FFCP PHASE1:Mm9::chr18:31599337..31599343,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:31599337..31599343,-|id=chr18:31599337..31599343,-|ontology_enrichment_celltype=CL:0000540!4.45e-27!33;CL:0000047!4.45e-27!33;CL:0000031!4.45e-27!33;CL:0000404!4.45e-27!33;CL:0000221!1.70e-21!44;CL:0000133!1.70e-21!44;CL:0002319!6.19e-21!43;CL:0000393!9.62e-21!39;CL:0000211!9.62e-21!39;CL:0000117!3.83e-20!23;CL:0000337!3.83e-20!23;CL:0000055!5.18e-16!50;CL:0002321!1.74e-08!70;CL:0000220!1.74e-08!70;CL:0000107!1.42e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,3.29e-38,33;CL:0000047,3.29e-38,33;CL:0000031,3.29e-38,33;CL:0000404,3.29e-38,33;CL:0000117,2.70e-33,23;CL:0000337,2.70e-33,23;CL:0002319,3.81e-32,43;CL:0000221,3.35e-31,44;CL:0000133,3.35e-31,44;CL:0000393,5.84e-31,39;CL:0000211,5.84e-31,39;CL:0002321,3.43e-16,70;CL:0000723,1.67e-08,91;CL:0000048,1.67e-08,91;CL:0002609,4.46e-08,6;CL:0000107,8.79e-08,9;CL:0000034,1.65e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.52e-42!102;UBERON:0000924!2.52e-42!102;UBERON:0006601!2.52e-42!102;UBERON:0000073!4.04e-41!75;UBERON:0001016!4.04e-41!75;UBERON:0001017!6.63e-39!73;UBERON:0005743!6.63e-39!73;UBERON:0002346!4.97e-37!71;UBERON:0003075!4.97e-37!71;UBERON:0007284!4.97e-37!71;UBERON:0001049!3.00e-28!52;UBERON:0005068!3.00e-28!52;UBERON:0006241!3.00e-28!52;UBERON:0007135!3.00e-28!52;UBERON:0000033!3.95e-28!63;UBERON:0000955!5.52e-26!50;UBERON:0006238!5.52e-26!50;UBERON:0002616!2.48e-25!49;UBERON:0002020!4.25e-24!34;UBERON:0003056!6.67e-24!49;UBERON:0003080!1.80e-21!40;UBERON:0002780!7.84e-21!39;UBERON:0001890!7.84e-21!39;UBERON:0006240!7.84e-21!39;UBERON:0002791!3.39e-19!29;UBERON:0003528!3.39e-19!29;UBERON:0001893!3.39e-19!29;UBERON:0007811!5.19e-16!86;UBERON:0000153!4.39e-13!94;UBERON:0000956!5.26e-13!21;UBERON:0001869!5.26e-13!21;UBERON:0000203!5.26e-13!21;UBERON:0002619!1.49e-10!17;UBERON:0002021!1.76e-09!10;UBERON:0000411!1.76e-09!10;UBERON:0001950!1.76e-09!10;UBERON:0000010!1.94e-09!11;UBERON:0002410!1.42e-07!9;UBERON:0002420!1.82e-07!8;UBERON:0007245!1.82e-07!8;UBERON:0010009!1.82e-07!8;UBERON:0010011!1.82e-07!8;UBERON:0000454!1.82e-07!8;UBERON:0003076!3.20e-07!12;UBERON:0003057!3.20e-07!12;UBERON:0002240!9.77e-07!6;UBERON:0005174!9.77e-07!6;UBERON:0001137!9.77e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.48e-55,75;UBERON:0001017,2.08e-51,73;UBERON:0000073,4.89e-41,54;UBERON:0004121,1.34e-40,95;UBERON:0000924,1.34e-40,95;UBERON:0006601,1.34e-40,95;UBERON:0001049,1.10e-37,52;UBERON:0005068,1.10e-37,52;UBERON:0006241,1.10e-37,52;UBERON:0007135,1.10e-37,52;UBERON:0002020,1.18e-36,34;UBERON:0002346,7.07e-35,64;UBERON:0003075,7.07e-35,64;UBERON:0007284,7.07e-35,64;UBERON:0000955,7.21e-30,47;UBERON:0006238,7.21e-30,47;UBERON:0010371,3.60e-29,73;UBERON:0002616,7.70e-29,46;UBERON:0003528,1.95e-28,29;UBERON:0002791,1.95e-28,29;UBERON:0001893,1.95e-28,29;UBERON:0003080,7.60e-26,40;UBERON:0002780,8.03e-25,39;UBERON:0001890,8.03e-25,39;UBERON:0006240,8.03e-25,39;UBERON:0010314,8.32e-21,92;UBERON:0000956,8.29e-20,21;UBERON:0001869,8.29e-20,21;UBERON:0000203,8.29e-20,21;UBERON:0003056,1.37e-19,49;UBERON:0002619,1.19e-15,17;UBERON:0002021,4.60e-15,10;UBERON:0000411,4.60e-15,10;UBERON:0001950,4.60e-15,10;UBERON:0011216,4.13e-13,194;UBERON:0003076,5.43e-12,12;UBERON:0003057,5.43e-12,12;UBERON:0000025,1.78e-11,114;UBERON:0000010,1.04e-10,11;UBERON:0002240,2.13e-10,6;UBERON:0005174,2.13e-10,6;UBERON:0001137,2.13e-10,6;UBERON:0004111,4.55e-10,122;UBERON:0002420,1.20e-09,8;UBERON:0007245,1.20e-09,8;UBERON:0010009,1.20e-09,8;UBERON:0010011,1.20e-09,8;UBERON:0000454,1.20e-09,8;UBERON:0001948,1.61e-09,5;UBERON:0002315,1.61e-09,5;UBERON:0002410,8.79e-08,9;UBERON:0002950,1.87e-07,4;UBERON:0001891,1.87e-07,4;UBERON:0009616,1.87e-07,4;UBERON:0010286,1.87e-07,4|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,1.55534418462716,1.4850653216486,1.47227472945967,4.85606673486466,4.8591079009355,2.20483438586917,1.62937300731002,2.75765635983006,9.91042928994498,1.78762273319263,3.5329502648936,1.71452174049252,2.47016637726506,2.08365348222704,10.6089539620525,6.19038871034848,18.3357897332172,17.9723437138937,12.5287079103211,4.47358669980721,6.05809546665472,8.38844317185319,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.608930956624282,0.691846491768175,0.753613202763113,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,1.75668478206928,2.93225389538837,0,0,0,0,1.3481157546434,0.457500602818626,2.26177833803156,1.56441888173049,2.30143911597297,1.24672826735736,2.27137768294861,0,0,0,0.210441855886474,0,0.689706313300419,0.180062129805349,0.60281927134286,0.476255494059295,0.896796041993948,0.749613796477831,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.2071257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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2148 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:31599337..31599343,- | |||
|description=CAGE_peak_at_chr18:31599337..31599343,- | |||
|id=chr18:31599337..31599343,- | |||
|ontology_enrichment_celltype=CL:0000540!4.45e-27!33;CL:0000047!4.45e-27!33;CL:0000031!4.45e-27!33;CL:0000404!4.45e-27!33;CL:0000221!1.70e-21!44;CL:0000133!1.70e-21!44;CL:0002319!6.19e-21!43;CL:0000393!9.62e-21!39;CL:0000211!9.62e-21!39;CL:0000117!3.83e-20!23;CL:0000337!3.83e-20!23;CL:0000055!5.18e-16!50;CL:0002321!1.74e-08!70;CL:0000220!1.74e-08!70;CL:0000107!1.42e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.29e-38,33;CL:0000047,3.29e-38,33;CL:0000031,3.29e-38,33;CL:0000404,3.29e-38,33;CL:0000117,2.70e-33,23;CL:0000337,2.70e-33,23;CL:0002319,3.81e-32,43;CL:0000221,3.35e-31,44;CL:0000133,3.35e-31,44;CL:0000393,5.84e-31,39;CL:0000211,5.84e-31,39;CL:0002321,3.43e-16,70;CL:0000723,1.67e-08,91;CL:0000048,1.67e-08,91;CL:0002609,4.46e-08,6;CL:0000107,8.79e-08,9;CL:0000034,1.65e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.52e-42!102;UBERON:0000924!2.52e-42!102;UBERON:0006601!2.52e-42!102;UBERON:0000073!4.04e-41!75;UBERON:0001016!4.04e-41!75;UBERON:0001017!6.63e-39!73;UBERON:0005743!6.63e-39!73;UBERON:0002346!4.97e-37!71;UBERON:0003075!4.97e-37!71;UBERON:0007284!4.97e-37!71;UBERON:0001049!3.00e-28!52;UBERON:0005068!3.00e-28!52;UBERON:0006241!3.00e-28!52;UBERON:0007135!3.00e-28!52;UBERON:0000033!3.95e-28!63;UBERON:0000955!5.52e-26!50;UBERON:0006238!5.52e-26!50;UBERON:0002616!2.48e-25!49;UBERON:0002020!4.25e-24!34;UBERON:0003056!6.67e-24!49;UBERON:0003080!1.80e-21!40;UBERON:0002780!7.84e-21!39;UBERON:0001890!7.84e-21!39;UBERON:0006240!7.84e-21!39;UBERON:0002791!3.39e-19!29;UBERON:0003528!3.39e-19!29;UBERON:0001893!3.39e-19!29;UBERON:0007811!5.19e-16!86;UBERON:0000153!4.39e-13!94;UBERON:0000956!5.26e-13!21;UBERON:0001869!5.26e-13!21;UBERON:0000203!5.26e-13!21;UBERON:0002619!1.49e-10!17;UBERON:0002021!1.76e-09!10;UBERON:0000411!1.76e-09!10;UBERON:0001950!1.76e-09!10;UBERON:0000010!1.94e-09!11;UBERON:0002410!1.42e-07!9;UBERON:0002420!1.82e-07!8;UBERON:0007245!1.82e-07!8;UBERON:0010009!1.82e-07!8;UBERON:0010011!1.82e-07!8;UBERON:0000454!1.82e-07!8;UBERON:0003076!3.20e-07!12;UBERON:0003057!3.20e-07!12;UBERON:0002240!9.77e-07!6;UBERON:0005174!9.77e-07!6;UBERON:0001137!9.77e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.48e-55,75;UBERON:0001017,2.08e-51,73;UBERON:0000073,4.89e-41,54;UBERON:0004121,1.34e-40,95;UBERON:0000924,1.34e-40,95;UBERON:0006601,1.34e-40,95;UBERON:0001049,1.10e-37,52;UBERON:0005068,1.10e-37,52;UBERON:0006241,1.10e-37,52;UBERON:0007135,1.10e-37,52;UBERON:0002020,1.18e-36,34;UBERON:0002346,7.07e-35,64;UBERON:0003075,7.07e-35,64;UBERON:0007284,7.07e-35,64;UBERON:0000955,7.21e-30,47;UBERON:0006238,7.21e-30,47;UBERON:0010371,3.60e-29,73;UBERON:0002616,7.70e-29,46;UBERON:0003528,1.95e-28,29;UBERON:0002791,1.95e-28,29;UBERON:0001893,1.95e-28,29;UBERON:0003080,7.60e-26,40;UBERON:0002780,8.03e-25,39;UBERON:0001890,8.03e-25,39;UBERON:0006240,8.03e-25,39;UBERON:0010314,8.32e-21,92;UBERON:0000956,8.29e-20,21;UBERON:0001869,8.29e-20,21;UBERON:0000203,8.29e-20,21;UBERON:0003056,1.37e-19,49;UBERON:0002619,1.19e-15,17;UBERON:0002021,4.60e-15,10;UBERON:0000411,4.60e-15,10;UBERON:0001950,4.60e-15,10;UBERON:0011216,4.13e-13,194;UBERON:0003076,5.43e-12,12;UBERON:0003057,5.43e-12,12;UBERON:0000025,1.78e-11,114;UBERON:0000010,1.04e-10,11;UBERON:0002240,2.13e-10,6;UBERON:0005174,2.13e-10,6;UBERON:0001137,2.13e-10,6;UBERON:0004111,4.55e-10,122;UBERON:0002420,1.20e-09,8;UBERON:0007245,1.20e-09,8;UBERON:0010009,1.20e-09,8;UBERON:0010011,1.20e-09,8;UBERON:0000454,1.20e-09,8;UBERON:0001948,1.61e-09,5;UBERON:0002315,1.61e-09,5;UBERON:0002410,8.79e-08,9;UBERON:0002950,1.87e-07,4;UBERON:0001891,1.87e-07,4;UBERON:0009616,1.87e-07,4;UBERON:0010286,1.87e-07,4 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,1.55534418462716,1.4850653216486,1.47227472945967,4.85606673486466,4.8591079009355,2.20483438586917,1.62937300731002,2.75765635983006,9.91042928994498,1.78762273319263,3.5329502648936,1.71452174049252,2.47016637726506,2.08365348222704,10.6089539620525,6.19038871034848,18.3357897332172,17.9723437138937,12.5287079103211,4.47358669980721,6.05809546665472,8.38844317185319,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.608930956624282,0.691846491768175,0.753613202763113,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,1.75668478206928,2.93225389538837,0,0,0,0,1.3481157546434,0.457500602818626,2.26177833803156,1.56441888173049,2.30143911597297,1.24672826735736,2.27137768294861,0,0,0,0.210441855886474,0,0.689706313300419,0.180062129805349,0.60281927134286,0.476255494059295,0.896796041993948,0.749613796477831,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.9551876352064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.52375192569864,0,0,6.31016438832513,6.24701990874622,3.01592756825919,0.716906393857656,1.55959071857676,1.13230612315533,0.809621403349789,4.67609372658099,1.18586333383957,1.28528526568723,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,2.04263763452273,0,0.129358683782755,0.428674070063185,0,0.713475270408282,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0.596861720015682,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,2.29158205375759,2.40594455281163,4.11049511862385,3.0215755895588,2.70009000092722,3.15224842256954,3.17199686288943,5.69536342927002,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.367687016900028,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.512201219238954,0.287177344778066,0,0.695305955669133,0.38581844092741,0,0.294397840268795,1.02860775715625,1.06485483695602,0.476872379894642,1.16277133305863,0.282328141245992,0.676916863133412,0.365855945745545,1.05227884575137,0.814824683075171,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p@chr18:31599337..31599343,- | |||
}} |
Latest revision as of 15:05, 5 August 2015
Short description: | p@chr18:31599337..31599343, - |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:31599337..31599343, - |
Coexpression cluster: | MCL_coexpression_mm9:2148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.29e-38 | 33 |
neuronal stem cell | 3.29e-38 | 33 |
neuroblast | 3.29e-38 | 33 |
electrically signaling cell | 3.29e-38 | 33 |
CNS neuron (sensu Vertebrata) | 2.70e-33 | 23 |
neuroblast (sensu Vertebrata) | 2.70e-33 | 23 |
neural cell | 3.81e-32 | 43 |
ectodermal cell | 3.35e-31 | 44 |
neurectodermal cell | 3.35e-31 | 44 |
electrically responsive cell | 5.84e-31 | 39 |
electrically active cell | 5.84e-31 | 39 |
embryonic cell | 3.43e-16 | 70 |
somatic stem cell | 1.67e-08 | 91 |
multi fate stem cell | 1.67e-08 | 91 |
neuron of cerebral cortex | 4.46e-08 | 6 |
autonomic neuron | 8.79e-08 | 9 |
stem cell | 1.65e-07 | 97 |