FFCP PHASE1:Hg19::chr2:45169024..45169033,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6496 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10889 | |||
|TSSclassifier=strong | |||
|UniProt=O95343 | |||
|association_with_transcript=-3bp_to_NM_005413,uc002run.1_5end | |||
|coexpression_cluster_id=C1905 | |||
|description=CAGE_peak_12_at_SIX3_5end | |||
|id=chr2:45169024..45169033,+ | |||
|ontology_enrichment_celltype=CL:0002586!2.08e-09!3;CL:0000064!2.40e-09!3;CL:0005012!2.40e-09!3;CL:0000067!2.40e-09!3;CL:0002304!2.40e-09!3;CL:0000306!2.21e-07!4;CL:0002222!2.21e-07!4;CL:0002224!2.21e-07!4;CL:0000149!3.83e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.81e-09;4!CL:0002222;1.81e-09;4!CL:0002224;1.81e-09;4!CL:0000333;9.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.15e-09,4;CL:0002222,2.15e-09,4;CL:0002224,2.15e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.36e-19;2!UBERON:0003056;1.45e-12;3 | |||
|ontology_enrichment_disease=DOID:171!9.86e-10!10;DOID:169!5.02e-08!6;DOID:5409!9.92e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.34e-27,3;UBERON:0005382,1.34e-27,3;UBERON:0000369,7.24e-21,4;UBERON:0002435,7.24e-21,4;UBERON:0000204,7.24e-21,4;UBERON:0010082,7.24e-21,4;UBERON:0009663,1.20e-20,7;UBERON:0001873,4.91e-19,2;UBERON:0010122,4.91e-19,2;UBERON:0000007,6.43e-19,2;UBERON:0003056,2.95e-18,61;UBERON:0002420,4.09e-16,9;UBERON:0000125,4.09e-16,9;UBERON:0007245,4.09e-16,9;UBERON:0002308,4.09e-16,9;UBERON:0010009,4.09e-16,9;UBERON:0010011,4.09e-16,9;UBERON:0000454,4.09e-16,9;UBERON:0000970,2.40e-14,21;UBERON:0002104,2.40e-14,21;UBERON:0000966,1.18e-13,6;UBERON:0005388,1.18e-13,6;UBERON:0001802,1.18e-13,6;UBERON:0003075,3.89e-13,82;UBERON:0007284,3.89e-13,82;UBERON:0000020,1.68e-12,24;UBERON:0001032,1.68e-12,24;UBERON:0004456,1.68e-12,24;UBERON:0002346,1.93e-12,86;UBERON:0000019,1.23e-10,20;UBERON:0000047,1.23e-10,20;UBERON:0010312,1.23e-10,20;UBERON:0004088,1.23e-10,20;UBERON:0010230,1.23e-10,20;UBERON:0003072,1.23e-10,20;UBERON:0004128,1.23e-10,20;UBERON:0003071,1.23e-10,20;UBERON:0001874,2.37e-10,1;UBERON:0010371,5.76e-10,104;UBERON:0003296,6.34e-10,4;UBERON:0010133,6.34e-10,4;UBERON:0001456,1.18e-09,22;UBERON:0002780,1.41e-09,41;UBERON:0001890,1.41e-09,41;UBERON:0003080,1.41e-09,41;UBERON:0006240,1.41e-09,41;UBERON:0010077,2.15e-09,4;UBERON:0005389,2.15e-09,4;UBERON:0000484,2.15e-09,4;UBERON:0002546,2.15e-09,4;UBERON:0000965,2.15e-09,4;UBERON:0001803,2.15e-09,4;UBERON:0003073,2.15e-09,4;UBERON:0005426,2.15e-09,4;UBERON:0010314,6.89e-09,132;UBERON:0001264,1.60e-08,10;UBERON:0002075,5.49e-08,18;UBERON:0001016,5.61e-08,89;UBERON:0000013,9.88e-08,5;UBERON:0002410,9.88e-08,5;UBERON:0007625,1.57e-07,11;UBERON:0004121,2.19e-07,171;UBERON:0000924,2.19e-07,171;UBERON:0006601,2.19e-07,171;UBERON:0000073,2.82e-07,53;UBERON:0002616,2.82e-07,53;UBERON:0000955,4.80e-07,68;UBERON:0006238,4.80e-07,68;UBERON:0001049,7.49e-07,56;UBERON:0005068,7.49e-07,56;UBERON:0006241,7.49e-07,56;UBERON:0007135,7.49e-07,56;UBERON:0005085,8.40e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,0.443458794925128,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,1.04337364477569,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,1.64007322849853,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0,0,0,0,0,0,0,0,0,2.30584991324076,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,5.31444831488303,2.65312164975897,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.741383633679017,1.14864144456001,0,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0.379119477770928,0,0,3.32326936353593,0.330991955875499,2.82539626566503,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,2.03382666702479,0,0,0,1.17330829640882,0,0,0,0,1.14536596165916,0.514784993585894,0,0,0,0,0,0,0,1.80126086612937,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,1.40683808434017,0,0,0.982886743728125,0.33946505990805,0,0.247871528518004,1.11728983594649,0,0,0,0,0,0.642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.795664888465099,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0.336283722218824,3.64179362541979,2.27662191351298,0,0,0,0,0,0.236387681767936,0.222462803784138,0,2.82808061848803,0,0,0,0,1.42953088353313,2.05417695252545,0,3.12944890144643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83244063544298,0,0.329821550236287,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p12@SIX3 | |||
}} |
Revision as of 02:54, 21 January 2014
Short description: | p12@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SIX3_5end |
Coexpression cluster: | C1905_caudate_putamen_embryonic_pituitary_globus_cord_rhabdomyosarcoma |
Association with transcript: | -3bp_to_NM_005413, uc002run.1_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | O95343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.15e-09 | 4 |
vertebrate lens cell | 2.15e-09 | 4 |
lens epithelial cell | 2.15e-09 | 4 |