FFCP PHASE1:Mm9::chr18:67248002..67248013,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14680|HGNC=|MCL_coexpression_id=1|UniProt=Q66L47,Q8BHK8|association_with_transcript=12bp_to_ENSMUST00000025402,NM_177137,uc008flr.1,uc008fls.1_5end|description=CAGE_peak_4_at_Gnal_5end|id=chr18:67248002..67248013,+|ontology_enrichment_celltype=CL:0000117!1.11e-15!23;CL:0000337!1.11e-15!23;CL:0000540!4.88e-10!33;CL:0000047!4.88e-10!33;CL:0000031!4.88e-10!33;CL:0000404!4.88e-10!33;CL:0002319!6.60e-08!43;CL:0000221!1.55e-07!44;CL:0000133!1.55e-07!44;CL:0000393!2.87e-07!39;CL:0000211!2.87e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-29,23;CL:0000337,1.62e-29,23;CL:0000540,1.70e-19,33;CL:0000047,1.70e-19,33;CL:0000031,1.70e-19,33;CL:0000404,1.70e-19,33;CL:0000393,5.98e-16,39;CL:0000211,5.98e-16,39;CL:0002319,3.88e-14,43;CL:0000221,9.78e-14,44;CL:0000133,9.78e-14,44;CL:0002610,2.40e-10,3;CL:0002612,4.15e-10,3;CL:0002613,2.50e-09,3;CL:0002614,4.76e-09,3;CL:0002321,2.37e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.42e-24!52;UBERON:0005068!7.42e-24!52;UBERON:0006241!7.42e-24!52;UBERON:0007135!7.42e-24!52;UBERON:0000073!8.99e-22!75;UBERON:0001016!8.99e-22!75;UBERON:0002616!2.64e-21!49;UBERON:0001017!4.20e-21!73;UBERON:0005743!4.20e-21!73;UBERON:0000955!1.45e-20!50;UBERON:0006238!1.45e-20!50;UBERON:0002346!7.05e-19!71;UBERON:0003075!7.05e-19!71;UBERON:0007284!7.05e-19!71;UBERON:0000033!2.28e-18!63;UBERON:0004121!7.91e-18!102;UBERON:0000924!7.91e-18!102;UBERON:0006601!7.91e-18!102;UBERON:0002020!9.82e-16!34;UBERON:0003080!3.99e-15!40;UBERON:0003056!1.54e-14!49;UBERON:0002780!2.69e-14!39;UBERON:0001890!2.69e-14!39;UBERON:0006240!2.69e-14!39;UBERON:0002791!1.63e-11!29;UBERON:0003528!1.63e-11!29;UBERON:0001893!1.63e-11!29;UBERON:0003076!7.74e-10!12;UBERON:0003057!7.74e-10!12;UBERON:0000153!1.18e-09!94;UBERON:0007811!2.81e-09!86;UBERON:0002420!4.43e-08!8;UBERON:0007245!4.43e-08!8;UBERON:0010009!4.43e-08!8;UBERON:0010011!4.43e-08!8;UBERON:0000454!4.43e-08!8;UBERON:0002240!6.00e-07!6;UBERON:0005174!6.00e-07!6;UBERON:0001137!6.00e-07!6;UBERON:0002298!8.56e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.85e-31,54;UBERON:0001017,4.13e-28,73;UBERON:0001016,3.27e-27,75;UBERON:0001049,5.59e-27,52;UBERON:0005068,5.59e-27,52;UBERON:0006241,5.59e-27,52;UBERON:0007135,5.59e-27,52;UBERON:0003076,7.80e-23,12;UBERON:0003057,7.80e-23,12;UBERON:0002346,5.65e-21,64;UBERON:0003075,5.65e-21,64;UBERON:0007284,5.65e-21,64;UBERON:0004121,2.64e-20,95;UBERON:0000924,2.64e-20,95;UBERON:0006601,2.64e-20,95;UBERON:0002020,8.25e-18,34;UBERON:0010371,9.16e-18,73;UBERON:0002240,2.14e-17,6;UBERON:0005174,2.14e-17,6;UBERON:0001137,2.14e-17,6;UBERON:0002420,1.90e-16,8;UBERON:0007245,1.90e-16,8;UBERON:0010009,1.90e-16,8;UBERON:0010011,1.90e-16,8;UBERON:0000454,1.90e-16,8;UBERON:0002616,3.87e-16,46;UBERON:0000955,1.03e-15,47;UBERON:0006238,1.03e-15,47;UBERON:0001948,7.27e-15,5;UBERON:0002315,7.27e-15,5;UBERON:0010314,4.78e-13,92;UBERON:0002950,1.09e-11,4;UBERON:0001891,1.09e-11,4;UBERON:0009616,1.09e-11,4;UBERON:0010286,1.09e-11,4;UBERON:0003080,6.96e-11,40;UBERON:0004684,2.40e-10,3;UBERON:0002275,2.40e-10,3;UBERON:0002257,4.15e-10,3;UBERON:0000025,1.51e-09,114;UBERON:0002780,1.68e-09,39;UBERON:0001890,1.68e-09,39;UBERON:0006240,1.68e-09,39;UBERON:0003528,2.36e-09,29;UBERON:0002791,2.36e-09,29;UBERON:0001893,2.36e-09,29;UBERON:0000369,3.29e-09,5;UBERON:0002435,3.29e-09,5;UBERON:0000204,3.29e-09,5;UBERON:0010082,3.29e-09,5;UBERON:0002038,4.76e-09,3;UBERON:0009663,4.76e-09,3;UBERON:0009661,4.76e-09,3;UBERON:0000125,4.76e-09,3;UBERON:0002308,4.76e-09,3;UBERON:0004111,1.37e-08,122;UBERON:0003056,2.34e-08,49;UBERON:0004733,5.95e-08,6;UBERON:0004732,5.95e-08,6;UBERON:0002028,5.95e-08,6;UBERON:0007277,5.95e-08,6;UBERON:0011216,9.27e-08,194;UBERON:0001896,7.07e-07,2;UBERON:0002298,7.07e-07,2;UBERON:0005290,7.07e-07,2;UBERON:0010096,7.07e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,1.99955689082663,2.20868540951614,0.489963196859816,0.670918297127655,0,4.40463523997555,7.02280359468532,6.91229399653096,3.16527090552465,2.37867873366265,2.6045668527838,2.79182999001381,2.8138130501584,1.37518422999129,6.18720029494702,5.41012387036591,3.54158947068071,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,3.22058876712702,1.8850203613211,0,0,0,0,2.99581278809645,1.37250180845588,0.753926112677186,1.73824320192276,1.02286182932132,6.02585329222724,3.89379031362618,0.203678727700633,0,0,0.210441855886474,0,0,0,0.30140963567143,0.340182495756639,0.12811372028485,0.468508622798644,0,0.431135985865684,0,0.351902248327898,0.43839146485515,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=14680 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q66L47,Q8BHK8 | |||
|association_with_transcript=12bp_to_ENSMUST00000025402,NM_177137,uc008flr.1,uc008fls.1_5end | |||
|description=CAGE_peak_4_at_Gnal_5end | |||
|id=chr18:67248002..67248013,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.11e-15!23;CL:0000337!1.11e-15!23;CL:0000540!4.88e-10!33;CL:0000047!4.88e-10!33;CL:0000031!4.88e-10!33;CL:0000404!4.88e-10!33;CL:0002319!6.60e-08!43;CL:0000221!1.55e-07!44;CL:0000133!1.55e-07!44;CL:0000393!2.87e-07!39;CL:0000211!2.87e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-29,23;CL:0000337,1.62e-29,23;CL:0000540,1.70e-19,33;CL:0000047,1.70e-19,33;CL:0000031,1.70e-19,33;CL:0000404,1.70e-19,33;CL:0000393,5.98e-16,39;CL:0000211,5.98e-16,39;CL:0002319,3.88e-14,43;CL:0000221,9.78e-14,44;CL:0000133,9.78e-14,44;CL:0002610,2.40e-10,3;CL:0002612,4.15e-10,3;CL:0002613,2.50e-09,3;CL:0002614,4.76e-09,3;CL:0002321,2.37e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.42e-24!52;UBERON:0005068!7.42e-24!52;UBERON:0006241!7.42e-24!52;UBERON:0007135!7.42e-24!52;UBERON:0000073!8.99e-22!75;UBERON:0001016!8.99e-22!75;UBERON:0002616!2.64e-21!49;UBERON:0001017!4.20e-21!73;UBERON:0005743!4.20e-21!73;UBERON:0000955!1.45e-20!50;UBERON:0006238!1.45e-20!50;UBERON:0002346!7.05e-19!71;UBERON:0003075!7.05e-19!71;UBERON:0007284!7.05e-19!71;UBERON:0000033!2.28e-18!63;UBERON:0004121!7.91e-18!102;UBERON:0000924!7.91e-18!102;UBERON:0006601!7.91e-18!102;UBERON:0002020!9.82e-16!34;UBERON:0003080!3.99e-15!40;UBERON:0003056!1.54e-14!49;UBERON:0002780!2.69e-14!39;UBERON:0001890!2.69e-14!39;UBERON:0006240!2.69e-14!39;UBERON:0002791!1.63e-11!29;UBERON:0003528!1.63e-11!29;UBERON:0001893!1.63e-11!29;UBERON:0003076!7.74e-10!12;UBERON:0003057!7.74e-10!12;UBERON:0000153!1.18e-09!94;UBERON:0007811!2.81e-09!86;UBERON:0002420!4.43e-08!8;UBERON:0007245!4.43e-08!8;UBERON:0010009!4.43e-08!8;UBERON:0010011!4.43e-08!8;UBERON:0000454!4.43e-08!8;UBERON:0002240!6.00e-07!6;UBERON:0005174!6.00e-07!6;UBERON:0001137!6.00e-07!6;UBERON:0002298!8.56e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.85e-31,54;UBERON:0001017,4.13e-28,73;UBERON:0001016,3.27e-27,75;UBERON:0001049,5.59e-27,52;UBERON:0005068,5.59e-27,52;UBERON:0006241,5.59e-27,52;UBERON:0007135,5.59e-27,52;UBERON:0003076,7.80e-23,12;UBERON:0003057,7.80e-23,12;UBERON:0002346,5.65e-21,64;UBERON:0003075,5.65e-21,64;UBERON:0007284,5.65e-21,64;UBERON:0004121,2.64e-20,95;UBERON:0000924,2.64e-20,95;UBERON:0006601,2.64e-20,95;UBERON:0002020,8.25e-18,34;UBERON:0010371,9.16e-18,73;UBERON:0002240,2.14e-17,6;UBERON:0005174,2.14e-17,6;UBERON:0001137,2.14e-17,6;UBERON:0002420,1.90e-16,8;UBERON:0007245,1.90e-16,8;UBERON:0010009,1.90e-16,8;UBERON:0010011,1.90e-16,8;UBERON:0000454,1.90e-16,8;UBERON:0002616,3.87e-16,46;UBERON:0000955,1.03e-15,47;UBERON:0006238,1.03e-15,47;UBERON:0001948,7.27e-15,5;UBERON:0002315,7.27e-15,5;UBERON:0010314,4.78e-13,92;UBERON:0002950,1.09e-11,4;UBERON:0001891,1.09e-11,4;UBERON:0009616,1.09e-11,4;UBERON:0010286,1.09e-11,4;UBERON:0003080,6.96e-11,40;UBERON:0004684,2.40e-10,3;UBERON:0002275,2.40e-10,3;UBERON:0002257,4.15e-10,3;UBERON:0000025,1.51e-09,114;UBERON:0002780,1.68e-09,39;UBERON:0001890,1.68e-09,39;UBERON:0006240,1.68e-09,39;UBERON:0003528,2.36e-09,29;UBERON:0002791,2.36e-09,29;UBERON:0001893,2.36e-09,29;UBERON:0000369,3.29e-09,5;UBERON:0002435,3.29e-09,5;UBERON:0000204,3.29e-09,5;UBERON:0010082,3.29e-09,5;UBERON:0002038,4.76e-09,3;UBERON:0009663,4.76e-09,3;UBERON:0009661,4.76e-09,3;UBERON:0000125,4.76e-09,3;UBERON:0002308,4.76e-09,3;UBERON:0004111,1.37e-08,122;UBERON:0003056,2.34e-08,49;UBERON:0004733,5.95e-08,6;UBERON:0004732,5.95e-08,6;UBERON:0002028,5.95e-08,6;UBERON:0007277,5.95e-08,6;UBERON:0011216,9.27e-08,194;UBERON:0001896,7.07e-07,2;UBERON:0002298,7.07e-07,2;UBERON:0005290,7.07e-07,2;UBERON:0010096,7.07e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,1.99955689082663,2.20868540951614,0.489963196859816,0.670918297127655,0,4.40463523997555,7.02280359468532,6.91229399653096,3.16527090552465,2.37867873366265,2.6045668527838,2.79182999001381,2.8138130501584,1.37518422999129,6.18720029494702,5.41012387036591,3.54158947068071,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,3.22058876712702,1.8850203613211,0,0,0,0,2.99581278809645,1.37250180845588,0.753926112677186,1.73824320192276,1.02286182932132,6.02585329222724,3.89379031362618,0.203678727700633,0,0,0.210441855886474,0,0,0,0.30140963567143,0.340182495756639,0.12811372028485,0.468508622798644,0,0.431135985865684,0,0.351902248327898,0.43839146485515,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.841159794256509,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0,3.85321415970701,2.57865710502847,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,1.16653475962614,0,0.56369293868419,0,0,0,0,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,1.14579102687879,1.3748254587495,2.05524755931193,0.755393897389701,0.675022500231806,0,0.906284817968409,0.51776031175182,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.919217542250071,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.561849044819294,0.128050304809739,0.516919220600519,0.952587382566147,0.579421629724277,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0,0,0.145346416632329,0.564656282491984,0.423073039458382,0.182927972872773,0,0.271608227691724,1.68342681497322,0.593175090620871,0.689531376628944,0,0.77468420592983,0.192906610981141,0.499621155875892,0.701794825336225,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p4@Gnal | |||
}} |
Revision as of 16:37, 13 September 2013
Short description: | p4@Gnal |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gnal_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 12bp_to_ENSMUST00000025402, NM_177137, uc008flr.1, uc008fls.1_5end |
EntrezGene: | Gnal |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.62e-29 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-29 | 23 |
neuron | 1.70e-19 | 33 |
neuronal stem cell | 1.70e-19 | 33 |
neuroblast | 1.70e-19 | 33 |
electrically signaling cell | 1.70e-19 | 33 |
electrically responsive cell | 5.98e-16 | 39 |
electrically active cell | 5.98e-16 | 39 |
neural cell | 3.88e-14 | 43 |
ectodermal cell | 9.78e-14 | 44 |
neurectodermal cell | 9.78e-14 | 44 |
raphe nuclei neuron | 2.40e-10 | 3 |
neuron of the ventral spinal cord | 4.15e-10 | 3 |
striatum neuron | 2.50e-09 | 3 |
neuron of the substantia nigra | 4.76e-09 | 3 |
embryonic cell | 2.37e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.