FFCP PHASE1:Mm9::chr6:38613278..38613296,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=537|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:38613278..38613296,+|id=chr6:38613278..38613296,+|ontology_enrichment_celltype=CL:0000117!4.10e-17!23;CL:0000337!4.10e-17!23;CL:0000540!1.88e-12!33;CL:0000047!1.88e-12!33;CL:0000031!1.88e-12!33;CL:0000404!1.88e-12!33;CL:0000393!3.59e-09!39;CL:0000211!3.59e-09!39;CL:0000221!1.49e-08!44;CL:0000133!1.49e-08!44;CL:0002319!4.07e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.55e-25,23;CL:0000337,1.55e-25,23;CL:0000540,1.52e-16,33;CL:0000047,1.52e-16,33;CL:0000031,1.52e-16,33;CL:0000404,1.52e-16,33;CL:0000393,2.26e-13,39;CL:0000211,2.26e-13,39;CL:0002319,9.37e-12,43;CL:0000221,2.14e-11,44;CL:0000133,2.14e-11,44;CL:0002612,2.63e-08,3;CL:0002610,1.98e-07,3;CL:0002614,2.98e-07,3;CL:0000120,3.30e-07,3;CL:0002613,5.44e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.17e-25!52;UBERON:0005068!7.17e-25!52;UBERON:0006241!7.17e-25!52;UBERON:0007135!7.17e-25!52;UBERON:0001017!1.22e-24!73;UBERON:0005743!1.22e-24!73;UBERON:0000073!2.78e-24!75;UBERON:0001016!2.78e-24!75;UBERON:0000033!6.36e-23!63;UBERON:0002346!7.36e-23!71;UBERON:0003075!7.36e-23!71;UBERON:0007284!7.36e-23!71;UBERON:0002020!8.39e-23!34;UBERON:0000955!1.64e-22!50;UBERON:0006238!1.64e-22!50;UBERON:0002616!8.75e-22!49;UBERON:0004121!2.61e-20!102;UBERON:0000924!2.61e-20!102;UBERON:0006601!2.61e-20!102;UBERON:0002791!8.89e-18!29;UBERON:0003528!8.89e-18!29;UBERON:0001893!8.89e-18!29;UBERON:0003056!9.73e-18!49;UBERON:0003080!2.98e-17!40;UBERON:0002780!1.74e-16!39;UBERON:0001890!1.74e-16!39;UBERON:0006240!1.74e-16!39;UBERON:0007811!3.29e-12!86;UBERON:0000956!1.22e-11!21;UBERON:0001869!1.22e-11!21;UBERON:0000203!1.22e-11!21;UBERON:0000153!4.84e-11!94;UBERON:0002021!1.34e-10!10;UBERON:0000411!1.34e-10!10;UBERON:0001950!1.34e-10!10;UBERON:0002619!1.52e-09!17;UBERON:0003076!2.68e-08!12;UBERON:0003057!2.68e-08!12;UBERON:0002420!1.60e-07!8;UBERON:0007245!1.60e-07!8;UBERON:0010009!1.60e-07!8;UBERON:0010011!1.60e-07!8;UBERON:0000454!1.60e-07!8;UBERON:0002240!3.72e-07!6;UBERON:0005174!3.72e-07!6;UBERON:0001137!3.72e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.23e-43,54;UBERON:0001049,1.25e-39,52;UBERON:0005068,1.25e-39,52;UBERON:0006241,1.25e-39,52;UBERON:0007135,1.25e-39,52;UBERON:0001017,4.07e-39,73;UBERON:0001016,7.18e-38,75;UBERON:0002020,7.44e-35,34;UBERON:0002346,7.44e-31,64;UBERON:0003075,7.44e-31,64;UBERON:0007284,7.44e-31,64;UBERON:0004121,2.77e-28,95;UBERON:0000924,2.77e-28,95;UBERON:0006601,2.77e-28,95;UBERON:0002616,5.57e-28,46;UBERON:0000955,2.97e-27,47;UBERON:0006238,2.97e-27,47;UBERON:0010371,3.65e-26,73;UBERON:0003528,2.55e-24,29;UBERON:0002791,2.55e-24,29;UBERON:0001893,2.55e-24,29;UBERON:0002021,7.15e-23,10;UBERON:0000411,7.15e-23,10;UBERON:0001950,7.15e-23,10;UBERON:0003080,1.75e-22,40;UBERON:0002780,5.76e-21,39;UBERON:0001890,5.76e-21,39;UBERON:0006240,5.76e-21,39;UBERON:0010314,2.86e-19,92;UBERON:0003076,6.31e-19,12;UBERON:0003057,6.31e-19,12;UBERON:0003056,2.21e-17,49;UBERON:0002619,5.88e-15,17;UBERON:0002240,9.27e-15,6;UBERON:0005174,9.27e-15,6;UBERON:0001137,9.27e-15,6;UBERON:0000025,3.74e-14,114;UBERON:0000956,8.63e-14,21;UBERON:0001869,8.63e-14,21;UBERON:0000203,8.63e-14,21;UBERON:0001948,3.88e-13,5;UBERON:0002315,3.88e-13,5;UBERON:0004111,9.44e-13,122;UBERON:0002420,1.57e-12,8;UBERON:0007245,1.57e-12,8;UBERON:0010009,1.57e-12,8;UBERON:0010011,1.57e-12,8;UBERON:0000454,1.57e-12,8;UBERON:0011216,7.93e-10,194;UBERON:0002950,4.83e-09,4;UBERON:0001891,4.83e-09,4;UBERON:0009616,4.83e-09,4;UBERON:0010286,4.83e-09,4;UBERON:0002257,2.63e-08,3;UBERON:0004684,1.98e-07,3;UBERON:0002275,1.98e-07,3;UBERON:0002038,2.98e-07,3;UBERON:0009663,2.98e-07,3;UBERON:0009661,2.98e-07,3;UBERON:0000125,2.98e-07,3;UBERON:0002308,2.98e-07,3;UBERON:0000369,4.74e-07,5;UBERON:0002435,4.74e-07,5;UBERON:0000204,4.74e-07,5;UBERON:0010082,4.74e-07,5;UBERON:0000483,8.67e-07,174|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.841299845405528,10.8547374073445,9.49734726091938,0.489963196859816,0.287536413054709,0,2.20231761998777,3.19218345212969,2.61131106535614,1.45074916503213,1.73826522844578,3.12548022334056,4.4669279840221,1.68828783009504,1.98637722109853,5.89257170947335,6.12198227436143,3.91438836233131,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,2.63502717310392,3.97948742945565,0,0,0,0.127070227073065,2.09706895166752,0.457500602818626,2.1361239859187,1.73824320192276,2.81287003063364,1.45451631191692,2.27137768294861,0,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0.720248519221397,0.150704817835715,0.204109497453984,0.12811372028485,0,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,1.05144974282064,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.39913891117389,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,6.90487854760765,2.86447756719698,8.248952752497,6.16574267793578,3.0215755895588,4.05013500139084,2.2516060161211,4.53142408984205,1.03552062350364,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.962757628775446,0.505394423527595,0.760437899670719,0.377252682772152,0.37456602987953,0.192075457214608,0.0574354689556133,0,0.579421629724277,0.38581844092741,0.824171801606613,0.588795680537589,0,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.169229215783353,0.548783918618318,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,1.24905288968973,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p@chr6:38613278..38613296,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=537 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:38613278..38613296,+ | |||
|description=CAGE_peak_at_chr6:38613278..38613296,+ | |||
|id=chr6:38613278..38613296,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.10e-17!23;CL:0000337!4.10e-17!23;CL:0000540!1.88e-12!33;CL:0000047!1.88e-12!33;CL:0000031!1.88e-12!33;CL:0000404!1.88e-12!33;CL:0000393!3.59e-09!39;CL:0000211!3.59e-09!39;CL:0000221!1.49e-08!44;CL:0000133!1.49e-08!44;CL:0002319!4.07e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.55e-25,23;CL:0000337,1.55e-25,23;CL:0000540,1.52e-16,33;CL:0000047,1.52e-16,33;CL:0000031,1.52e-16,33;CL:0000404,1.52e-16,33;CL:0000393,2.26e-13,39;CL:0000211,2.26e-13,39;CL:0002319,9.37e-12,43;CL:0000221,2.14e-11,44;CL:0000133,2.14e-11,44;CL:0002612,2.63e-08,3;CL:0002610,1.98e-07,3;CL:0002614,2.98e-07,3;CL:0000120,3.30e-07,3;CL:0002613,5.44e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.17e-25!52;UBERON:0005068!7.17e-25!52;UBERON:0006241!7.17e-25!52;UBERON:0007135!7.17e-25!52;UBERON:0001017!1.22e-24!73;UBERON:0005743!1.22e-24!73;UBERON:0000073!2.78e-24!75;UBERON:0001016!2.78e-24!75;UBERON:0000033!6.36e-23!63;UBERON:0002346!7.36e-23!71;UBERON:0003075!7.36e-23!71;UBERON:0007284!7.36e-23!71;UBERON:0002020!8.39e-23!34;UBERON:0000955!1.64e-22!50;UBERON:0006238!1.64e-22!50;UBERON:0002616!8.75e-22!49;UBERON:0004121!2.61e-20!102;UBERON:0000924!2.61e-20!102;UBERON:0006601!2.61e-20!102;UBERON:0002791!8.89e-18!29;UBERON:0003528!8.89e-18!29;UBERON:0001893!8.89e-18!29;UBERON:0003056!9.73e-18!49;UBERON:0003080!2.98e-17!40;UBERON:0002780!1.74e-16!39;UBERON:0001890!1.74e-16!39;UBERON:0006240!1.74e-16!39;UBERON:0007811!3.29e-12!86;UBERON:0000956!1.22e-11!21;UBERON:0001869!1.22e-11!21;UBERON:0000203!1.22e-11!21;UBERON:0000153!4.84e-11!94;UBERON:0002021!1.34e-10!10;UBERON:0000411!1.34e-10!10;UBERON:0001950!1.34e-10!10;UBERON:0002619!1.52e-09!17;UBERON:0003076!2.68e-08!12;UBERON:0003057!2.68e-08!12;UBERON:0002420!1.60e-07!8;UBERON:0007245!1.60e-07!8;UBERON:0010009!1.60e-07!8;UBERON:0010011!1.60e-07!8;UBERON:0000454!1.60e-07!8;UBERON:0002240!3.72e-07!6;UBERON:0005174!3.72e-07!6;UBERON:0001137!3.72e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.23e-43,54;UBERON:0001049,1.25e-39,52;UBERON:0005068,1.25e-39,52;UBERON:0006241,1.25e-39,52;UBERON:0007135,1.25e-39,52;UBERON:0001017,4.07e-39,73;UBERON:0001016,7.18e-38,75;UBERON:0002020,7.44e-35,34;UBERON:0002346,7.44e-31,64;UBERON:0003075,7.44e-31,64;UBERON:0007284,7.44e-31,64;UBERON:0004121,2.77e-28,95;UBERON:0000924,2.77e-28,95;UBERON:0006601,2.77e-28,95;UBERON:0002616,5.57e-28,46;UBERON:0000955,2.97e-27,47;UBERON:0006238,2.97e-27,47;UBERON:0010371,3.65e-26,73;UBERON:0003528,2.55e-24,29;UBERON:0002791,2.55e-24,29;UBERON:0001893,2.55e-24,29;UBERON:0002021,7.15e-23,10;UBERON:0000411,7.15e-23,10;UBERON:0001950,7.15e-23,10;UBERON:0003080,1.75e-22,40;UBERON:0002780,5.76e-21,39;UBERON:0001890,5.76e-21,39;UBERON:0006240,5.76e-21,39;UBERON:0010314,2.86e-19,92;UBERON:0003076,6.31e-19,12;UBERON:0003057,6.31e-19,12;UBERON:0003056,2.21e-17,49;UBERON:0002619,5.88e-15,17;UBERON:0002240,9.27e-15,6;UBERON:0005174,9.27e-15,6;UBERON:0001137,9.27e-15,6;UBERON:0000025,3.74e-14,114;UBERON:0000956,8.63e-14,21;UBERON:0001869,8.63e-14,21;UBERON:0000203,8.63e-14,21;UBERON:0001948,3.88e-13,5;UBERON:0002315,3.88e-13,5;UBERON:0004111,9.44e-13,122;UBERON:0002420,1.57e-12,8;UBERON:0007245,1.57e-12,8;UBERON:0010009,1.57e-12,8;UBERON:0010011,1.57e-12,8;UBERON:0000454,1.57e-12,8;UBERON:0011216,7.93e-10,194;UBERON:0002950,4.83e-09,4;UBERON:0001891,4.83e-09,4;UBERON:0009616,4.83e-09,4;UBERON:0010286,4.83e-09,4;UBERON:0002257,2.63e-08,3;UBERON:0004684,1.98e-07,3;UBERON:0002275,1.98e-07,3;UBERON:0002038,2.98e-07,3;UBERON:0009663,2.98e-07,3;UBERON:0009661,2.98e-07,3;UBERON:0000125,2.98e-07,3;UBERON:0002308,2.98e-07,3;UBERON:0000369,4.74e-07,5;UBERON:0002435,4.74e-07,5;UBERON:0000204,4.74e-07,5;UBERON:0010082,4.74e-07,5;UBERON:0000483,8.67e-07,174 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.841299845405528,10.8547374073445,9.49734726091938,0.489963196859816,0.287536413054709,0,2.20231761998777,3.19218345212969,2.61131106535614,1.45074916503213,1.73826522844578,3.12548022334056,4.4669279840221,1.68828783009504,1.98637722109853,5.89257170947335,6.12198227436143,3.91438836233131,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,2.63502717310392,3.97948742945565,0,0,0,0.127070227073065,2.09706895166752,0.457500602818626,2.1361239859187,1.73824320192276,2.81287003063364,1.45451631191692,2.27137768294861,0,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0.720248519221397,0.150704817835715,0.204109497453984,0.12811372028485,0,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,1.05144974282064,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.39913891117389,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,6.90487854760765,2.86447756719698,8.248952752497,6.16574267793578,3.0215755895588,4.05013500139084,2.2516060161211,4.53142408984205,1.03552062350364,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.962757628775446,0.505394423527595,0.760437899670719,0.377252682772152,0.37456602987953,0.192075457214608,0.0574354689556133,0,0.579421629724277,0.38581844092741,0.824171801606613,0.588795680537589,0,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.169229215783353,0.548783918618318,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,1.24905288968973,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr6:38613278..38613296,+ | |||
}} |
Latest revision as of 16:03, 5 August 2015
Short description: | p@chr6:38613278..38613296, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:38613278..38613296, + |
Coexpression cluster: | MCL_coexpression_mm9:537 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.55e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.55e-25 | 23 |
neuron | 1.52e-16 | 33 |
neuronal stem cell | 1.52e-16 | 33 |
neuroblast | 1.52e-16 | 33 |
electrically signaling cell | 1.52e-16 | 33 |
electrically responsive cell | 2.26e-13 | 39 |
electrically active cell | 2.26e-13 | 39 |
neural cell | 9.37e-12 | 43 |
ectodermal cell | 2.14e-11 | 44 |
neurectodermal cell | 2.14e-11 | 44 |
neuron of the ventral spinal cord | 2.63e-08 | 3 |
raphe nuclei neuron | 1.98e-07 | 3 |
neuron of the substantia nigra | 2.98e-07 | 3 |
granule cell | 3.30e-07 | 3 |
striatum neuron | 5.44e-07 | 3 |