FFCP PHASE1:Mm9::chr2:124962334..124962359,+: Difference between revisions
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{{FFCP|EntrezGene=381418|HGNC=|MCL_coexpression_id=287|UniProt=Q3URE8|association_with_transcript=-68bp_to_ENSMUST00000099452,NM_001162934,uc008mce.2_5end|description=CAGE_peak_1_at_Ctxn2_5end|id=chr2:124962334..124962359,+|ontology_enrichment_celltype=CL:0000117!2.89e-18!23;CL:0000337!2.89e-18!23;CL:0000540!5.06e-11!33;CL:0000047!5.06e-11!33;CL:0000031!5.06e-11!33;CL:0000404!5.06e-11!33;CL:0000393!1.63e-08!39;CL:0000211!1.63e-08!39;CL:0002319!2.96e-07!43;CL:0000221!5.60e-07!44;CL:0000133!5.60e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-23,23;CL:0000337,1.82e-23,23;CL:0000540,1.96e-15,33;CL:0000047,1.96e-15,33;CL:0000031,1.96e-15,33;CL:0000404,1.96e-15,33;CL:0000393,1.35e-12,39;CL:0000211,1.35e-12,39;CL:0002319,3.82e-11,43;CL:0000221,8.01e-11,44;CL:0000133,8.01e-11,44;CL:0002610,2.04e-10,3;CL:0002614,2.04e-10,3;CL:0002612,9.94e-10,3;CL:0002611,2.48e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.44e-34!52;UBERON:0005068!2.44e-34!52;UBERON:0006241!2.44e-34!52;UBERON:0007135!2.44e-34!52;UBERON:0001017!4.26e-31!73;UBERON:0005743!4.26e-31!73;UBERON:0002616!1.84e-30!49;UBERON:0000073!6.60e-30!75;UBERON:0001016!6.60e-30!75;UBERON:0000955!1.26e-29!50;UBERON:0006238!1.26e-29!50;UBERON:0002020!9.62e-26!34;UBERON:0003080!2.87e-23!40;UBERON:0002346!3.39e-23!71;UBERON:0003075!3.39e-23!71;UBERON:0007284!3.39e-23!71;UBERON:0002780!5.28e-22!39;UBERON:0001890!5.28e-22!39;UBERON:0006240!5.28e-22!39;UBERON:0000033!3.24e-21!63;UBERON:0004121!1.83e-19!102;UBERON:0000924!1.83e-19!102;UBERON:0006601!1.83e-19!102;UBERON:0002791!4.58e-19!29;UBERON:0003528!4.58e-19!29;UBERON:0001893!4.58e-19!29;UBERON:0003056!2.35e-17!49;UBERON:0002021!3.09e-13!10;UBERON:0000411!3.09e-13!10;UBERON:0001950!3.09e-13!10;UBERON:0007811!1.08e-12!86;UBERON:0002619!9.91e-12!17;UBERON:0003076!2.02e-11!12;UBERON:0003057!2.02e-11!12;UBERON:0002420!5.97e-11!8;UBERON:0007245!5.97e-11!8;UBERON:0010009!5.97e-11!8;UBERON:0010011!5.97e-11!8;UBERON:0000454!5.97e-11!8;UBERON:0000153!9.59e-11!94;UBERON:0000956!2.27e-10!21;UBERON:0001869!2.27e-10!21;UBERON:0000203!2.27e-10!21;UBERON:0002298!6.28e-10!6;UBERON:0002240!1.15e-09!6;UBERON:0005174!1.15e-09!6;UBERON:0001137!1.15e-09!6;UBERON:0000025!2.01e-09!114;UBERON:0004111!9.40e-09!122;UBERON:0001948!1.81e-08!5;UBERON:0002315!1.81e-08!5;UBERON:0002950!2.64e-07!4;UBERON:0001891!2.64e-07!4;UBERON:0009616!2.64e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-35,54;UBERON:0001017,2.10e-31,73;UBERON:0001049,1.57e-30,52;UBERON:0005068,1.57e-30,52;UBERON:0006241,1.57e-30,52;UBERON:0007135,1.57e-30,52;UBERON:0001016,2.01e-30,75;UBERON:0002020,2.10e-24,34;UBERON:0002346,7.24e-24,64;UBERON:0003075,7.24e-24,64;UBERON:0007284,7.24e-24,64;UBERON:0004121,6.97e-23,95;UBERON:0000924,6.97e-23,95;UBERON:0006601,6.97e-23,95;UBERON:0010371,2.66e-20,73;UBERON:0002616,7.66e-19,46;UBERON:0000955,2.35e-18,47;UBERON:0006238,2.35e-18,47;UBERON:0002240,7.94e-18,6;UBERON:0005174,7.94e-18,6;UBERON:0001137,7.94e-18,6;UBERON:0003080,2.23e-17,40;UBERON:0002780,1.26e-15,39;UBERON:0001890,1.26e-15,39;UBERON:0006240,1.26e-15,39;UBERON:0001948,1.99e-15,5;UBERON:0002315,1.99e-15,5;UBERON:0010314,4.65e-15,92;UBERON:0003076,5.48e-15,12;UBERON:0003057,5.48e-15,12;UBERON:0003528,2.78e-14,29;UBERON:0002791,2.78e-14,29;UBERON:0001893,2.78e-14,29;UBERON:0003056,1.60e-13,49;UBERON:0002950,4.24e-13,4;UBERON:0001891,4.24e-13,4;UBERON:0009616,4.24e-13,4;UBERON:0010286,4.24e-13,4;UBERON:0002021,7.83e-13,10;UBERON:0000411,7.83e-13,10;UBERON:0001950,7.83e-13,10;UBERON:0000025,3.65e-11,114;UBERON:0002038,2.04e-10,3;UBERON:0009663,2.04e-10,3;UBERON:0009661,2.04e-10,3;UBERON:0000125,2.04e-10,3;UBERON:0002308,2.04e-10,3;UBERON:0004684,2.04e-10,3;UBERON:0002275,2.04e-10,3;UBERON:0004111,4.28e-10,122;UBERON:0002257,9.94e-10,3;UBERON:0002420,1.90e-09,8;UBERON:0007245,1.90e-09,8;UBERON:0010009,1.90e-09,8;UBERON:0010011,1.90e-09,8;UBERON:0000454,1.90e-09,8;UBERON:0002619,2.35e-09,17;UBERON:0011216,2.45e-08,194;UBERON:0000956,2.39e-07,21;UBERON:0001869,2.39e-07,21;UBERON:0000203,2.39e-07,21;UBERON:0002256,2.48e-07,2;UBERON:0001896,6.94e-07,2;UBERON:0002298,6.94e-07,2;UBERON:0005290,6.94e-07,2;UBERON:0010096,6.94e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0,0,0,7.7125765789027,5.30084498283872,0,0,0.919218786610021,9.91042928994498,6.89511625660014,8.44835932909339,0.527545150920775,1.64677758484337,0.52091337055676,10.8881369610539,14.069065250792,4.43114918552749,7.07108605136802,7.26095572075425,1.86399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,4.34392854273986,3.20250421973039,0.125654352112864,0.869121600961382,1.53429274398198,5.40248915854856,2.59586020908412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.54667864109319,2.05524755931193,3.0215755895588,0.675022500231806,2.70192721934532,1.81256963593682,3.62432218226274,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.37456602987953,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p1@Ctxn2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:381418 | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3URE8 | |||
|association_with_transcript=-68bp_to_ENSMUST00000099452,NM_001162934,uc008mce.2_5end | |||
|cluster_id=chr2:124962334..124962359,+ | |||
|description=CAGE_peak_1_at_Ctxn2_5end | |||
|id=chr2:124962334..124962359,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.89e-18!23;CL:0000337!2.89e-18!23;CL:0000540!5.06e-11!33;CL:0000047!5.06e-11!33;CL:0000031!5.06e-11!33;CL:0000404!5.06e-11!33;CL:0000393!1.63e-08!39;CL:0000211!1.63e-08!39;CL:0002319!2.96e-07!43;CL:0000221!5.60e-07!44;CL:0000133!5.60e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-23,23;CL:0000337,1.82e-23,23;CL:0000540,1.96e-15,33;CL:0000047,1.96e-15,33;CL:0000031,1.96e-15,33;CL:0000404,1.96e-15,33;CL:0000393,1.35e-12,39;CL:0000211,1.35e-12,39;CL:0002319,3.82e-11,43;CL:0000221,8.01e-11,44;CL:0000133,8.01e-11,44;CL:0002610,2.04e-10,3;CL:0002614,2.04e-10,3;CL:0002612,9.94e-10,3;CL:0002611,2.48e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.44e-34!52;UBERON:0005068!2.44e-34!52;UBERON:0006241!2.44e-34!52;UBERON:0007135!2.44e-34!52;UBERON:0001017!4.26e-31!73;UBERON:0005743!4.26e-31!73;UBERON:0002616!1.84e-30!49;UBERON:0000073!6.60e-30!75;UBERON:0001016!6.60e-30!75;UBERON:0000955!1.26e-29!50;UBERON:0006238!1.26e-29!50;UBERON:0002020!9.62e-26!34;UBERON:0003080!2.87e-23!40;UBERON:0002346!3.39e-23!71;UBERON:0003075!3.39e-23!71;UBERON:0007284!3.39e-23!71;UBERON:0002780!5.28e-22!39;UBERON:0001890!5.28e-22!39;UBERON:0006240!5.28e-22!39;UBERON:0000033!3.24e-21!63;UBERON:0004121!1.83e-19!102;UBERON:0000924!1.83e-19!102;UBERON:0006601!1.83e-19!102;UBERON:0002791!4.58e-19!29;UBERON:0003528!4.58e-19!29;UBERON:0001893!4.58e-19!29;UBERON:0003056!2.35e-17!49;UBERON:0002021!3.09e-13!10;UBERON:0000411!3.09e-13!10;UBERON:0001950!3.09e-13!10;UBERON:0007811!1.08e-12!86;UBERON:0002619!9.91e-12!17;UBERON:0003076!2.02e-11!12;UBERON:0003057!2.02e-11!12;UBERON:0002420!5.97e-11!8;UBERON:0007245!5.97e-11!8;UBERON:0010009!5.97e-11!8;UBERON:0010011!5.97e-11!8;UBERON:0000454!5.97e-11!8;UBERON:0000153!9.59e-11!94;UBERON:0000956!2.27e-10!21;UBERON:0001869!2.27e-10!21;UBERON:0000203!2.27e-10!21;UBERON:0002298!6.28e-10!6;UBERON:0002240!1.15e-09!6;UBERON:0005174!1.15e-09!6;UBERON:0001137!1.15e-09!6;UBERON:0000025!2.01e-09!114;UBERON:0004111!9.40e-09!122;UBERON:0001948!1.81e-08!5;UBERON:0002315!1.81e-08!5;UBERON:0002950!2.64e-07!4;UBERON:0001891!2.64e-07!4;UBERON:0009616!2.64e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-35,54;UBERON:0001017,2.10e-31,73;UBERON:0001049,1.57e-30,52;UBERON:0005068,1.57e-30,52;UBERON:0006241,1.57e-30,52;UBERON:0007135,1.57e-30,52;UBERON:0001016,2.01e-30,75;UBERON:0002020,2.10e-24,34;UBERON:0002346,7.24e-24,64;UBERON:0003075,7.24e-24,64;UBERON:0007284,7.24e-24,64;UBERON:0004121,6.97e-23,95;UBERON:0000924,6.97e-23,95;UBERON:0006601,6.97e-23,95;UBERON:0010371,2.66e-20,73;UBERON:0002616,7.66e-19,46;UBERON:0000955,2.35e-18,47;UBERON:0006238,2.35e-18,47;UBERON:0002240,7.94e-18,6;UBERON:0005174,7.94e-18,6;UBERON:0001137,7.94e-18,6;UBERON:0003080,2.23e-17,40;UBERON:0002780,1.26e-15,39;UBERON:0001890,1.26e-15,39;UBERON:0006240,1.26e-15,39;UBERON:0001948,1.99e-15,5;UBERON:0002315,1.99e-15,5;UBERON:0010314,4.65e-15,92;UBERON:0003076,5.48e-15,12;UBERON:0003057,5.48e-15,12;UBERON:0003528,2.78e-14,29;UBERON:0002791,2.78e-14,29;UBERON:0001893,2.78e-14,29;UBERON:0003056,1.60e-13,49;UBERON:0002950,4.24e-13,4;UBERON:0001891,4.24e-13,4;UBERON:0009616,4.24e-13,4;UBERON:0010286,4.24e-13,4;UBERON:0002021,7.83e-13,10;UBERON:0000411,7.83e-13,10;UBERON:0001950,7.83e-13,10;UBERON:0000025,3.65e-11,114;UBERON:0002038,2.04e-10,3;UBERON:0009663,2.04e-10,3;UBERON:0009661,2.04e-10,3;UBERON:0000125,2.04e-10,3;UBERON:0002308,2.04e-10,3;UBERON:0004684,2.04e-10,3;UBERON:0002275,2.04e-10,3;UBERON:0004111,4.28e-10,122;UBERON:0002257,9.94e-10,3;UBERON:0002420,1.90e-09,8;UBERON:0007245,1.90e-09,8;UBERON:0010009,1.90e-09,8;UBERON:0010011,1.90e-09,8;UBERON:0000454,1.90e-09,8;UBERON:0002619,2.35e-09,17;UBERON:0011216,2.45e-08,194;UBERON:0000956,2.39e-07,21;UBERON:0001869,2.39e-07,21;UBERON:0000203,2.39e-07,21;UBERON:0002256,2.48e-07,2;UBERON:0001896,6.94e-07,2;UBERON:0002298,6.94e-07,2;UBERON:0005290,6.94e-07,2;UBERON:0010096,6.94e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0,0,0,7.7125765789027,5.30084498283872,0,0,0.919218786610021,9.91042928994498,6.89511625660014,8.44835932909339,0.527545150920775,1.64677758484337,0.52091337055676,10.8881369610539,14.069065250792,4.43114918552749,7.07108605136802,7.26095572075425,1.86399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,4.34392854273986,3.20250421973039,0.125654352112864,0.869121600961382,1.53429274398198,5.40248915854856,2.59586020908412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.54667864109319,2.05524755931193,3.0215755895588,0.675022500231806,2.70192721934532,1.81256963593682,3.62432218226274,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.37456602987953,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p1@Ctxn2 | |||
}} |
Revision as of 22:39, 3 August 2015
Short description: | p1@Ctxn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ctxn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | -68bp_to_ENSMUST00000099452, NM_001162934, uc008mce.2_5end |
EntrezGene: | 381418 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.82e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.82e-23 | 23 |
neuron | 1.96e-15 | 33 |
neuronal stem cell | 1.96e-15 | 33 |
neuroblast | 1.96e-15 | 33 |
electrically signaling cell | 1.96e-15 | 33 |
electrically responsive cell | 1.35e-12 | 39 |
electrically active cell | 1.35e-12 | 39 |
neural cell | 3.82e-11 | 43 |
ectodermal cell | 8.01e-11 | 44 |
neurectodermal cell | 8.01e-11 | 44 |
raphe nuclei neuron | 2.04e-10 | 3 |
neuron of the substantia nigra | 2.04e-10 | 3 |
neuron of the ventral spinal cord | 9.94e-10 | 3 |
neuron of the dorsal spinal cord | 2.48e-07 | 2 |