FFCP PHASE1:Mm9::chr14:70930803..70930810,+: Difference between revisions
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{{FFCP|EntrezGene=213469|HGNC=|MCL_coexpression_id=1589|UniProt=Q8K406,Q3V1R3|association_with_transcript=175bp_to_ENSMUST00000047331,NM_145219,uc007uog.2,uc007uoh.2_5end|description=CAGE_peak_4_at_Lgi3_5end|id=chr14:70930803..70930810,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,1.28e-08,3;CL:0002610,4.95e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!3.73e-15!14;UBERON:0000117!3.73e-15!14;UBERON:0000171!3.73e-15!14;UBERON:0000170!3.73e-15!14;UBERON:0005597!3.73e-15!14;UBERON:0000118!3.73e-15!14;UBERON:0001049!7.16e-15!52;UBERON:0005068!7.16e-15!52;UBERON:0006241!7.16e-15!52;UBERON:0007135!7.16e-15!52;UBERON:0000955!1.02e-14!50;UBERON:0006238!1.02e-14!50;UBERON:0002616!3.39e-14!49;UBERON:0001017!4.66e-14!73;UBERON:0005743!4.66e-14!73;UBERON:0000073!2.56e-13!75;UBERON:0001016!2.56e-13!75;UBERON:0005153!5.42e-13!17;UBERON:0005178!1.50e-11!17;UBERON:0005181!1.50e-11!17;UBERON:0002224!1.50e-11!17;UBERON:0000915!1.50e-11!17;UBERON:0008947!1.50e-11!17;UBERON:0003258!1.50e-11!17;UBERON:0000025!6.70e-11!114;UBERON:0002346!1.50e-10!71;UBERON:0003075!1.50e-10!71;UBERON:0007284!1.50e-10!71;UBERON:0005157!6.88e-10!27;UBERON:0004111!1.03e-09!122;UBERON:0000033!1.90e-09!63;UBERON:0003080!3.58e-09!40;UBERON:0002020!3.63e-09!34;UBERON:0002780!1.66e-08!39;UBERON:0001890!1.66e-08!39;UBERON:0006240!1.66e-08!39;UBERON:0004121!1.77e-08!102;UBERON:0000924!1.77e-08!102;UBERON:0006601!1.77e-08!102;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10;UBERON:0002298!1.27e-07!6;UBERON:0003076!3.28e-07!12;UBERON:0003057!3.28e-07!12;UBERON:0002791!3.64e-07!29;UBERON:0003528!3.64e-07!29;UBERON:0001893!3.64e-07!29;UBERON:0000310!8.88e-07!6;UBERON:0001443!8.88e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.93e-28,14;UBERON:0000117,1.93e-28,14;UBERON:0000171,1.93e-28,14;UBERON:0000170,1.93e-28,14;UBERON:0005597,1.93e-28,14;UBERON:0000118,1.93e-28,14;UBERON:0005153,7.01e-23,17;UBERON:0005178,7.01e-23,17;UBERON:0005181,7.01e-23,17;UBERON:0002224,7.01e-23,17;UBERON:0000915,7.01e-23,17;UBERON:0008947,7.01e-23,17;UBERON:0003258,7.01e-23,17;UBERON:0005157,5.46e-19,20;UBERON:0000025,1.74e-15,114;UBERON:0000073,1.28e-14,54;UBERON:0004111,5.17e-14,122;UBERON:0001049,3.59e-12,52;UBERON:0005068,3.59e-12,52;UBERON:0006241,3.59e-12,52;UBERON:0007135,3.59e-12,52;UBERON:0001017,4.96e-12,73;UBERON:0001016,1.43e-11,75;UBERON:0002950,1.45e-10,4;UBERON:0001891,1.45e-10,4;UBERON:0009616,1.45e-10,4;UBERON:0010286,1.45e-10,4;UBERON:0000310,4.91e-10,6;UBERON:0001443,4.91e-10,6;UBERON:0002616,1.37e-09,46;UBERON:0011216,2.38e-09,194;UBERON:0000955,2.61e-09,47;UBERON:0006238,2.61e-09,47;UBERON:0002346,4.39e-09,64;UBERON:0003075,4.39e-09,64;UBERON:0007284,4.39e-09,64;UBERON:0002020,6.51e-09,34;UBERON:0002038,1.28e-08,3;UBERON:0009663,1.28e-08,3;UBERON:0009661,1.28e-08,3;UBERON:0000125,1.28e-08,3;UBERON:0002308,1.28e-08,3;UBERON:0003080,2.09e-08,40;UBERON:0004121,4.77e-08,95;UBERON:0000924,4.77e-08,95;UBERON:0006601,4.77e-08,95;UBERON:0004684,4.95e-08,3;UBERON:0002275,4.95e-08,3;UBERON:0000065,9.46e-08,41;UBERON:0000483,9.98e-08,174;UBERON:0003528,1.17e-07,29;UBERON:0002791,1.17e-07,29;UBERON:0001893,1.17e-07,29;UBERON:0000119,1.47e-07,176;UBERON:0002021,1.49e-07,10;UBERON:0000411,1.49e-07,10;UBERON:0001950,1.49e-07,10;UBERON:0001004,1.69e-07,42;UBERON:0010371,1.90e-07,73;UBERON:0002780,2.22e-07,39;UBERON:0001890,2.22e-07,39;UBERON:0006240,2.22e-07,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,1.15265491596466,0,0,0,2.85650984403804,1.54607978666129,0,0,0,3.30347642998166,3.06449611404451,2.91852413186863,0,0,0,3.62937898701795,4.50210088025344,3.81995619442025,0,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,2.09706895166752,0.457500602818626,0.125654352112864,1.73824320192276,1.27857728665165,2.70124457927428,1.1356888414743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,4.24932337383191,0.37898282354097,1.14075483509418,1.01847051465113,3.52035372432753,7.37027532743989,8.56957107189649,3.51240566144038,2.99506773801763,6.64394068946325,4.46473352240964,2.62181303545181,5.87128938344045,4.05017364028232,0,0,0,0,4.17431533968259,3.5163505977661,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.71868654031819,1.03111909406213,2.74033007908257,2.2661816921691,0.675022500231806,1.80128481289688,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0,0.37456602987953,0.512201219238954,0.459483751644906,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.376437521661322,0.507687647350059,0.182927972872773,1.05227884575137,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0.429742108096597,0,0,0|short_description=p4@Lgi3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:213469 | |||
|HGNC= | |||
|MCL_coexpression_id=1589 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K406,uniprot:Q3V1R3 | |||
|association_with_transcript=175bp_to_ENSMUST00000047331,NM_145219,uc007uog.2,uc007uoh.2_5end | |||
|cluster_id=chr14:70930803..70930810,+ | |||
|description=CAGE_peak_4_at_Lgi3_5end | |||
|id=chr14:70930803..70930810,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.28e-08,3;CL:0002610,4.95e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.73e-15!14;UBERON:0000117!3.73e-15!14;UBERON:0000171!3.73e-15!14;UBERON:0000170!3.73e-15!14;UBERON:0005597!3.73e-15!14;UBERON:0000118!3.73e-15!14;UBERON:0001049!7.16e-15!52;UBERON:0005068!7.16e-15!52;UBERON:0006241!7.16e-15!52;UBERON:0007135!7.16e-15!52;UBERON:0000955!1.02e-14!50;UBERON:0006238!1.02e-14!50;UBERON:0002616!3.39e-14!49;UBERON:0001017!4.66e-14!73;UBERON:0005743!4.66e-14!73;UBERON:0000073!2.56e-13!75;UBERON:0001016!2.56e-13!75;UBERON:0005153!5.42e-13!17;UBERON:0005178!1.50e-11!17;UBERON:0005181!1.50e-11!17;UBERON:0002224!1.50e-11!17;UBERON:0000915!1.50e-11!17;UBERON:0008947!1.50e-11!17;UBERON:0003258!1.50e-11!17;UBERON:0000025!6.70e-11!114;UBERON:0002346!1.50e-10!71;UBERON:0003075!1.50e-10!71;UBERON:0007284!1.50e-10!71;UBERON:0005157!6.88e-10!27;UBERON:0004111!1.03e-09!122;UBERON:0000033!1.90e-09!63;UBERON:0003080!3.58e-09!40;UBERON:0002020!3.63e-09!34;UBERON:0002780!1.66e-08!39;UBERON:0001890!1.66e-08!39;UBERON:0006240!1.66e-08!39;UBERON:0004121!1.77e-08!102;UBERON:0000924!1.77e-08!102;UBERON:0006601!1.77e-08!102;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10;UBERON:0002298!1.27e-07!6;UBERON:0003076!3.28e-07!12;UBERON:0003057!3.28e-07!12;UBERON:0002791!3.64e-07!29;UBERON:0003528!3.64e-07!29;UBERON:0001893!3.64e-07!29;UBERON:0000310!8.88e-07!6;UBERON:0001443!8.88e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.93e-28,14;UBERON:0000117,1.93e-28,14;UBERON:0000171,1.93e-28,14;UBERON:0000170,1.93e-28,14;UBERON:0005597,1.93e-28,14;UBERON:0000118,1.93e-28,14;UBERON:0005153,7.01e-23,17;UBERON:0005178,7.01e-23,17;UBERON:0005181,7.01e-23,17;UBERON:0002224,7.01e-23,17;UBERON:0000915,7.01e-23,17;UBERON:0008947,7.01e-23,17;UBERON:0003258,7.01e-23,17;UBERON:0005157,5.46e-19,20;UBERON:0000025,1.74e-15,114;UBERON:0000073,1.28e-14,54;UBERON:0004111,5.17e-14,122;UBERON:0001049,3.59e-12,52;UBERON:0005068,3.59e-12,52;UBERON:0006241,3.59e-12,52;UBERON:0007135,3.59e-12,52;UBERON:0001017,4.96e-12,73;UBERON:0001016,1.43e-11,75;UBERON:0002950,1.45e-10,4;UBERON:0001891,1.45e-10,4;UBERON:0009616,1.45e-10,4;UBERON:0010286,1.45e-10,4;UBERON:0000310,4.91e-10,6;UBERON:0001443,4.91e-10,6;UBERON:0002616,1.37e-09,46;UBERON:0011216,2.38e-09,194;UBERON:0000955,2.61e-09,47;UBERON:0006238,2.61e-09,47;UBERON:0002346,4.39e-09,64;UBERON:0003075,4.39e-09,64;UBERON:0007284,4.39e-09,64;UBERON:0002020,6.51e-09,34;UBERON:0002038,1.28e-08,3;UBERON:0009663,1.28e-08,3;UBERON:0009661,1.28e-08,3;UBERON:0000125,1.28e-08,3;UBERON:0002308,1.28e-08,3;UBERON:0003080,2.09e-08,40;UBERON:0004121,4.77e-08,95;UBERON:0000924,4.77e-08,95;UBERON:0006601,4.77e-08,95;UBERON:0004684,4.95e-08,3;UBERON:0002275,4.95e-08,3;UBERON:0000065,9.46e-08,41;UBERON:0000483,9.98e-08,174;UBERON:0003528,1.17e-07,29;UBERON:0002791,1.17e-07,29;UBERON:0001893,1.17e-07,29;UBERON:0000119,1.47e-07,176;UBERON:0002021,1.49e-07,10;UBERON:0000411,1.49e-07,10;UBERON:0001950,1.49e-07,10;UBERON:0001004,1.69e-07,42;UBERON:0010371,1.90e-07,73;UBERON:0002780,2.22e-07,39;UBERON:0001890,2.22e-07,39;UBERON:0006240,2.22e-07,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,1.15265491596466,0,0,0,2.85650984403804,1.54607978666129,0,0,0,3.30347642998166,3.06449611404451,2.91852413186863,0,0,0,3.62937898701795,4.50210088025344,3.81995619442025,0,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,2.09706895166752,0.457500602818626,0.125654352112864,1.73824320192276,1.27857728665165,2.70124457927428,1.1356888414743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,4.24932337383191,0.37898282354097,1.14075483509418,1.01847051465113,3.52035372432753,7.37027532743989,8.56957107189649,3.51240566144038,2.99506773801763,6.64394068946325,4.46473352240964,2.62181303545181,5.87128938344045,4.05017364028232,0,0,0,0,4.17431533968259,3.5163505977661,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.71868654031819,1.03111909406213,2.74033007908257,2.2661816921691,0.675022500231806,1.80128481289688,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0,0.37456602987953,0.512201219238954,0.459483751644906,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.376437521661322,0.507687647350059,0.182927972872773,1.05227884575137,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0.429742108096597,0,0,0 | |||
|short_description=p4@Lgi3 | |||
}} |
Revision as of 18:25, 4 August 2015
Short description: | p4@Lgi3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lgi3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1589 |
Association with transcript: | 175bp_to_ENSMUST00000047331, NM_145219, uc007uog.2, uc007uoh.2_5end |
EntrezGene: | 213469 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.28e-08 | 3 |
raphe nuclei neuron | 4.95e-08 | 3 |