FFCP PHASE1:Hg19::chr19:49147890..49147907,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:49147890..49147907,- to FFCP PHASE1:Hg19::chr19:49147890..49147907,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=770 | |EntrezGene=770 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1370 | |HGNC=1370 | ||
|TSSclassifier=strong | |||
|UniProt=O75493 | |UniProt=O75493 | ||
|association_with_transcript=-63bp_to_AF050106_5end | |||
|cluster_id=chr19:49147890..49147907,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_12_at_CA11_5end | |||
|id=chr19:49147890..49147907,- | |||
|ontology_enrichment_celltype=CL:0002586!3.84e-09!3;CL:0000149!6.05e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.57e-10;2!CL:0000174;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.57e-10,2;CL:0000174,1.93e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;8.94e-20;1!DOID:4549;8.94e-20;1!DOID:5861;8.94e-20;1!DOID:6496;8.94e-20;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,8.95e-20,1;DOID:4549,8.95e-20,1;DOID:5861,8.95e-20,1;DOID:6496,8.95e-20,1 | |||
|ontology_enrichment_uberon=UBERON:0002346!5.34e-42!90;UBERON:0003075!1.20e-39!86;UBERON:0007284!1.20e-39!86;UBERON:0005743!6.84e-39!86;UBERON:0000073!1.64e-38!94;UBERON:0001016!1.64e-38!94;UBERON:0001869!8.24e-35!32;UBERON:0001893!1.81e-32!34;UBERON:0001017!3.33e-32!82;UBERON:0002020!4.22e-32!34;UBERON:0003528!4.22e-32!34;UBERON:0001049!1.11e-31!57;UBERON:0005068!1.11e-31!57;UBERON:0006241!1.11e-31!57;UBERON:0007135!1.11e-31!57;UBERON:0002619!3.13e-30!22;UBERON:0002791!3.51e-30!33;UBERON:0000956!1.39e-29!25;UBERON:0000203!1.39e-29!25;UBERON:0003056!2.06e-29!61;UBERON:0002780!1.18e-28!41;UBERON:0001890!1.18e-28!41;UBERON:0006240!1.18e-28!41;UBERON:0002616!5.77e-28!59;UBERON:0003080!7.70e-28!42;UBERON:0000955!2.21e-26!69;UBERON:0006238!2.21e-26!69;UBERON:0001950!1.69e-25!20;UBERON:0000924!8.14e-25!173;UBERON:0006601!8.14e-25!173;UBERON:0004121!5.68e-23!169;UBERON:0000033!5.48e-20!123;UBERON:0000153!1.24e-18!129;UBERON:0007811!1.24e-18!129;UBERON:0000200!2.05e-18!6;UBERON:0007023!2.88e-18!115;UBERON:0000349!6.35e-15!5;UBERON:0001871!1.86e-13!7;UBERON:0002771!4.32e-10!3;UBERON:0001781!3.84e-09!3;UBERON:0001782!3.84e-09!3;UBERON:0005424!3.84e-09!3;UBERON:0000966!4.07e-09!5;UBERON:0005388!4.07e-09!5;UBERON:0001802!4.07e-09!5;UBERON:0002420!7.62e-08!9;UBERON:0007245!7.62e-08!9;UBERON:0010009!7.62e-08!9;UBERON:0010011!7.62e-08!9;UBERON:0000454!7.62e-08!9;UBERON:0000064!1.73e-07!219;UBERON:0001870!2.90e-07!2;UBERON:0001876!5.71e-07!2;UBERON:0001954!6.60e-07!2;UBERON:0003022!6.60e-07!2;UBERON:0002421!6.60e-07!2;UBERON:0002600!6.60e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;9.67e-48;6!UBERON:0001950;2.56e-41;20!UBERON:0002619;1.01e-37;22!UBERON:0002771;1.42e-36;2!UBERON:0000956;2.33e-33;25!UBERON:0000203;2.33e-33;25!UBERON:0001893;2.32e-28;34!UBERON:0001869;5.48e-27;32!UBERON:0001871;1.33e-23;6!UBERON:0003528;5.55e-23;34!UBERON:0002020;5.55e-23;34!UBERON:0002791;7.85e-20;32!UBERON:0002022;1.42e-19;1!UBERON:0002581;3.25e-19;1!UBERON:0002902;3.25e-19;1!UBERON:0009899;3.25e-19;1!UBERON:0007190;3.25e-19;1!UBERON:0002780;9.77e-15;41!UBERON:0001890;9.77e-15;41!UBERON:0000073;6.58e-12;53!UBERON:0002616;6.58e-12;53!UBERON:0000955;1.54e-11;68!UBERON:0001017;2.27e-08;75!UBERON:0002418;1.82e-07;3!UBERON:0004755;1.82e-07;3!UBERON:0002369;1.93e-07;3!UBERON:0001235;1.93e-07;3!UBERON:0006858;1.93e-07;3!UBERON:0001870;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,1.77e-47,6;UBERON:0001950,2.20e-41,20;UBERON:0002619,8.84e-38,22;UBERON:0002771,1.42e-36,2;UBERON:0001869,3.63e-34,32;UBERON:0000956,2.07e-33,25;UBERON:0000203,2.07e-33,25;UBERON:0001893,3.36e-32,34;UBERON:0002780,8.67e-27,41;UBERON:0001890,8.67e-27,41;UBERON:0003080,8.67e-27,41;UBERON:0006240,8.67e-27,41;UBERON:0002791,2.68e-26,32;UBERON:0003528,8.71e-25,34;UBERON:0002020,8.71e-25,34;UBERON:0001871,1.06e-23,6;UBERON:0000073,9.16e-21,53;UBERON:0002616,9.16e-21,53;UBERON:0001049,1.18e-19,56;UBERON:0005068,1.18e-19,56;UBERON:0006241,1.18e-19,56;UBERON:0007135,1.18e-19,56;UBERON:0002022,1.56e-19,1;UBERON:0002902,2.25e-19,1;UBERON:0009899,2.25e-19,1;UBERON:0002581,4.69e-19,1;UBERON:0007190,5.62e-19,1;UBERON:0003056,4.88e-18,61;UBERON:0000955,6.24e-16,68;UBERON:0006238,6.24e-16,68;UBERON:0001017,2.28e-13,81;UBERON:0003075,2.28e-13,82;UBERON:0007284,2.28e-13,82;UBERON:0002346,9.85e-13,86;UBERON:0001016,5.14e-12,89;UBERON:0010371,1.82e-10,104;UBERON:0010314,2.25e-10,132;UBERON:0007023,1.34e-09,114;UBERON:0002418,1.82e-07,3;UBERON:0004755,1.82e-07,3;UBERON:0002369,1.93e-07,3;UBERON:0001235,1.93e-07,3;UBERON:0006858,1.93e-07,3;UBERON:0001870,2.79e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0.464775771478074,0,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0,0,0,0,9.79643006275653,0,0,0,1.58276989889697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,2.00473536971481,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.22026264901963,0.876336514945499,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50327341887344,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0.619678821295011,0.558644917973244,0,0,0,0,0,0.770750701157514,0,0.319267718114302,0.82046545696302,0,1.72893131160545,0.645902582527404,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.01306376927592,0,0,0.760989722326882,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,1.11813715056843,0,0,0,0,0,0,0,0,0.214429632529969,0,2.09234565662625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,1.76777874496378,0,0,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0.464775771478074,0,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0,0,0,0,9.79643006275653,0,0,0,1.58276989889697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,2.00473536971481,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.22026264901963,0.876336514945499,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50327341887344,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0.619678821295011,0.558644917973244,0,0,0,0,0,0.770750701157514,0,0.319267718114302,0.82046545696302,0,1.72893131160545,0.645902582527404,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.01306376927592,0,0,0.760989722326882,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,1.11813715056843,0,0,0,0,0,0,0,0,0.214429632529969,0,2.09234565662625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,1.76777874496378,0,0,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@CA11 | |||
}} | }} |
Latest revision as of 03:35, 19 September 2015
Short description: | p12@CA11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CA11_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -63bp_to_AF050106_5end |
EntrezGene: | CA11 |
HGNC: | 1370 |
UniProt: | O75493 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.57e-10 | 2 |
steroid hormone secreting cell | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.95e-20 | 1 |
extraosseous chondrosarcoma | 8.95e-20 | 1 |
myxoid chondrosarcoma | 8.95e-20 | 1 |
extraskeletal myxoid chondrosarcoma | 8.95e-20 | 1 |