON:0003528!7.10e-15!29;UBERON:0001893!7.10e-15!29;UBERON:0007811!4.37e-12!86;UBERON:0000153!3.32e-11!94;UBERON:0000025!2.66e-10!114;UBERON:0000956!2.42e-09!21;UBERON:0001869!2.42e-09!21;UBERON:0000203!2.42e-09!21;UBERON:0004111!5.26e-09!122;UBERON:0003076!1.01e-07!12;UBERON:0003057!1.01e-07!12;UBERON:0002619!1.39e-07!17;UBERON:0002021!3.99e-07!10;UBERON:0000411!3.99e-07!10;UBERON:0001950!3.99e-07!10;UBERON:0002420!4.34e-07!8;UBERON:0007245!4.34e-07!8;UBERON:0010009!4.34e-07!8;UBERON:0010011!4.34e-07!8;UBERON:0000454!4.34e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.56e-45,54;UBERON:0001049,2.99e-42,52;UBERON:0005068,2.99e-42,52;UBERON:0006241,2.99e-42,52;UBERON:0007135,2.99e-42,52;UBERON:0001017,2.18e-40,73;UBERON:0001016,5.72e-39,75;UBERON:0002346,1.36e-35,64;UBERON:0003075,1.36e-35,64;UBERON:0007284,1.36e-35,64;UBERON:0002020,1.94e-34,34;UBERON:0000955,3.64e-34,47;UBERON:0006238,3.64e-34,47;UBERON:0002616,1.03e-32,46;UBERON:0004121,8.10e-31,95;UBERON:0000924,8.10e-31,95;UBERON:0006601,8.10e-31,95;UBERON:0010371,9.65e-30,73;UBERON:0003080,1.07e-28,40;UBERON:0002780,3.26e-27,39;UBERON:0001890,3.26e-27,39;UBERON:0006240,3.26e-27,39;UBERON:0003528,2.48e-26,29;UBERON:0002791,2.48e-26,29;UBERON:0001893,2.48e-26,29;UBERON:0010314,2.99e-26,92;UBERON:0003056,5.95e-25,49;UBERON:0000025,8.30e-17,114;UBERON:0000956,1.89e-15,21;UBERON:0001869,1.89e-15,21;UBERON:0000203,1.89e-15,21;UBERON:0004111,6.30e-15,122;UBERON:0002619,1.45e-13,17;UBERON:0003076,1.53e-13,12;UBERON:0003057,1.53e-13,12;UBERON:0002021,1.02e-12,10;UBERON:0000411,1.02e-12,10;UBERON:0001950,1.02e-12,10;UBERON:0002420,1.20e-12,8;UBERON:0007245,1.20e-12,8;UBERON:0010009,1.20e-12,8;UBERON:0010011,1.20e-12,8;UBERON:0000454,1.20e-12,8;UBERON:0002240,7.19e-11,6;UBERON:0005174,7.19e-11,6;UBERON:0001137,7.19e-11,6;UBERON:0001948,1.48e-09,5;UBERON:0002315,1.48e-09,5;UBERON:0000483,3.62e-08,174;UBERON:0000369,4.25e-08,5;UBERON:0002435,4.25e-08,5;UBERON:0000204,4.25e-08,5;UBERON:0010082,4.25e-08,5;UBERON:0000119,6.07e-08,176;UBERON:0002950,1.15e-07,4;UBERON:0001891,1.15e-07,4;UBERON:0009616,1.15e-07,4;UBERON:0010286,1.15e-07,4;UBERON:0011216,2.33e-07,194|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.64169629547276,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.03689612308478,0.810035629990144,1.05162480675691,8.2838785477103,8.61387309711293,1.34739879136449,0.479227355091182,1.83843757322004,6.60695285996332,4.72443150915195,5.22262213071228,3.29715719325485,3.93396867490361,3.12548022334056,7.53794097303729,4.50210088025344,7.18151764551008,7.07108605136802,7.97281412474976,5.59198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0.913396434936424,0.922461989024234,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,7.90508151931177,5.86450779077674,0,0,0,0,6.29120685500255,5.94750783664214,3.14135880282161,3.12883776346098,1.27857728665165,6.2336413367868,3.73154905055843,0.101839363850316,0,0.758168275301024,0.631325567659422,0.910843100738926,0.459804208866946,0.360124259610698,0.30140963567143,0.680364991513279,1.0249097622788,0.937017245597288,1.55222022443409,0,0.378212160335639,0.527853372491847,0.219195732427575,0.278047249225598,0,0,0,0,0,0,1.24275463521301,0.938104239924385,2.34080679899319,0.710234206755631,1.37734962223183,0.925602677324269,0.930135779001631,0.536546802799238,0.583826711835847,1.15191894939436,0.492502392237286,0.162137619091711,0.146199987425332,0.219550115291051,0,8.41159794256509,1.3377599609307,0,0,0.213288250535234,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.339490171550376,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0,0,0,0,0,0,0,0,5.29816946959713,4.10240903072711,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0,5.14114106274891,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0.340439605753788,0.540183282093931,1.16422815404479,0,0.532020700926821,1.60531935841864,0.822745103010605,2.13125464380219,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0.436725127492355,0.134864346384821,0.41326727862668,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.0897138566094757,0,0,0,0.183151624267265,0,0,1.6942555278512,1.84130094602871,2.86447756719698,3.26521046453006,2.74033007908257,1.5107877947794,3.37511250115903,2.2516060161211,3.17199686288943,1.55328093525546,0,0.399024873401031,0.853668028770671,0.486213434136588,1.25767897576789,0.551530525350042,0.666740183404846,0.824140228955577,0.64183841918363,1.26348605881899,0.760437899670719,0.943131706930381,0.561849044819294,0.704276676453562,0.918967503289812,1.90517476513229,0.695305955669133,0.77163688185482,0.412085900803307,0.735994600671987,0.342869252385415,0.887379030796687,0.953744759789284,0.436039249896986,0.752875043322645,0.423073039458382,0.73171189149109,0.789209134313529,0.950628796921032,2.80571135828869,0.593175090620871,0.197008964751127,0.818462086339379,1.85924209423159,0.192906610981141,2.49810577937946,0.701794825336225,0.429742108096597,0.765153328275374,0.661774257358546,0.231867835620421|short_description=p2@Panx2}} | ||
|EntrezGene=406218 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q6IMP4 | |||
|association_with_transcript=321bp_to_ENSMUST00000162424_5end | |||
|description=CAGE_peak_2_at_Panx2_5end | |||
|id=chr15:88890498..88890530,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.41e-16!23;CL:0000337!5.41e-16!23;CL:0000540!2.52e-11!33;CL:0000047!2.52e-11!33;CL:0000031!2.52e-11!33;CL:0000404!2.52e-11!33;CL:0000393!7.75e-08!39;CL:0000211!7.75e-08!39;CL:0000221!1.67e-07!44;CL:0000133!1.67e-07!44;CL:0002319!3.79e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.88e-27,23;CL:0000337,9.88e-27,23;CL:0000540,1.04e-16,33;CL:0000047,1.04e-16,33;CL:0000031,1.04e-16,33;CL:0000404,1.04e-16,33;CL:0000393,3.35e-13,39;CL:0000211,3.35e-13,39;CL:0002319,2.02e-11,43;CL:0000221,4.98e-11,44;CL:0000133,4.98e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.29e-29!71;UBERON:0003075!6.29e-29!71;UBERON:0007284!6.29e-29!71;UBERON:0001049!1.06e-25!52;UBERON:0005068!1.06e-25!52;UBERON:0006241!1.06e-25!52;UBERON:0007135!1.06e-25!52;UBERON:0000033!2.32e-25!63;UBERON:0001017!6.73e-25!73;UBERON:0005743!6.73e-25!73;UBERON:0000955!7.60e-24!50;UBERON:0006238!7.60e-24!50;UBERON:0000073!1.76e-23!75;UBERON:0001016!1.76e-23!75;UBERON:0002616!4.60e-23!49;UBERON:0004121!7.86e-22!102;UBERON:0000924!7.86e-22!102;UBERON:0006601!7.86e-22!102;UBERON:0003056!3.61e-21!49;UBERON:0002020!5.81e-19!34;UBERON:0003080!1.53e-18!40;UBERON:0002780!9.36e-18!39;UBERON:0001890!9.36e-18!39;UBERON:0006240!9.36e-18!39;UBERON:0002791!7.10e-15!29;UBERON:0003528!7.10e-15!29;UBERON:0001893!7.10e-15!29;UBERON:0007811!4.37e-12!86;UBERON:0000153!3.32e-11!94;UBERON:0000025!2.66e-10!114;UBERON:0000956!2.42e-09!21;UBERON:0001869!2.42e-09!21;UBERON:0000203!2.42e-09!21;UBERON:0004111!5.26e-09!122;UBERON:0003076!1.01e-07!12;UBERON:0003057!1.01e-07!12;UBERON:0002619!1.39e-07!17;UBERON:0002021!3.99e-07!10;UBERON:0000411!3.99e-07!10;UBERON:0001950!3.99e-07!10;UBERON:0002420!4.34e-07!8;UBERON:0007245!4.34e-07!8;UBERON:0010009!4.34e-07!8;UBERON:0010011!4.34e-07!8;UBERON:0000454!4.34e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.56e-45,54;UBERON:0001049,2.99e-42,52;UBERON:0005068,2.99e-42,52;UBERON:0006241,2.99e-42,52;UBERON:0007135,2.99e-42,52;UBERON:0001017,2.18e-40,73;UBERON:0001016,5.72e-39,75;UBERON:0002346,1.36e-35,64;UBERON:0003075,1.36e-35,64;UBERON:0007284,1.36e-35,64;UBERON:0002020,1.94e-34,34;UBERON:0000955,3.64e-34,47;UBERON:0006238,3.64e-34,47;UBERON:0002616,1.03e-32,46;UBERON:0004121,8.10e-31,95;UBERON:0000924,8.10e-31,95;UBERON:0006601,8.10e-31,95;UBERON:0010371,9.65e-30,73;UBERON:0003080,1.07e-28,40;UBERON:0002780,3.26e-27,39;UBERON:0001890,3.26e-27,39;UBERON:0006240,3.26e-27,39;UBERON:0003528,2.48e-26,29;UBERON:0002791,2.48e-26,29;UBERON:0001893,2.48e-26,29;UBERON:0010314,2.99e-26,92;UBERON:0003056,5.95e-25,49;UBERON:0000025,8.30e-17,114;UBERON:0000956,1.89e-15,21;UBERON:0001869,1.89e-15,21;UBERON:0000203,1.89e-15,21;UBERON:0004111,6.30e-15,122;UBERON:0002619,1.45e-13,17;UBERON:0003076,1.53e-13,12;UBERON:0003057,1.53e-13,12;UBERON:0002021,1.02e-12,10;UBERON:0000411,1.02e-12,10;UBERON:0001950,1.02e-12,10;UBERON:0002420,1.20e-12,8;UBERON:0007245,1.20e-12,8;UBERON:0010009,1.20e-12,8;UBERON:0010011,1.20e-12,8;UBERON:0000454,1.20e-12,8;UBERON:0002240,7.19e-11,6;UBERON:0005174,7.19e-11,6;UBERON:0001137,7.19e-11,6;UBERON:0001948,1.48e-09,5;UBERON:0002315,1.48e-09,5;UBERON:0000483,3.62e-08,174;UBERON:0000369,4.25e-08,5;UBERON:0002435,4.25e-08,5;UBERON:0000204,4.25e-08,5;UBERON:0010082,4.25e-08,5;UBERON:0000119,6.07e-08,176;UBERON:0002950,1.15e-07,4;UBERON:0001891,1.15e-07,4;UBERON:0009616,1.15e-07,4;UBERON:0010286,1.15e-07,4;UBERON:0011216,2.33e-07,194 | |||
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|short_description=p2@Panx2 | |||
}} |
Revision as of 11:32, 13 September 2013
Short description: | p2@Panx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Panx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 321bp_to_ENSMUST00000162424_5end |
EntrezGene: | Panx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.88e-27 | 23 |
neuroblast (sensu Vertebrata) | 9.88e-27 | 23 |
neuron | 1.04e-16 | 33 |
neuronal stem cell | 1.04e-16 | 33 |
neuroblast | 1.04e-16 | 33 |
electrically signaling cell | 1.04e-16 | 33 |
electrically responsive cell | 3.35e-13 | 39 |
electrically active cell | 3.35e-13 | 39 |
neural cell | 2.02e-11 | 43 |
ectodermal cell | 4.98e-11 | 44 |
neurectodermal cell | 4.98e-11 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.